RNA–Protein interactions for RNA: ENST00000506632.2

PDLIM5-209, Transcript of PDZ and LIM domain 5, humanhuman

TSL 3

Gene PDLIM5, Length 907 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-209ENST00000506632 Q6ZR03 302 aa7.69□□□□□ -1.18
PDLIM5-209ENST00000506632 GLCCI1Q86VQ1 547 aa7.69□□□□□ -1.18
PDLIM5-209ENST00000506632 SLC26A10Q8NG04 563 aa7.69□□□□□ -1.18
PDLIM5-209ENST00000506632 OR4K13Q8NH42 304 aa7.69□□□□□ -1.18
PDLIM5-209ENST00000506632 GNPDA2Q8TDQ7 276 aa7.69□□□□□ -1.18
PDLIM5-209ENST00000506632 TMEM158Q8WZ71 300 aa7.69□□□□□ -1.18
PDLIM5-209ENST00000506632 TMEM186Q96B77 213 aa7.69□□□□□ -1.18
PDLIM5-209ENST00000506632 HAVCR1Q96D42 359 aa7.69□□□□□ -1.18
PDLIM5-209ENST00000506632 NSL1Q96IY1 281 aa7.69□□□□□ -1.18
PDLIM5-209ENST00000506632 COG8Q96MW5 612 aa7.69□□□□□ -1.18
PDLIM5-209ENST00000506632 DCLRE1CQ96SD1 692 aaKnown RBP7.69□□□□□ -1.18
PDLIM5-209ENST00000506632 DIRC2Q96SL1 478 aa7.69□□□□□ -1.18
PDLIM5-209ENST00000506632 COQ7Q99807 217 aa7.69□□□□□ -1.18
PDLIM5-209ENST00000506632 IFT27Q9BW83 186 aa7.69□□□□□ -1.18
PDLIM5-209ENST00000506632 TRIM15Q9C019 465 aa7.69□□□□□ -1.18
PDLIM5-209ENST00000506632 HDHD2Q9H0R4 259 aa7.69□□□□□ -1.18
PDLIM5-209ENST00000506632 RERGLQ9H628 205 aa7.69□□□□□ -1.18
PDLIM5-209ENST00000506632 MAGIXQ9H6Y5 334 aa7.69□□□□□ -1.18
PDLIM5-209ENST00000506632 ZNF665Q9H7R5 613 aa7.69□□□□□ -1.18
PDLIM5-209ENST00000506632 MSL2Q9HCI7 577 aa7.69□□□□□ -1.18
PDLIM5-209ENST00000506632 IL20Q9NYY1 176 aa7.69□□□□□ -1.18
PDLIM5-209ENST00000506632 PURGQ9UJV8 347 aaKnown RBP7.69□□□□□ -1.18
PDLIM5-209ENST00000506632 TMCC3Q9ULS5 477 aa7.69□□□□□ -1.18
PDLIM5-209ENST00000506632 GRIP1Q9Y3R0 1128 aa7.69□□□□□ -1.18
PDLIM5-209ENST00000506632 WIPI2Q9Y4P8 454 aa7.69□□□□□ -1.18
PDLIM5-209ENST00000506632 CDH10Q9Y6N8 788 aa7.69□□□□□ -1.18
PDLIM5-209ENST00000506632 OR6C68A6NDL8 312 aa7.68□□□□□ -1.18
PDLIM5-209ENST00000506632 BHLHE40O14503 412 aa7.68□□□□□ -1.18
PDLIM5-209ENST00000506632 TIMM8AO60220 97 aaPredicted RBP7.68□□□□□ -1.18
PDLIM5-209ENST00000506632 RENP00797 406 aa7.68□□□□□ -1.18
PDLIM5-209ENST00000506632 IGHV2-5P01817 119 aa7.68□□□□□ -1.18
PDLIM5-209ENST00000506632 RAC2P15153 192 aa7.68□□□□□ -1.18
PDLIM5-209ENST00000506632 PCMT1P22061 227 aa7.68□□□□□ -1.18
PDLIM5-209ENST00000506632 CALB2P22676 271 aa7.68□□□□□ -1.18
PDLIM5-209ENST00000506632 ERFP50548 548 aa7.68□□□□□ -1.18
PDLIM5-209ENST00000506632 MS4A2Q01362 244 aa7.68□□□□□ -1.18
PDLIM5-209ENST00000506632 MVKQ03426 396 aa7.68□□□□□ -1.18
PDLIM5-209ENST00000506632 TRIM25Q14258 630 aaKnown RBP7.68□□□□□ -1.18
PDLIM5-209ENST00000506632 KRTAP24-1Q3LI83 254 aa7.68□□□□□ -1.18
PDLIM5-209ENST00000506632 ZNF362Q5T0B9 420 aaPredicted RBP7.68□□□□□ -1.18
PDLIM5-209ENST00000506632 AVPI1Q5T686 147 aa7.68□□□□□ -1.18
PDLIM5-209ENST00000506632 SLC18B1Q6NT16 456 aa7.68□□□□□ -1.18
PDLIM5-209ENST00000506632 RINLQ6ZS11 566 aa7.68□□□□□ -1.18
PDLIM5-209ENST00000506632 COLCA1Q6ZS62 124 aa7.68□□□□□ -1.18
PDLIM5-209ENST00000506632 JAZF1Q86VZ6 243 aa7.68□□□□□ -1.18
PDLIM5-209ENST00000506632 LINC00471Q8N535 108 aa7.68□□□□□ -1.18
PDLIM5-209ENST00000506632 SDR9C7Q8NEX9 313 aa7.68□□□□□ -1.18
PDLIM5-209ENST00000506632 GJC3Q8NFK1 279 aa7.68□□□□□ -1.18
PDLIM5-209ENST00000506632 OR9Q2Q8NGE9 314 aa7.68□□□□□ -1.18
PDLIM5-209ENST00000506632 OR8D4Q8NGM9 314 aa7.68□□□□□ -1.18
PDLIM5-209ENST00000506632 OR51F2Q8NH61 342 aa7.68□□□□□ -1.18
PDLIM5-209ENST00000506632 CCL17Q92583 94 aa7.68□□□□□ -1.18
PDLIM5-209ENST00000506632 PTP4A1Q93096 173 aa7.68□□□□□ -1.18
PDLIM5-209ENST00000506632 CMBLQ96DG6 245 aa7.68□□□□□ -1.18
PDLIM5-209ENST00000506632 PLA2G12AQ9BZM1 189 aa7.68□□□□□ -1.18
PDLIM5-209ENST00000506632 EGLN1Q9GZT9 426 aa7.68□□□□□ -1.18
PDLIM5-209ENST00000506632 EGLN3Q9H6Z9 239 aa7.68□□□□□ -1.18
PDLIM5-209ENST00000506632 PNRC2Q9NPJ4 139 aaKnown RBP7.68□□□□□ -1.18
PDLIM5-209ENST00000506632 RPRD1BQ9NQG5 326 aaKnown RBP7.68□□□□□ -1.18
PDLIM5-209ENST00000506632 G6PC2Q9NQR9 355 aa7.68□□□□□ -1.18
PDLIM5-209ENST00000506632 HIF1ANQ9NWT6 349 aa7.68□□□□□ -1.18
PDLIM5-209ENST00000506632 MRPL22Q9NWU5 206 aaKnown RBP7.68□□□□□ -1.18
PDLIM5-209ENST00000506632 VNN3Q9NY84 501 aa7.68□□□□□ -1.18
PDLIM5-209ENST00000506632 CYB5R1Q9UHQ9 305 aa7.68□□□□□ -1.18
PDLIM5-209ENST00000506632 POLR1DQ9Y2S0 133 aa7.68□□□□□ -1.18
PDLIM5-209ENST00000506632 FBN3Q75N90 2809 aa7.68□□□□□ -1.18
PDLIM5-209ENST00000506632 WNK2Q9Y3S1 2297 aa7.67□□□□□ -1.18
PDLIM5-209ENST00000506632 TRAV20A0A0B4J274 112 aa7.67□□□□□ -1.18
PDLIM5-209ENST00000506632 A0A1B0GWJ7 208 aa7.67□□□□□ -1.18
PDLIM5-209ENST00000506632 TNFRSF11BO00300 401 aa7.67□□□□□ -1.18
PDLIM5-209ENST00000506632 TPD52L2O43399 206 aaKnown RBP7.67□□□□□ -1.18
PDLIM5-209ENST00000506632 GASTP01350 101 aa7.67□□□□□ -1.18
PDLIM5-209ENST00000506632 NOS3P29474 1203 aa7.67□□□□□ -1.18
PDLIM5-209ENST00000506632 GGT2P36268 569 aa7.67□□□□□ -1.18
PDLIM5-209ENST00000506632 TNFAIP6P98066 277 aaPredicted RBP7.67□□□□□ -1.18
PDLIM5-209ENST00000506632 KHDRBS1Q07666 443 aaKnown RBP eCLIP7.67□□□□□ -1.18
PDLIM5-209ENST00000506632 SLC3A1Q07837 685 aa7.67□□□□□ -1.18
PDLIM5-209ENST00000506632 SLC36A3Q495N2 470 aa7.67□□□□□ -1.18
PDLIM5-209ENST00000506632 SLC35F1Q5T1Q4 408 aa7.67□□□□□ -1.18
PDLIM5-209ENST00000506632 RPL13AP3Q6NVV1 102 aa7.67□□□□□ -1.18
PDLIM5-209ENST00000506632 CORO6Q6QEF8 472 aa7.67□□□□□ -1.18
PDLIM5-209ENST00000506632 CFAP77Q6ZQR2 320 aa7.67□□□□□ -1.18
PDLIM5-209ENST00000506632 C1orf229Q6ZS94 237 aaPredicted RBP7.67□□□□□ -1.18
PDLIM5-209ENST00000506632 RASSF6Q6ZTQ3 369 aa7.67□□□□□ -1.18
PDLIM5-209ENST00000506632 DHFR2Q86XF0 187 aa7.67□□□□□ -1.18
PDLIM5-209ENST00000506632 CCDC197Q8NCU1 140 aa7.67□□□□□ -1.18
PDLIM5-209ENST00000506632 OR52E2Q8NGJ4 325 aa7.67□□□□□ -1.18
PDLIM5-209ENST00000506632 RAB1CQ92928 201 aa7.67□□□□□ -1.18
PDLIM5-209ENST00000506632 POP5Q969H6 163 aaKnown RBP7.67□□□□□ -1.18
PDLIM5-209ENST00000506632 APOBEC3DQ96AK3 386 aaPredicted RBP7.67□□□□□ -1.18
PDLIM5-209ENST00000506632 RAB39BQ96DA2 213 aa7.67□□□□□ -1.18
PDLIM5-209ENST00000506632 TIMD4Q96H15 378 aa7.67□□□□□ -1.18
PDLIM5-209ENST00000506632 C1QTNF5Q9BXJ0 243 aa7.67□□□□□ -1.18
PDLIM5-209ENST00000506632 DGCR6LQ9BY27 220 aa7.67□□□□□ -1.18
PDLIM5-209ENST00000506632 C1orf21Q9H246 121 aa7.67□□□□□ -1.18
PDLIM5-209ENST00000506632 FN3KQ9H479 309 aa7.67□□□□□ -1.18
PDLIM5-209ENST00000506632 LPAR2Q9HBW0 351 aa7.67□□□□□ -1.18
PDLIM5-209ENST00000506632 DCAF16Q9NXF7 216 aa7.67□□□□□ -1.18
PDLIM5-209ENST00000506632 TAS2R1Q9NYW7 299 aa7.67□□□□□ -1.18
PDLIM5-209ENST00000506632 IL19Q9UHD0 177 aa7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms