RNA–Protein interactions for RNA: ENST00000504430.5

NIPBL-204, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 2

Gene NIPBL, Length 3,455 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-204ENST00000504430 GM2AP17900 193 aa4.38□□□□□ -1.71
NIPBL-204ENST00000504430 EDNRAP25101 427 aa4.38□□□□□ -1.71
NIPBL-204ENST00000504430 SAA4P35542 130 aa4.38□□□□□ -1.71
NIPBL-204ENST00000504430 BIDP55957 195 aa4.38□□□□□ -1.71
NIPBL-204ENST00000504430 VSX2P58304 361 aaPredicted RBP4.38□□□□□ -1.71
NIPBL-204ENST00000504430 DYNLL1P63167 89 aaKnown RBP4.38□□□□□ -1.71
NIPBL-204ENST00000504430 KIR2DS5Q14953 304 aa4.38□□□□□ -1.71
NIPBL-204ENST00000504430 DDI2Q5TDH0 399 aa4.38□□□□□ -1.71
NIPBL-204ENST00000504430 TMEM207Q6UWW9 146 aa4.38□□□□□ -1.71
NIPBL-204ENST00000504430 FRRS1Q6ZNA5 592 aa4.38□□□□□ -1.71
NIPBL-204ENST00000504430 ZNF561Q8N587 486 aa4.38□□□□□ -1.71
NIPBL-204ENST00000504430 OR2T11Q8NH01 316 aa4.38□□□□□ -1.71
NIPBL-204ENST00000504430 TFB1MQ8WVM0 346 aaKnown RBP4.38□□□□□ -1.71
NIPBL-204ENST00000504430 FGF11Q92914 225 aa4.38□□□□□ -1.71
NIPBL-204ENST00000504430 OR52B2Q96RD2 323 aa4.38□□□□□ -1.71
NIPBL-204ENST00000504430 TSC22D3Q99576 134 aa4.38□□□□□ -1.71
NIPBL-204ENST00000504430 WFDC1Q9HC57 220 aa4.38□□□□□ -1.71
NIPBL-204ENST00000504430 KRCC1Q9NPI7 259 aaPredicted RBP4.38□□□□□ -1.71
NIPBL-204ENST00000504430 IL36AQ9UHA7 158 aa4.38□□□□□ -1.71
NIPBL-204ENST00000504430 FAM32AQ9Y421 112 aaKnown RBP4.38□□□□□ -1.71
NIPBL-204ENST00000504430 LOC101059948A0A1B0GTJ6 334 aa4.38□□□□□ -1.71
NIPBL-204ENST00000504430 OR6C6A6NF89 314 aa4.38□□□□□ -1.71
NIPBL-204ENST00000504430 PRR32B1ATL7 298 aa4.38□□□□□ -1.71
NIPBL-204ENST00000504430 F8W036 122 aa4.38□□□□□ -1.71
NIPBL-204ENST00000504430 ISG15P05161 165 aa4.38□□□□□ -1.71
NIPBL-204ENST00000504430 RPL35AP18077 110 aaKnown RBP4.38□□□□□ -1.71
NIPBL-204ENST00000504430 CCKARP32238 428 aa4.38□□□□□ -1.71
NIPBL-204ENST00000504430 TNFSF9P41273 254 aa4.38□□□□□ -1.71
NIPBL-204ENST00000504430 ZNF85Q03923 595 aa4.38□□□□□ -1.71
NIPBL-204ENST00000504430 Q6ZVQ6 151 aa4.38□□□□□ -1.71
NIPBL-204ENST00000504430 PIM3Q86V86 326 aa4.38□□□□□ -1.71
NIPBL-204ENST00000504430 VKORC1L1Q8N0U8 176 aa4.38□□□□□ -1.71
NIPBL-204ENST00000504430 OR4C13Q8NGP0 309 aa4.38□□□□□ -1.71
NIPBL-204ENST00000504430 SLC25A38Q96DW6 304 aa4.38□□□□□ -1.71
NIPBL-204ENST00000504430 FAM218AQ96MZ4 157 aa4.38□□□□□ -1.71
NIPBL-204ENST00000504430 REEP4Q9H6H4 257 aa4.38□□□□□ -1.71
NIPBL-204ENST00000504430 NIPAL2Q9H841 368 aa4.38□□□□□ -1.71
NIPBL-204ENST00000504430 UBE2TQ9NPD8 197 aaPredicted RBP4.38□□□□□ -1.71
NIPBL-204ENST00000504430 RAB26Q9ULW5 256 aa4.38□□□□□ -1.71
NIPBL-204ENST00000504430 CPQQ9Y646 472 aa4.38□□□□□ -1.71
NIPBL-204ENST00000504430 NRCAMQ92823 1304 aa4.38□□□□□ -1.71
NIPBL-204ENST00000504430 A0A1B0GTH9 108 aa4.38□□□□□ -1.71
NIPBL-204ENST00000504430 HLA-AP01891 365 aaKnown RBP4.38□□□□□ -1.71
NIPBL-204ENST00000504430 FAM228BP0C875 321 aa4.38□□□□□ -1.71
NIPBL-204ENST00000504430 IGHV4-31P0DP07 118 aa4.38□□□□□ -1.71
NIPBL-204ENST00000504430 TAC1P20366 129 aa4.38□□□□□ -1.71
NIPBL-204ENST00000504430 MPGP29372 298 aa4.38□□□□□ -1.71
NIPBL-204ENST00000504430 ARR3P36575 388 aa4.38□□□□□ -1.71
NIPBL-204ENST00000504430 GPX4P36969 197 aaPredicted RBP4.38□□□□□ -1.71
NIPBL-204ENST00000504430 SP4Q02446 784 aa4.38□□□□□ -1.71
NIPBL-204ENST00000504430 OR5I1Q13606 314 aa4.38□□□□□ -1.71
NIPBL-204ENST00000504430 ZNF234Q14588 700 aa4.38□□□□□ -1.71
NIPBL-204ENST00000504430 OXA1LQ15070 435 aa4.38□□□□□ -1.71
NIPBL-204ENST00000504430 TCEAL6Q6IPX3 200 aa4.38□□□□□ -1.71
NIPBL-204ENST00000504430 C16orf78Q8WTQ4 265 aa4.38□□□□□ -1.71
NIPBL-204ENST00000504430 EXOSC8Q96B26 276 aaKnown RBP4.38□□□□□ -1.71
NIPBL-204ENST00000504430 OR8B4Q96RC9 309 aa4.38□□□□□ -1.71
NIPBL-204ENST00000504430 RARRES2Q99969 163 aa4.38□□□□□ -1.71
NIPBL-204ENST00000504430 NAT10Q9H0A0 1025 aaKnown RBP4.38□□□□□ -1.71
NIPBL-204ENST00000504430 MS4A6AQ9H2W1 248 aa4.38□□□□□ -1.71
NIPBL-204ENST00000504430 RNF41Q9H4P4 317 aaPredicted RBP4.38□□□□□ -1.71
NIPBL-204ENST00000504430 PLEKHA3Q9HB20 300 aa4.38□□□□□ -1.71
NIPBL-204ENST00000504430 ZBTB20Q9HC78 741 aaPredicted RBP4.38□□□□□ -1.71
NIPBL-204ENST00000504430 ZNF334Q9HCZ1 680 aaPredicted RBP4.38□□□□□ -1.71
NIPBL-204ENST00000504430 CTPS2Q9NRF8 586 aa4.38□□□□□ -1.71
NIPBL-204ENST00000504430 DDIT4Q9NX09 232 aa4.38□□□□□ -1.71
NIPBL-204ENST00000504430 AMDHD2Q9Y303 409 aa4.38□□□□□ -1.71
NIPBL-204ENST00000504430 WIPI2Q9Y4P8 454 aa4.38□□□□□ -1.71
NIPBL-204ENST00000504430 ZNF878C9JN71 531 aa4.37□□□□□ -1.71
NIPBL-204ENST00000504430 EI24O14681 340 aa4.37□□□□□ -1.71
NIPBL-204ENST00000504430 FOXH1O75593 365 aa4.37□□□□□ -1.71
NIPBL-204ENST00000504430 SNHG28P0DPA3 235 aa4.37□□□□□ -1.71
NIPBL-204ENST00000504430 GFAPP14136 432 aa4.37□□□□□ -1.71
NIPBL-204ENST00000504430 CXCR1P25024 350 aa4.37□□□□□ -1.71
NIPBL-204ENST00000504430 IFNGR2P38484 337 aa4.37□□□□□ -1.71
NIPBL-204ENST00000504430 EMDP50402 254 aa4.37□□□□□ -1.71
NIPBL-204ENST00000504430 STC1P52823 247 aa4.37□□□□□ -1.71
NIPBL-204ENST00000504430 LINC00310P59036 64 aa4.37□□□□□ -1.71
NIPBL-204ENST00000504430 CYP51A1Q16850 503 aa4.37□□□□□ -1.71
NIPBL-204ENST00000504430 TRIM40Q6P9F5 258 aa4.37□□□□□ -1.71
NIPBL-204ENST00000504430 C4orf22Q6V702 233 aa4.37□□□□□ -1.71
NIPBL-204ENST00000504430 Q6YL49 198 aa4.37□□□□□ -1.71
NIPBL-204ENST00000504430 ZNF66Q6ZN08 573 aa4.37□□□□□ -1.71
NIPBL-204ENST00000504430 TMEM179Q6ZVK1 233 aa4.37□□□□□ -1.71
NIPBL-204ENST00000504430 MBOAT2Q6ZWT7 520 aa4.37□□□□□ -1.71
NIPBL-204ENST00000504430 PRSS41Q7RTY9 318 aa4.37□□□□□ -1.71
NIPBL-204ENST00000504430 TMED4Q7Z7H5 227 aa4.37□□□□□ -1.71
NIPBL-204ENST00000504430 ZNF554Q86TJ5 538 aa4.37□□□□□ -1.71
NIPBL-204ENST00000504430 LGI3Q8N145 548 aa4.37□□□□□ -1.71
NIPBL-204ENST00000504430 CLDN22Q8N7P3 220 aa4.37□□□□□ -1.71
NIPBL-204ENST00000504430 OR52B6Q8NGF0 335 aa4.37□□□□□ -1.71
NIPBL-204ENST00000504430 OR6T1Q8NGN1 323 aa4.37□□□□□ -1.71
NIPBL-204ENST00000504430 OR2T6Q8NHC8 308 aa4.37□□□□□ -1.71
NIPBL-204ENST00000504430 MOCOSQ96EN8 888 aa4.37□□□□□ -1.71
NIPBL-204ENST00000504430 MRPL45Q9BRJ2 306 aaKnown RBP4.37□□□□□ -1.71
NIPBL-204ENST00000504430 DKKL1Q9UK85 242 aa4.37□□□□□ -1.71
NIPBL-204ENST00000504430 RLFQ13129 1914 aa4.37□□□□□ -1.71
NIPBL-204ENST00000504430 STK36Q9NRP7 1315 aa4.37□□□□□ -1.71
NIPBL-204ENST00000504430 ZNF724A8MTY0 619 aa4.37□□□□□ -1.71
NIPBL-204ENST00000504430 IDSB3KWA1 339 aa4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 199.2 ms