RNA–Protein interactions for RNA: ENST00000507784.5

RNF4-209, Transcript of ring finger protein 4, humanhuman

TSL 2

Gene RNF4, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-209ENST00000507784 NBEAQ8NFP9 2946 aa15.24■□□□□ 0.03
RNF4-209ENST00000507784 TRBV2A0A0J9YWF9 115 aa15.24■□□□□ 0.03
RNF4-209ENST00000507784 IQCMA0A1B0GVH7 501 aa15.24■□□□□ 0.03
RNF4-209ENST00000507784 ZNF503-AS2A6NEH8 195 aa15.24■□□□□ 0.03
RNF4-209ENST00000507784 FAM90A27PA6NNH2 459 aa15.24■□□□□ 0.03
RNF4-209ENST00000507784 H3BSA7 217 aa15.24■□□□□ 0.03
RNF4-209ENST00000507784 AGFG2O95081 481 aa15.24■□□□□ 0.03
RNF4-209ENST00000507784 CPEP16870 476 aa15.24■□□□□ 0.03
RNF4-209ENST00000507784 CHRNB4P30926 498 aa15.24■□□□□ 0.03
RNF4-209ENST00000507784 CX3CR1P49238 355 aa15.24■□□□□ 0.03
RNF4-209ENST00000507784 RGS6P49758 472 aa15.24■□□□□ 0.03
RNF4-209ENST00000507784 BDH1Q02338 343 aa15.24■□□□□ 0.03
RNF4-209ENST00000507784 FAM27E3Q08E93 113 aa15.24■□□□□ 0.03
RNF4-209ENST00000507784 ECH1Q13011 328 aa15.24■□□□□ 0.03
RNF4-209ENST00000507784 TPBGQ13641 420 aa15.24■□□□□ 0.03
RNF4-209ENST00000507784 ALKBH1Q13686 389 aaKnown RBP15.24■□□□□ 0.03
RNF4-209ENST00000507784 ZNF829Q3KNS6 432 aaPredicted RBP15.24■□□□□ 0.03
RNF4-209ENST00000507784 SOWAHCQ53LP3 525 aaPredicted RBP15.24■□□□□ 0.03
RNF4-209ENST00000507784 STAC2Q6ZMT1 411 aa15.24■□□□□ 0.03
RNF4-209ENST00000507784 MDP1Q86V88 176 aa15.24■□□□□ 0.03
RNF4-209ENST00000507784 HAVCR2Q8TDQ0 301 aa15.24■□□□□ 0.03
RNF4-209ENST00000507784 SLC7A6Q92536 515 aa15.24■□□□□ 0.03
RNF4-209ENST00000507784 SPTSSAQ969W0 71 aa15.24■□□□□ 0.03
RNF4-209ENST00000507784 YIPF6Q96EC8 236 aa15.24■□□□□ 0.03
RNF4-209ENST00000507784 CCDC120Q96HB5 630 aa15.24■□□□□ 0.03
RNF4-209ENST00000507784 C1QTNF6Q9BXI9 259 aa15.24■□□□□ 0.03
RNF4-209ENST00000507784 NIPAL2Q9H841 368 aa15.24■□□□□ 0.03
RNF4-209ENST00000507784 NOX3Q9HBY0 568 aa15.24■□□□□ 0.03
RNF4-209ENST00000507784 ST6GALNAC2Q9UJ37 374 aa15.24■□□□□ 0.03
RNF4-209ENST00000507784 R4GMQ9 66 aa15.24■□□□□ 0.03
RNF4-209ENST00000507784 TMEM269A0A1B0GVZ9 245 aa15.23■□□□□ 0.03
RNF4-209ENST00000507784 LOC110117498-PIK3R3F6TDL0 507 aa15.23■□□□□ 0.03
RNF4-209ENST00000507784 OGG1O15527 345 aa15.23■□□□□ 0.03
RNF4-209ENST00000507784 SYNGR3O43761 229 aa15.23■□□□□ 0.03
RNF4-209ENST00000507784 TGM4P49221 684 aa15.23■□□□□ 0.03
RNF4-209ENST00000507784 MFGE8Q08431 387 aaPredicted RBP15.23■□□□□ 0.03
RNF4-209ENST00000507784 SSX1Q16384 188 aa15.23■□□□□ 0.03
RNF4-209ENST00000507784 CCDC58Q4VC31 144 aa15.23■□□□□ 0.03
RNF4-209ENST00000507784 C4orf17Q53FE4 359 aa15.23■□□□□ 0.03
RNF4-209ENST00000507784 ALKBH2Q6NS38 261 aa15.23■□□□□ 0.03
RNF4-209ENST00000507784 MTFR2Q6P444 385 aa15.23■□□□□ 0.03
RNF4-209ENST00000507784 RHOUQ7L0Q8 258 aa15.23■□□□□ 0.03
RNF4-209ENST00000507784 C17orf78Q8N4C9 275 aa15.23■□□□□ 0.03
RNF4-209ENST00000507784 WDR31Q8NA23 367 aa15.23■□□□□ 0.03
RNF4-209ENST00000507784 STEAP2Q8NFT2 490 aa15.23■□□□□ 0.03
RNF4-209ENST00000507784 COQ7Q99807 217 aa15.23■□□□□ 0.03
RNF4-209ENST00000507784 FUNDC2Q9BWH2 189 aa15.23■□□□□ 0.03
RNF4-209ENST00000507784 DDX28Q9NUL7 540 aaKnown RBP15.23■□□□□ 0.03
RNF4-209ENST00000507784 B3GNT2Q9NY97 397 aa15.23■□□□□ 0.03
RNF4-209ENST00000507784 JKAMPQ9P055 326 aa15.23■□□□□ 0.03
RNF4-209ENST00000507784 AMDHD2Q9Y303 409 aa15.23■□□□□ 0.03
RNF4-209ENST00000507784 SPTA1P02549 2419 aa15.23■□□□□ 0.03
RNF4-209ENST00000507784 ARPC4-TTLL3A0A0A6YYG9 625 aa15.22■□□□□ 0.03
RNF4-209ENST00000507784 PNPP00491 289 aa15.22■□□□□ 0.03
RNF4-209ENST00000507784 APOC1P02654 83 aa15.22■□□□□ 0.03
RNF4-209ENST00000507784 ANXA2P07355 339 aaKnown RBP15.22■□□□□ 0.03
RNF4-209ENST00000507784 DBHP09172 617 aa15.22■□□□□ 0.03
RNF4-209ENST00000507784 CCNOP22674 350 aa15.22■□□□□ 0.03
RNF4-209ENST00000507784 NR4A1P22736 598 aa15.22■□□□□ 0.03
RNF4-209ENST00000507784 APEX1P27695 318 aaKnown RBP15.22■□□□□ 0.03
RNF4-209ENST00000507784 TGFBR2P37173 567 aa15.22■□□□□ 0.03
RNF4-209ENST00000507784 SLC6A9P48067 706 aa15.22■□□□□ 0.03
RNF4-209ENST00000507784 GDI2P50395 445 aaKnown RBP15.22■□□□□ 0.03
RNF4-209ENST00000507784 TPTEP56180 551 aa15.22■□□□□ 0.03
RNF4-209ENST00000507784 NANOS3P60323 173 aaKnown RBP15.22■□□□□ 0.03
RNF4-209ENST00000507784 RPS25P62851 125 aaKnown RBP15.22■□□□□ 0.03
RNF4-209ENST00000507784 CDK5R1Q15078 307 aa15.22■□□□□ 0.03
RNF4-209ENST00000507784 ODF4Q2M2E3 257 aa15.22■□□□□ 0.03
RNF4-209ENST00000507784 SLC25A35Q3KQZ1 300 aa15.22■□□□□ 0.03
RNF4-209ENST00000507784 PHC2Q8IXK0 858 aa15.22■□□□□ 0.03
RNF4-209ENST00000507784 CPEB3Q8NE35 698 aaKnown RBP15.22■□□□□ 0.03
RNF4-209ENST00000507784 OR2G2Q8NGZ5 317 aa15.22■□□□□ 0.03
RNF4-209ENST00000507784 HSD17B8Q92506 261 aa15.22■□□□□ 0.03
RNF4-209ENST00000507784 TMEM203Q969S6 136 aa15.22■□□□□ 0.03
RNF4-209ENST00000507784 PPP1R14AQ96A00 147 aa15.22■□□□□ 0.03
RNF4-209ENST00000507784 S100PBPQ96BU1 408 aa15.22■□□□□ 0.03
RNF4-209ENST00000507784 TMED9Q9BVK6 235 aa15.22■□□□□ 0.03
RNF4-209ENST00000507784 FRRS1LQ9P0K9 344 aa15.22■□□□□ 0.03
RNF4-209ENST00000507784 OR52A1Q9UKL2 312 aa15.22■□□□□ 0.03
RNF4-209ENST00000507784 SLC22A13Q9Y226 551 aa15.22■□□□□ 0.03
RNF4-209ENST00000507784 OR6C6A6NF89 314 aa15.21■□□□□ 0.03
RNF4-209ENST00000507784 OR5H1A6NKK0 313 aa15.21■□□□□ 0.03
RNF4-209ENST00000507784 C16orf97H3BN30 126 aa15.21■□□□□ 0.03
RNF4-209ENST00000507784 M0R135 149 aa15.21■□□□□ 0.03
RNF4-209ENST00000507784 NOL3O60936 208 aaKnown RBP15.21■□□□□ 0.03
RNF4-209ENST00000507784 SLC2A1P11166 492 aa15.21■□□□□ 0.03
RNF4-209ENST00000507784 PSMB1P20618 241 aaKnown RBP15.21■□□□□ 0.03
RNF4-209ENST00000507784 GADD45AP24522 165 aa15.21■□□□□ 0.03
RNF4-209ENST00000507784 DCTDP32321 178 aa15.21■□□□□ 0.03
RNF4-209ENST00000507784 APLNRP35414 380 aa15.21■□□□□ 0.03
RNF4-209ENST00000507784 ASCL1P50553 236 aa15.21■□□□□ 0.03
RNF4-209ENST00000507784 ZNF121P58317 390 aaPredicted RBP15.21■□□□□ 0.03
RNF4-209ENST00000507784 GPR50Q13585 617 aa15.21■□□□□ 0.03
RNF4-209ENST00000507784 WDR38Q5JTN6 314 aa15.21■□□□□ 0.03
RNF4-209ENST00000507784 BCL2L15Q5TBC7 163 aa15.21■□□□□ 0.03
RNF4-209ENST00000507784 DMKNQ6E0U4 476 aaPredicted RBP15.21■□□□□ 0.03
RNF4-209ENST00000507784 FAM57BQ71RH2 274 aa15.21■□□□□ 0.03
RNF4-209ENST00000507784 NAA40Q86UY6 237 aa15.21■□□□□ 0.03
RNF4-209ENST00000507784 CATSPERDQ86XM0 798 aa15.21■□□□□ 0.03
RNF4-209ENST00000507784 PRSS35Q8N3Z0 413 aa15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms