RNA–Protein interactions for RNA: ENST00000505659.1

HMGB1P29-201, Transcript of high mobility group box 1 pseudogene 29, humanhuman

BASIC

Gene HMGB1P29, Length 499 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P29-201ENST00000505659 H7C417 338 aa1.21□□□□□ -2.22
HMGB1P29-201ENST00000505659 KLHL2O95198 593 aa1.21□□□□□ -2.22
HMGB1P29-201ENST00000505659 LHBP01229 141 aa1.21□□□□□ -2.22
HMGB1P29-201ENST00000505659 GGT1P19440 569 aa1.21□□□□□ -2.22
HMGB1P29-201ENST00000505659 SSR1P43307 286 aaKnown RBP1.21□□□□□ -2.22
HMGB1P29-201ENST00000505659 CSNK1EP49674 416 aaKnown RBP1.21□□□□□ -2.22
HMGB1P29-201ENST00000505659 CCNHP51946 323 aaPredicted RBP1.21□□□□□ -2.22
HMGB1P29-201ENST00000505659 RPL23P62829 140 aaKnown RBP1.21□□□□□ -2.22
HMGB1P29-201ENST00000505659 RBMY1FQ15415 496 aaKnown RBP1.21□□□□□ -2.22
HMGB1P29-201ENST00000505659 TGIF2LXQ8IUE1 241 aa1.21□□□□□ -2.22
HMGB1P29-201ENST00000505659 OR8J1Q8NGP2 316 aa1.21□□□□□ -2.22
HMGB1P29-201ENST00000505659 ETNK2Q9NVF9 386 aa1.21□□□□□ -2.22
HMGB1P29-201ENST00000505659 MTFP1Q9UDX5 166 aa1.21□□□□□ -2.22
HMGB1P29-201ENST00000505659 DDX49Q9Y6V7 483 aaKnown RBP1.21□□□□□ -2.22
HMGB1P29-201ENST00000505659 PALLDQ8WX93 1383 aa1.21□□□□□ -2.22
HMGB1P29-201ENST00000505659 IGHV1-3A0A0C4DH29 117 aa1.2□□□□□ -2.22
HMGB1P29-201ENST00000505659 PCP4L1A6NKN8 68 aa1.2□□□□□ -2.22
HMGB1P29-201ENST00000505659 GLSO94925 669 aaPredicted RBP1.2□□□□□ -2.22
HMGB1P29-201ENST00000505659 IGHV3-11P01762 117 aa1.2□□□□□ -2.22
HMGB1P29-201ENST00000505659 SERPINA5P05154 406 aa1.2□□□□□ -2.22
HMGB1P29-201ENST00000505659 HRES1P13985 223 aa1.2□□□□□ -2.22
HMGB1P29-201ENST00000505659 IFNAR2P48551 515 aa1.2□□□□□ -2.22
HMGB1P29-201ENST00000505659 SYNJ2BPP57105 145 aa1.2□□□□□ -2.22
HMGB1P29-201ENST00000505659 PLP1P60201 277 aa1.2□□□□□ -2.22
HMGB1P29-201ENST00000505659 PRR3P79522 188 aaKnown RBP1.2□□□□□ -2.22
HMGB1P29-201ENST00000505659 TGM3Q08188 693 aa1.2□□□□□ -2.22
HMGB1P29-201ENST00000505659 DMC1Q14565 340 aa1.2□□□□□ -2.22
HMGB1P29-201ENST00000505659 IHHQ14623 411 aa1.2□□□□□ -2.22
HMGB1P29-201ENST00000505659 OR7A5Q15622 319 aa1.2□□□□□ -2.22
HMGB1P29-201ENST00000505659 CCDC92Q53HC0 331 aaPredicted RBP1.2□□□□□ -2.22
HMGB1P29-201ENST00000505659 GPR107Q5VW38 600 aa1.2□□□□□ -2.22
HMGB1P29-201ENST00000505659 SMARCD3Q6STE5 483 aa1.2□□□□□ -2.22
HMGB1P29-201ENST00000505659 EGFL6Q8IUX8 553 aa1.2□□□□□ -2.22
HMGB1P29-201ENST00000505659 C11orf72Q8NBR9 251 aa1.2□□□□□ -2.22
HMGB1P29-201ENST00000505659 OR2A1Q8NGT9 310 aa1.2□□□□□ -2.22
HMGB1P29-201ENST00000505659 CPNE4Q96A23 557 aaPredicted RBP1.2□□□□□ -2.22
HMGB1P29-201ENST00000505659 MICU1Q9BPX6 476 aa1.2□□□□□ -2.22
HMGB1P29-201ENST00000505659 SAMD10Q9BYL1 202 aa1.2□□□□□ -2.22
HMGB1P29-201ENST00000505659 TMEM9BQ9NQ34 198 aa1.2□□□□□ -2.22
HMGB1P29-201ENST00000505659 IKZF2Q9UKS7 526 aa1.2□□□□□ -2.22
HMGB1P29-201ENST00000505659 SAMHD1Q9Y3Z3 626 aaKnown RBP1.2□□□□□ -2.22
HMGB1P29-201ENST00000505659 LRRIQ3A6PVS8 624 aaPredicted RBP1.19□□□□□ -2.22
HMGB1P29-201ENST00000505659 TSPAN13O95857 204 aa1.19□□□□□ -2.22
HMGB1P29-201ENST00000505659 PABPC4LP0CB38 370 aaKnown RBP1.19□□□□□ -2.22
HMGB1P29-201ENST00000505659 ERGP11308 486 aa1.19□□□□□ -2.22
HMGB1P29-201ENST00000505659 ZNF43P17038 809 aa1.19□□□□□ -2.22
HMGB1P29-201ENST00000505659 NTF3P20783 257 aa1.19□□□□□ -2.22
HMGB1P29-201ENST00000505659 GLRA2P23416 452 aa1.19□□□□□ -2.22
HMGB1P29-201ENST00000505659 PSMB5P28074 263 aa1.19□□□□□ -2.22
HMGB1P29-201ENST00000505659 VSX2P58304 361 aaPredicted RBP1.19□□□□□ -2.22
HMGB1P29-201ENST00000505659 TNFRSF9Q07011 255 aa1.19□□□□□ -2.22
HMGB1P29-201ENST00000505659 CYP24A1Q07973 514 aa1.19□□□□□ -2.22
HMGB1P29-201ENST00000505659 QPRTQ15274 297 aa1.19□□□□□ -2.22
HMGB1P29-201ENST00000505659 DEFB134Q4QY38 66 aa1.19□□□□□ -2.22
HMGB1P29-201ENST00000505659 SOHLH1Q5JUK2 328 aa1.19□□□□□ -2.22
HMGB1P29-201ENST00000505659 SGPP2Q8IWX5 399 aa1.19□□□□□ -2.22
HMGB1P29-201ENST00000505659 NPWQ8N729 165 aa1.19□□□□□ -2.22
HMGB1P29-201ENST00000505659 FBXL13Q8NEE6 735 aa1.19□□□□□ -2.22
HMGB1P29-201ENST00000505659 B3GNT7Q8NFL0 401 aa1.19□□□□□ -2.22
HMGB1P29-201ENST00000505659 KLF6Q99612 283 aaPredicted RBP1.19□□□□□ -2.22
HMGB1P29-201ENST00000505659 ATP5SQ99766 215 aa1.19□□□□□ -2.22
HMGB1P29-201ENST00000505659 LINC00574Q9H8X3 128 aa1.19□□□□□ -2.22
HMGB1P29-201ENST00000505659 NEK6Q9HC98 313 aa1.19□□□□□ -2.22
HMGB1P29-201ENST00000505659 SMIM26A0A096LP01 95 aa1.18□□□□□ -2.22
HMGB1P29-201ENST00000505659 CLRN2A0PK11 232 aa1.18□□□□□ -2.22
HMGB1P29-201ENST00000505659 MANBAO00462 879 aa1.18□□□□□ -2.22
HMGB1P29-201ENST00000505659 SPAG6O75602 509 aa1.18□□□□□ -2.22
HMGB1P29-201ENST00000505659 SEMA3DO95025 777 aa1.18□□□□□ -2.22
HMGB1P29-201ENST00000505659 ACSM4P0C7M7 580 aa1.18□□□□□ -2.22
HMGB1P29-201ENST00000505659 ZNF35P13682 527 aa1.18□□□□□ -2.22
HMGB1P29-201ENST00000505659 CHMLP26374 656 aa1.18□□□□□ -2.22
HMGB1P29-201ENST00000505659 NSG1P42857 185 aa1.18□□□□□ -2.22
HMGB1P29-201ENST00000505659 IDH2P48735 452 aaKnown RBP1.18□□□□□ -2.22
HMGB1P29-201ENST00000505659 CEBPDP49716 269 aaPredicted RBP1.18□□□□□ -2.22
HMGB1P29-201ENST00000505659 CMC4P56277 68 aaPredicted RBP1.18□□□□□ -2.22
HMGB1P29-201ENST00000505659 IL24Q13007 206 aa1.18□□□□□ -2.22
HMGB1P29-201ENST00000505659 MAD2L1BPQ15013 274 aaPredicted RBP1.18□□□□□ -2.22
HMGB1P29-201ENST00000505659 PGGHGQ32M88 737 aa1.18□□□□□ -2.22
HMGB1P29-201ENST00000505659 YIF1BQ5BJH7 314 aa1.18□□□□□ -2.22
HMGB1P29-201ENST00000505659 CTSL3PQ5NE16 218 aa1.18□□□□□ -2.22
HMGB1P29-201ENST00000505659 MED27Q6P2C8 311 aa1.18□□□□□ -2.22
HMGB1P29-201ENST00000505659 TBPL2Q6SJ96 375 aa1.18□□□□□ -2.22
HMGB1P29-201ENST00000505659 STK40Q8N2I9 435 aa1.18□□□□□ -2.22
HMGB1P29-201ENST00000505659 PRELID2Q8N945 189 aa1.18□□□□□ -2.22
HMGB1P29-201ENST00000505659 GPR26Q8NDV2 337 aa1.18□□□□□ -2.22
HMGB1P29-201ENST00000505659 BHLHE23Q8NDY6 225 aa1.18□□□□□ -2.22
HMGB1P29-201ENST00000505659 OR11H7Q8NGC8 314 aa1.18□□□□□ -2.22
HMGB1P29-201ENST00000505659 DCPSQ96C86 337 aaKnown RBP1.18□□□□□ -2.22
HMGB1P29-201ENST00000505659 TBC1D31Q96DN5 1066 aa1.18□□□□□ -2.22
HMGB1P29-201ENST00000505659 MARVELD1Q9BSK0 173 aa1.18□□□□□ -2.22
HMGB1P29-201ENST00000505659 PLXNB1O43157 2135 aa1.18□□□□□ -2.22
HMGB1P29-201ENST00000505659 SORL1Q92673 2214 aa1.17□□□□□ -2.22
HMGB1P29-201ENST00000505659 ARHGEF35A5YM69 484 aa1.17□□□□□ -2.22
HMGB1P29-201ENST00000505659 MFNGO00587 321 aa1.17□□□□□ -2.22
HMGB1P29-201ENST00000505659 PLPP1O14494 284 aa1.17□□□□□ -2.22
HMGB1P29-201ENST00000505659 EIF1BO60739 113 aaKnown RBP1.17□□□□□ -2.22
HMGB1P29-201ENST00000505659 SURF6O75683 361 aaKnown RBP1.17□□□□□ -2.22
HMGB1P29-201ENST00000505659 PAHP00439 452 aa1.17□□□□□ -2.22
HMGB1P29-201ENST00000505659 CD28P10747 220 aa1.17□□□□□ -2.22
HMGB1P29-201ENST00000505659 DESP17661 470 aa1.17□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms