RNA–Protein interactions for RNA: ENST00000507955.5

DDX41-208, Transcript of DEAD-box helicase 41, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX41, Length 2,607 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-208ENST00000507955 OC90Q02509 493 aaPredicted RBP12.9□□□□□ -0.34
DDX41-208ENST00000507955 ZP4Q12836 540 aa12.9□□□□□ -0.34
DDX41-208ENST00000507955 RAB11BQ15907 218 aa12.9□□□□□ -0.34
DDX41-208ENST00000507955 MOGAT2Q3SYC2 334 aa12.9□□□□□ -0.34
DDX41-208ENST00000507955 SPICQ8N5J4 248 aa12.9□□□□□ -0.34
DDX41-208ENST00000507955 SPACA5Q96QH8 159 aa12.9□□□□□ -0.34
DDX41-208ENST00000507955 UTP23Q9BRU9 249 aaKnown RBP12.9□□□□□ -0.34
DDX41-208ENST00000507955 GSX2Q9BZM3 304 aa12.9□□□□□ -0.34
DDX41-208ENST00000507955 ZNF224Q9NZL3 707 aa12.9□□□□□ -0.34
DDX41-208ENST00000507955 CDV3Q9UKY7 258 aaKnown RBP12.9□□□□□ -0.34
DDX41-208ENST00000507955 ETV7Q9Y603 341 aa12.9□□□□□ -0.34
DDX41-208ENST00000507955 D6RAR5 112 aa12.9□□□□□ -0.35
DDX41-208ENST00000507955 ZNF208O43345 1280 aa12.9□□□□□ -0.35
DDX41-208ENST00000507955 TPD52L2O43399 206 aaKnown RBP12.9□□□□□ -0.35
DDX41-208ENST00000507955 SIX6O95475 246 aa12.9□□□□□ -0.35
DDX41-208ENST00000507955 PSMA6P60900 246 aaKnown RBP12.9□□□□□ -0.35
DDX41-208ENST00000507955 RPS18P62269 152 aaKnown RBP12.9□□□□□ -0.35
DDX41-208ENST00000507955 RSPO4Q2I0M5 234 aaPredicted RBP12.9□□□□□ -0.35
DDX41-208ENST00000507955 ANKRD16Q6P6B7 361 aa12.9□□□□□ -0.35
DDX41-208ENST00000507955 DNM1P46Q6ZS02 220 aa12.9□□□□□ -0.35
DDX41-208ENST00000507955 ZNF627Q7L945 461 aa12.9□□□□□ -0.35
DDX41-208ENST00000507955 SLC25A28Q96A46 364 aa12.9□□□□□ -0.35
DDX41-208ENST00000507955 ZNF775Q96BV0 537 aaPredicted RBP12.9□□□□□ -0.35
DDX41-208ENST00000507955 FGGYQ96C11 551 aa12.9□□□□□ -0.35
DDX41-208ENST00000507955 SLAMF6Q96DU3 332 aa12.9□□□□□ -0.35
DDX41-208ENST00000507955 SDHAF3Q9NRP4 125 aa12.9□□□□□ -0.35
DDX41-208ENST00000507955 ALKBH4Q9NXW9 302 aa12.9□□□□□ -0.35
DDX41-208ENST00000507955 NUP50Q9UKX7 468 aa12.9□□□□□ -0.35
DDX41-208ENST00000507955 A6NIZ1 184 aa12.89□□□□□ -0.35
DDX41-208ENST00000507955 SLC17A2O00624 439 aa12.89□□□□□ -0.35
DDX41-208ENST00000507955 KLF7O75840 302 aaPredicted RBP12.89□□□□□ -0.35
DDX41-208ENST00000507955 CCL3P10147 92 aa12.89□□□□□ -0.35
DDX41-208ENST00000507955 CPN1P15169 458 aa12.89□□□□□ -0.35
DDX41-208ENST00000507955 DNASE1L1P49184 302 aa12.89□□□□□ -0.35
DDX41-208ENST00000507955 P2RY4P51582 365 aa12.89□□□□□ -0.35
DDX41-208ENST00000507955 PRKXP51817 358 aa12.89□□□□□ -0.35
DDX41-208ENST00000507955 MAP2K6P52564 334 aa12.89□□□□□ -0.35
DDX41-208ENST00000507955 RAP1BP61224 184 aa12.89□□□□□ -0.35
DDX41-208ENST00000507955 RAP1AP62834 184 aa12.89□□□□□ -0.35
DDX41-208ENST00000507955 NHLRC3Q5JS37 347 aa12.89□□□□□ -0.35
DDX41-208ENST00000507955 RTN4RL2Q86UN3 420 aa12.89□□□□□ -0.35
DDX41-208ENST00000507955 CDH24Q86UP0 819 aa12.89□□□□□ -0.35
DDX41-208ENST00000507955 UBALD2Q8IYN6 164 aa12.89□□□□□ -0.35
DDX41-208ENST00000507955 MEIOBQ8N635 442 aa12.89□□□□□ -0.35
DDX41-208ENST00000507955 OR4K17Q8NGC6 315 aa12.89□□□□□ -0.35
DDX41-208ENST00000507955 OR4D6Q8NGJ1 314 aa12.89□□□□□ -0.35
DDX41-208ENST00000507955 OR4C16Q8NGL9 310 aa12.89□□□□□ -0.35
DDX41-208ENST00000507955 ELP5Q8TE02 316 aa12.89□□□□□ -0.35
DDX41-208ENST00000507955 RNF138Q8WVD3 245 aa12.89□□□□□ -0.35
DDX41-208ENST00000507955 MRGPRX4Q96LA9 322 aa12.89□□□□□ -0.35
DDX41-208ENST00000507955 PTGES2Q9H7Z7 377 aa12.89□□□□□ -0.35
DDX41-208ENST00000507955 PRMT8Q9NR22 394 aaPredicted RBP12.89□□□□□ -0.35
DDX41-208ENST00000507955 RABL2AQ9UBK7 228 aaPredicted RBP12.89□□□□□ -0.35
DDX41-208ENST00000507955 RABL2BQ9UNT1 228 aa12.89□□□□□ -0.35
DDX41-208ENST00000507955 B3GALT5Q9Y2C3 310 aa12.89□□□□□ -0.35
DDX41-208ENST00000507955 TECTAO75443 2155 aa12.89□□□□□ -0.35
DDX41-208ENST00000507955 RBBP9O75884 186 aa12.89□□□□□ -0.35
DDX41-208ENST00000507955 DKK1O94907 266 aa12.89□□□□□ -0.35
DDX41-208ENST00000507955 OR2A4O95047 310 aa12.89□□□□□ -0.35
DDX41-208ENST00000507955 GIPP09681 153 aaPredicted RBP12.89□□□□□ -0.35
DDX41-208ENST00000507955 TDGF1P13385 188 aa12.89□□□□□ -0.35
DDX41-208ENST00000507955 HTR2CP28335 458 aa12.89□□□□□ -0.35
DDX41-208ENST00000507955 H2BFSP57053 126 aa12.89□□□□□ -0.35
DDX41-208ENST00000507955 CLRN1P58418 232 aa12.89□□□□□ -0.35
DDX41-208ENST00000507955 ZNF468Q5VIY5 522 aaPredicted RBP12.89□□□□□ -0.35
DDX41-208ENST00000507955 C5orf46Q6UWT4 87 aa12.89□□□□□ -0.35
DDX41-208ENST00000507955 DEFB123Q8N688 67 aa12.89□□□□□ -0.35
DDX41-208ENST00000507955 SLC22A8Q8TCC7 542 aa12.89□□□□□ -0.35
DDX41-208ENST00000507955 NAT6Q93015 286 aa12.89□□□□□ -0.35
DDX41-208ENST00000507955 FAM46BQ96A09 425 aa12.89□□□□□ -0.35
DDX41-208ENST00000507955 OR2A7Q96R45 310 aa12.89□□□□□ -0.35
DDX41-208ENST00000507955 MRPL13Q9BYD1 178 aaKnown RBP12.89□□□□□ -0.35
DDX41-208ENST00000507955 HHLA2Q9UM44 414 aa12.89□□□□□ -0.35
DDX41-208ENST00000507955 RER1O15258 196 aa12.88□□□□□ -0.35
DDX41-208ENST00000507955 LAMTOR5O43504 91 aa12.88□□□□□ -0.35
DDX41-208ENST00000507955 CREBL2O60519 120 aaPredicted RBP12.88□□□□□ -0.35
DDX41-208ENST00000507955 CD3DP04234 171 aa12.88□□□□□ -0.35
DDX41-208ENST00000507955 CD2P06729 351 aa12.88□□□□□ -0.35
DDX41-208ENST00000507955 GNALP38405 381 aa12.88□□□□□ -0.35
DDX41-208ENST00000507955 MNDAP41218 407 aa12.88□□□□□ -0.35
DDX41-208ENST00000507955 MECP2P51608 486 aaKnown RBP12.88□□□□□ -0.35
DDX41-208ENST00000507955 SUMO3P55854 103 aaPredicted RBP12.88□□□□□ -0.35
DDX41-208ENST00000507955 GFOD2Q3B7J2 385 aa12.88□□□□□ -0.35
DDX41-208ENST00000507955 FAM166AQ6J272 317 aa12.88□□□□□ -0.35
DDX41-208ENST00000507955 SLC36A1Q7Z2H8 476 aa12.88□□□□□ -0.35
DDX41-208ENST00000507955 UEVLDQ8IX04 471 aa12.88□□□□□ -0.35
DDX41-208ENST00000507955 LOC100289279A0A1B0GTE1 492 aa12.88□□□□□ -0.35
DDX41-208ENST00000507955 MCRIP1C9JLW8 97 aa12.88□□□□□ -0.35
DDX41-208ENST00000507955 ACSM4P0C7M7 580 aa12.88□□□□□ -0.35
DDX41-208ENST00000507955 FGF5P12034 268 aa12.88□□□□□ -0.35
DDX41-208ENST00000507955 NAGAP17050 411 aa12.88□□□□□ -0.35
DDX41-208ENST00000507955 IGFBP3P17936 291 aaPredicted RBP12.88□□□□□ -0.35
DDX41-208ENST00000507955 B3GNTL1Q67FW5 361 aaPredicted RBP12.88□□□□□ -0.35
DDX41-208ENST00000507955 C3orf33Q6P1S2 294 aa12.88□□□□□ -0.35
DDX41-208ENST00000507955 FAM198BQ6UWH4 519 aa12.88□□□□□ -0.35
DDX41-208ENST00000507955 ZNF454Q8N9F8 522 aa12.88□□□□□ -0.35
DDX41-208ENST00000507955 OR10H5Q8NGA6 315 aa12.88□□□□□ -0.35
DDX41-208ENST00000507955 CMBLQ96DG6 245 aa12.88□□□□□ -0.35
DDX41-208ENST00000507955 ADAT3Q96EY9 351 aaPredicted RBP12.88□□□□□ -0.35
DDX41-208ENST00000507955 CXorf58Q96LI9 332 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms