RNA–Protein interactions for RNA: ENST00000506880.5

PDGFC-205, Transcript of platelet derived growth factor C, humanhuman

TSL 2

Gene PDGFC, Length 1,014 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-205ENST00000506880 IGLV3-9A0A075B6K5 115 aa7.32□□□□□ -1.24
PDGFC-205ENST00000506880 H7C1C5 153 aa7.32□□□□□ -1.24
PDGFC-205ENST00000506880 H7C417 338 aa7.32□□□□□ -1.24
PDGFC-205ENST00000506880 IFNL4K9M1U5 179 aa7.32□□□□□ -1.24
PDGFC-205ENST00000506880 DLGAP1O14490 977 aa7.32□□□□□ -1.24
PDGFC-205ENST00000506880 SIAH2O43255 324 aa7.32□□□□□ -1.24
PDGFC-205ENST00000506880 XRCC2O43543 280 aa7.32□□□□□ -1.24
PDGFC-205ENST00000506880 PRKYO43930 277 aa7.32□□□□□ -1.24
PDGFC-205ENST00000506880 MRPS14O60783 128 aaKnown RBP7.32□□□□□ -1.24
PDGFC-205ENST00000506880 ATP6V1G2O95670 118 aa7.32□□□□□ -1.24
PDGFC-205ENST00000506880 ADH4P08319 380 aa7.32□□□□□ -1.24
PDGFC-205ENST00000506880 TACSTD2P09758 323 aa7.32□□□□□ -1.24
PDGFC-205ENST00000506880 SBK2P0C263 348 aa7.32□□□□□ -1.24
PDGFC-205ENST00000506880 RAC2P15153 192 aa7.32□□□□□ -1.24
PDGFC-205ENST00000506880 GABRB1P18505 474 aa7.32□□□□□ -1.24
PDGFC-205ENST00000506880 ALOX5APP20292 161 aa7.32□□□□□ -1.24
PDGFC-205ENST00000506880 DCKP27707 260 aa7.32□□□□□ -1.24
PDGFC-205ENST00000506880 TTKP33981 857 aa7.32□□□□□ -1.24
PDGFC-205ENST00000506880 PPOXP50336 477 aa7.32□□□□□ -1.24
PDGFC-205ENST00000506880 MMP16P51512 607 aa7.32□□□□□ -1.24
PDGFC-205ENST00000506880 LCN6P62502 163 aa7.32□□□□□ -1.24
PDGFC-205ENST00000506880 MRPS11P82912 194 aaKnown RBP7.32□□□□□ -1.24
PDGFC-205ENST00000506880 MZT1Q08AG7 82 aa7.32□□□□□ -1.24
PDGFC-205ENST00000506880 MALLQ13021 153 aa7.32□□□□□ -1.24
PDGFC-205ENST00000506880 APOFQ13790 326 aa7.32□□□□□ -1.24
PDGFC-205ENST00000506880 RAB39AQ14964 217 aa7.32□□□□□ -1.24
PDGFC-205ENST00000506880 TSC22D1Q15714 1073 aa7.32□□□□□ -1.24
PDGFC-205ENST00000506880 ZNF829Q3KNS6 432 aaPredicted RBP7.32□□□□□ -1.24
PDGFC-205ENST00000506880 PCGF3Q3KNV8 242 aa7.32□□□□□ -1.24
PDGFC-205ENST00000506880 RNLSQ5VYX0 342 aa7.32□□□□□ -1.24
PDGFC-205ENST00000506880 FBXW12Q6X9E4 464 aa7.32□□□□□ -1.24
PDGFC-205ENST00000506880 PLEKHG7Q6ZR37 379 aa7.32□□□□□ -1.24
PDGFC-205ENST00000506880 C22orf34Q6ZV56 151 aa7.32□□□□□ -1.24
PDGFC-205ENST00000506880 USP51Q70EK9 711 aa7.32□□□□□ -1.24
PDGFC-205ENST00000506880 KRT74Q7RTS7 529 aa7.32□□□□□ -1.24
PDGFC-205ENST00000506880 ZNF584Q8IVC4 421 aa7.32□□□□□ -1.24
PDGFC-205ENST00000506880 ZNF679Q8IYX0 411 aa7.32□□□□□ -1.24
PDGFC-205ENST00000506880 LRRC18Q8N456 261 aa7.32□□□□□ -1.24
PDGFC-205ENST00000506880 IQCF1Q8N6M8 205 aa7.32□□□□□ -1.24
PDGFC-205ENST00000506880 CPEB3Q8NE35 698 aaKnown RBP7.32□□□□□ -1.24
PDGFC-205ENST00000506880 ST7LQ8TDW4 575 aa7.32□□□□□ -1.24
PDGFC-205ENST00000506880 FBLIM1Q8WUP2 373 aa7.32□□□□□ -1.24
PDGFC-205ENST00000506880 TMEM171Q8WVE6 324 aa7.32□□□□□ -1.24
PDGFC-205ENST00000506880 IGFBPL1Q8WX77 278 aa7.32□□□□□ -1.24
PDGFC-205ENST00000506880 TFAP2CQ92754 450 aa7.32□□□□□ -1.24
PDGFC-205ENST00000506880 TRMT61AQ96FX7 289 aaKnown RBP7.32□□□□□ -1.24
PDGFC-205ENST00000506880 ZC3HAV1LQ96H79 300 aaKnown RBP7.32□□□□□ -1.24
PDGFC-205ENST00000506880 C4orf45Q96LM5 186 aa7.32□□□□□ -1.24
PDGFC-205ENST00000506880 MBOAT4Q96T53 435 aa7.32□□□□□ -1.24
PDGFC-205ENST00000506880 GSX2Q9BZM3 304 aa7.32□□□□□ -1.24
PDGFC-205ENST00000506880 OR51V1Q9H2C8 321 aa7.32□□□□□ -1.24
PDGFC-205ENST00000506880 PLK3Q9H4B4 646 aa7.32□□□□□ -1.24
PDGFC-205ENST00000506880 NOX3Q9HBY0 568 aa7.32□□□□□ -1.24
PDGFC-205ENST00000506880 PLCXD1Q9NUJ7 323 aa7.32□□□□□ -1.24
PDGFC-205ENST00000506880 ZNF701Q9NV72 531 aaPredicted RBP7.32□□□□□ -1.24
PDGFC-205ENST00000506880 LAMP5Q9UJQ1 280 aa7.32□□□□□ -1.24
PDGFC-205ENST00000506880 HRNRQ86YZ3 2850 aaPredicted RBP7.32□□□□□ -1.24
PDGFC-205ENST00000506880 CHD3Q12873 2000 aaKnown RBP7.32□□□□□ -1.24
PDGFC-205ENST00000506880 A0A0U1RQV5 110 aa7.31□□□□□ -1.24
PDGFC-205ENST00000506880 LOC390937A0A1W2PQ73 354 aa7.31□□□□□ -1.24
PDGFC-205ENST00000506880 CCDC182A6NF36 153 aa7.31□□□□□ -1.24
PDGFC-205ENST00000506880 EFCAB10A6NFE3 127 aa7.31□□□□□ -1.24
PDGFC-205ENST00000506880 ZNF670-ZNF695F2Z2N8 137 aa7.31□□□□□ -1.24
PDGFC-205ENST00000506880 OVOL3O00110 214 aa7.31□□□□□ -1.24
PDGFC-205ENST00000506880 MITFO75030 526 aaPredicted RBP7.31□□□□□ -1.24
PDGFC-205ENST00000506880 ATE1O95260 518 aa7.31□□□□□ -1.24
PDGFC-205ENST00000506880 ABHD16AO95870 558 aa7.31□□□□□ -1.24
PDGFC-205ENST00000506880 IGHV3-13P01766 116 aa7.31□□□□□ -1.24
PDGFC-205ENST00000506880 IGFBP1P08833 259 aaPredicted RBP7.31□□□□□ -1.24
PDGFC-205ENST00000506880 CCDC159P0C7I6 412 aa7.31□□□□□ -1.24
PDGFC-205ENST00000506880 DANCRP0C864 163 aa7.31□□□□□ -1.24
PDGFC-205ENST00000506880 ZNF12P17014 697 aa7.31□□□□□ -1.24
PDGFC-205ENST00000506880 KITLGP21583 273 aa7.31□□□□□ -1.24
PDGFC-205ENST00000506880 CPT2P23786 658 aa7.31□□□□□ -1.24
PDGFC-205ENST00000506880 EPHA2P29317 976 aa7.31□□□□□ -1.24
PDGFC-205ENST00000506880 SERPINF1P36955 418 aa7.31□□□□□ -1.24
PDGFC-205ENST00000506880 OPRL1P41146 370 aa7.31□□□□□ -1.24
PDGFC-205ENST00000506880 DSCR9P59020 149 aa7.31□□□□□ -1.24
PDGFC-205ENST00000506880 RPS7P62081 194 aaKnown RBP7.31□□□□□ -1.24
PDGFC-205ENST00000506880 SNRPD2P62316 118 aaKnown RBP7.31□□□□□ -1.24
PDGFC-205ENST00000506880 KLHL12Q53G59 568 aa7.31□□□□□ -1.24
PDGFC-205ENST00000506880 CCDC92Q53HC0 331 aaPredicted RBP7.31□□□□□ -1.24
PDGFC-205ENST00000506880 ZBTB37Q5TC79 503 aa7.31□□□□□ -1.24
PDGFC-205ENST00000506880 TMEM236Q5W0B7 351 aa7.31□□□□□ -1.24
PDGFC-205ENST00000506880 RGS7BPQ6MZT1 257 aaPredicted RBP7.31□□□□□ -1.24
PDGFC-205ENST00000506880 DPY19L4Q7Z388 723 aa7.31□□□□□ -1.24
PDGFC-205ENST00000506880 DCXRQ7Z4W1 244 aa7.31□□□□□ -1.24
PDGFC-205ENST00000506880 THAP5Q7Z6K1 395 aa7.31□□□□□ -1.24
PDGFC-205ENST00000506880 HIST2H2ABQ8IUE6 130 aaPredicted RBP7.31□□□□□ -1.24
PDGFC-205ENST00000506880 ERI1Q8IV48 349 aaKnown RBP7.31□□□□□ -1.24
PDGFC-205ENST00000506880 SYS1Q8N2H4 156 aa7.31□□□□□ -1.24
PDGFC-205ENST00000506880 MUC15Q8N387 334 aa7.31□□□□□ -1.24
PDGFC-205ENST00000506880 ACBD7Q8N6N7 88 aa7.31□□□□□ -1.24
PDGFC-205ENST00000506880 OR9Q1Q8NGQ5 310 aa7.31□□□□□ -1.24
PDGFC-205ENST00000506880 OR6N2Q8NGY6 317 aa7.31□□□□□ -1.24
PDGFC-205ENST00000506880 SMAP2Q8WU79 429 aaPredicted RBP7.31□□□□□ -1.24
PDGFC-205ENST00000506880 NEU4Q8WWR8 484 aaPredicted RBP7.31□□□□□ -1.24
PDGFC-205ENST00000506880 AKAP1Q92667 903 aaKnown RBP eCLIP7.31□□□□□ -1.24
PDGFC-205ENST00000506880 MRPL24Q96A35 216 aaKnown RBP7.31□□□□□ -1.24
PDGFC-205ENST00000506880 C10orf35Q96D05 121 aa7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms