RNA–Protein interactions for RNA: ENST00000506244.5

SNCA-209, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNCA, Length 570 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-209ENST00000506244 MAD2L1BPQ15013 274 aaPredicted RBP14.3□□□□□ -0.12
SNCA-209ENST00000506244 PCGF3Q3KNV8 242 aa14.3□□□□□ -0.12
SNCA-209ENST00000506244 SPATA46Q5T0L3 261 aa14.3□□□□□ -0.12
SNCA-209ENST00000506244 KDM4DQ6B0I6 523 aa14.3□□□□□ -0.12
SNCA-209ENST00000506244 ACSM5Q6NUN0 579 aa14.3□□□□□ -0.12
SNCA-209ENST00000506244 TMEM154Q6P9G4 183 aa14.3□□□□□ -0.12
SNCA-209ENST00000506244 CFAP77Q6ZQR2 320 aa14.3□□□□□ -0.12
SNCA-209ENST00000506244 KLF14Q8TD94 323 aaPredicted RBP14.3□□□□□ -0.12
SNCA-209ENST00000506244 SPTSSAQ969W0 71 aa14.3□□□□□ -0.12
SNCA-209ENST00000506244 APOBEC3DQ96AK3 386 aaPredicted RBP14.3□□□□□ -0.12
SNCA-209ENST00000506244 INTS14Q96SY0 518 aa14.3□□□□□ -0.12
SNCA-209ENST00000506244 RBM4BQ9BQ04 359 aaKnown RBP14.3□□□□□ -0.12
SNCA-209ENST00000506244 OR2J1Q9GZK6 312 aa14.3□□□□□ -0.12
SNCA-209ENST00000506244 SEMA6AQ9H2E6 1030 aa14.3□□□□□ -0.12
SNCA-209ENST00000506244 TPK1Q9H3S4 243 aa14.3□□□□□ -0.12
SNCA-209ENST00000506244 HINT3Q9NQE9 182 aaKnown RBP14.3□□□□□ -0.12
SNCA-209ENST00000506244 LOC390937A0A1W2PQ73 354 aa14.29□□□□□ -0.12
SNCA-209ENST00000506244 FAM183AA6NL82 134 aa14.29□□□□□ -0.12
SNCA-209ENST00000506244 CLPTM1O96005 669 aa14.29□□□□□ -0.12
SNCA-209ENST00000506244 CLUP10909 449 aa14.29□□□□□ -0.12
SNCA-209ENST00000506244 GSTT1P30711 240 aa14.29□□□□□ -0.12
SNCA-209ENST00000506244 DBPQ10586 325 aaPredicted RBP14.29□□□□□ -0.12
SNCA-209ENST00000506244 SNAPC1Q16533 368 aa14.29□□□□□ -0.12
SNCA-209ENST00000506244 PCK2Q16822 640 aa14.29□□□□□ -0.12
SNCA-209ENST00000506244 TEX30Q5JUR7 227 aa14.29□□□□□ -0.12
SNCA-209ENST00000506244 SLC35D3Q5M8T2 416 aa14.29□□□□□ -0.12
SNCA-209ENST00000506244 PLBD1Q6P4A8 553 aa14.29□□□□□ -0.12
SNCA-209ENST00000506244 ZNF540Q8NDQ6 660 aa14.29□□□□□ -0.12
SNCA-209ENST00000506244 SLC7A6Q92536 515 aa14.29□□□□□ -0.12
SNCA-209ENST00000506244 REG4Q9BYZ8 158 aa14.29□□□□□ -0.12
SNCA-209ENST00000506244 OR51V1Q9H2C8 321 aa14.29□□□□□ -0.12
SNCA-209ENST00000506244 MED20Q9H944 212 aa14.29□□□□□ -0.12
SNCA-209ENST00000506244 DDX28Q9NUL7 540 aaKnown RBP14.29□□□□□ -0.12
SNCA-209ENST00000506244 ORC6Q9Y5N6 252 aa14.29□□□□□ -0.12
SNCA-209ENST00000506244 IGHV4-30-2A0A087WSY4 118 aa14.28□□□□□ -0.12
SNCA-209ENST00000506244 SAC3D1A6NKF1 404 aa14.28□□□□□ -0.12
SNCA-209ENST00000506244 C17orf100A8MU93 164 aa14.28□□□□□ -0.12
SNCA-209ENST00000506244 RNF223E7ERA6 249 aa14.28□□□□□ -0.12
SNCA-209ENST00000506244 SMAD7O15105 426 aaKnown RBP14.28□□□□□ -0.12
SNCA-209ENST00000506244 NGFP01138 241 aa14.28□□□□□ -0.12
SNCA-209ENST00000506244 DBHP09172 617 aa14.28□□□□□ -0.12
SNCA-209ENST00000506244 DAOP14920 347 aa14.28□□□□□ -0.12
SNCA-209ENST00000506244 ACANP16112 2415 aa14.28□□□□□ -0.12
SNCA-209ENST00000506244 MPV17P39210 176 aa14.28□□□□□ -0.12
SNCA-209ENST00000506244 TPTEP56180 551 aa14.28□□□□□ -0.12
SNCA-209ENST00000506244 RPS7P62081 194 aaKnown RBP14.28□□□□□ -0.12
SNCA-209ENST00000506244 PTGES3Q15185 160 aaKnown RBP14.28□□□□□ -0.12
SNCA-209ENST00000506244 CARTPTQ16568 116 aa14.28□□□□□ -0.12
SNCA-209ENST00000506244 FAM209AQ5JX71 171 aa14.28□□□□□ -0.12
SNCA-209ENST00000506244 LINC01590Q5TEZ4 76 aa14.28□□□□□ -0.12
SNCA-209ENST00000506244 LCN1P1Q5VSP4 162 aa14.28□□□□□ -0.12
SNCA-209ENST00000506244 LYPD4Q6UWN0 246 aa14.28□□□□□ -0.12
SNCA-209ENST00000506244 CXXC5Q7LFL8 322 aaKnown RBP14.28□□□□□ -0.12
SNCA-209ENST00000506244 SHFQ7M4L6 423 aa14.28□□□□□ -0.12
SNCA-209ENST00000506244 DCXRQ7Z4W1 244 aa14.28□□□□□ -0.12
SNCA-209ENST00000506244 ERI1Q8IV48 349 aaKnown RBP14.28□□□□□ -0.12
SNCA-209ENST00000506244 ZNF511Q8NB15 262 aa14.28□□□□□ -0.12
SNCA-209ENST00000506244 OR6N2Q8NGY6 317 aa14.28□□□□□ -0.12
SNCA-209ENST00000506244 C10orf105Q8TEF2 133 aa14.28□□□□□ -0.12
SNCA-209ENST00000506244 ZNRF4Q8WWF5 429 aa14.28□□□□□ -0.12
SNCA-209ENST00000506244 MAP6Q96JE9 813 aa14.28□□□□□ -0.12
SNCA-209ENST00000506244 COPS4Q9BT78 406 aa14.28□□□□□ -0.12
SNCA-209ENST00000506244 HCAR1Q9BXC0 346 aa14.28□□□□□ -0.12
SNCA-209ENST00000506244 WDR76Q9H967 626 aa14.28□□□□□ -0.12
SNCA-209ENST00000506244 PNRC2Q9NPJ4 139 aaKnown RBP14.28□□□□□ -0.12
SNCA-209ENST00000506244 NKIRAS2Q9NYR9 191 aa14.28□□□□□ -0.12
SNCA-209ENST00000506244 TVP23BQ9NYZ1 205 aa14.28□□□□□ -0.12
SNCA-209ENST00000506244 TEP1Q99973 2627 aaKnown RBP14.28□□□□□ -0.12
SNCA-209ENST00000506244 ZNF878C9JN71 531 aa14.27□□□□□ -0.13
SNCA-209ENST00000506244 F5H5K5 113 aa14.27□□□□□ -0.13
SNCA-209ENST00000506244 H3BNX3 289 aa14.27□□□□□ -0.13
SNCA-209ENST00000506244 M0R135 149 aa14.27□□□□□ -0.13
SNCA-209ENST00000506244 ZNF593O00488 134 aaPredicted RBP14.27□□□□□ -0.13
SNCA-209ENST00000506244 TIMM8AO60220 97 aaPredicted RBP14.27□□□□□ -0.13
SNCA-209ENST00000506244 LY6HO94772 140 aa14.27□□□□□ -0.13
SNCA-209ENST00000506244 NAT2P11245 290 aa14.27□□□□□ -0.13
SNCA-209ENST00000506244 SLC15A1P46059 708 aa14.27□□□□□ -0.13
SNCA-209ENST00000506244 PPP2R2BQ00005 443 aa14.27□□□□□ -0.13
SNCA-209ENST00000506244 TAF13Q15543 124 aa14.27□□□□□ -0.13
SNCA-209ENST00000506244 ALKBH6Q3KRA9 238 aa14.27□□□□□ -0.13
SNCA-209ENST00000506244 KRTAP27-1Q3LI81 207 aa14.27□□□□□ -0.13
SNCA-209ENST00000506244 KLHL12Q53G59 568 aa14.27□□□□□ -0.13
SNCA-209ENST00000506244 TMEM236Q5W0B7 351 aa14.27□□□□□ -0.13
SNCA-209ENST00000506244 CPOQ8IVL8 374 aa14.27□□□□□ -0.13
SNCA-209ENST00000506244 ZCCHC24Q8N2G6 241 aaKnown RBP14.27□□□□□ -0.13
SNCA-209ENST00000506244 CIARTQ8N365 385 aaPredicted RBP14.27□□□□□ -0.13
SNCA-209ENST00000506244 UBASH3BQ8TF42 649 aa14.27□□□□□ -0.13
SNCA-209ENST00000506244 STMN2Q93045 179 aa14.27□□□□□ -0.13
SNCA-209ENST00000506244 ZNF799Q96GE5 643 aa14.27□□□□□ -0.13
SNCA-209ENST00000506244 DIRC2Q96SL1 478 aa14.27□□□□□ -0.13
SNCA-209ENST00000506244 CIB1Q99828 191 aa14.27□□□□□ -0.13
SNCA-209ENST00000506244 PKP2Q99959 881 aa14.27□□□□□ -0.13
SNCA-209ENST00000506244 MARCH7Q9H992 704 aa14.27□□□□□ -0.13
SNCA-209ENST00000506244 RTTNQ86VV8 2226 aa14.27□□□□□ -0.13
SNCA-209ENST00000506244 ZAR1LA6NP61 321 aa14.26□□□□□ -0.13
SNCA-209ENST00000506244 MITFO75030 526 aaPredicted RBP14.26□□□□□ -0.13
SNCA-209ENST00000506244 ACSM4P0C7M7 580 aa14.26□□□□□ -0.13
SNCA-209ENST00000506244 RAC2P15153 192 aa14.26□□□□□ -0.13
SNCA-209ENST00000506244 RPS27P42677 84 aaKnown RBP14.26□□□□□ -0.13
SNCA-209ENST00000506244 SLC6A9P48067 706 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms