RNA–Protein interactions for RNA: ENST00000504181.1

LSM6-204, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM6, Length 549 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-204ENST00000504181 TIMM10BQ9Y5J6 103 aa10.13□□□□□ -0.79
LSM6-204ENST00000504181 TSSC4Q9Y5U2 329 aaPredicted RBP10.13□□□□□ -0.79
LSM6-204ENST00000504181 TRBV23-1A0A0A0MS06 115 aa10.12□□□□□ -0.79
LSM6-204ENST00000504181 MCIDASD6RGH6 385 aa10.12□□□□□ -0.79
LSM6-204ENST00000504181 SYNGR1O43759 233 aa10.12□□□□□ -0.79
LSM6-204ENST00000504181 TRMUO75648 421 aaKnown RBP10.12□□□□□ -0.79
LSM6-204ENST00000504181 MT-ATP6P00846 226 aa10.12□□□□□ -0.79
LSM6-204ENST00000504181 LHBP01229 141 aa10.12□□□□□ -0.79
LSM6-204ENST00000504181 RAC2P15153 192 aa10.12□□□□□ -0.79
LSM6-204ENST00000504181 CHATP28329 748 aa10.12□□□□□ -0.79
LSM6-204ENST00000504181 VDAC2P45880 294 aaPredicted RBP10.12□□□□□ -0.79
LSM6-204ENST00000504181 RGS6P49758 472 aa10.12□□□□□ -0.79
LSM6-204ENST00000504181 UBE2E1P51965 193 aa10.12□□□□□ -0.79
LSM6-204ENST00000504181 ZNF133P52736 654 aaPredicted RBP10.12□□□□□ -0.79
LSM6-204ENST00000504181 ACSM1Q08AH1 577 aa10.12□□□□□ -0.79
LSM6-204ENST00000504181 MAD2L1Q13257 205 aaPredicted RBP10.12□□□□□ -0.79
LSM6-204ENST00000504181 MAB21L1Q13394 359 aa10.12□□□□□ -0.79
LSM6-204ENST00000504181 MPPED2Q15777 294 aa10.12□□□□□ -0.79
LSM6-204ENST00000504181 CCDC153Q494R4 210 aa10.12□□□□□ -0.79
LSM6-204ENST00000504181 INTS11Q5TA45 600 aaKnown RBP10.12□□□□□ -0.79
LSM6-204ENST00000504181 Q6ZS46 218 aa10.12□□□□□ -0.79
LSM6-204ENST00000504181 ZNF621Q6ZSS3 439 aa10.12□□□□□ -0.79
LSM6-204ENST00000504181 TRIML2Q8N7C3 387 aa10.12□□□□□ -0.79
LSM6-204ENST00000504181 SLC38A5Q8WUX1 472 aa10.12□□□□□ -0.79
LSM6-204ENST00000504181 SLC35B4Q969S0 331 aa10.12□□□□□ -0.79
LSM6-204ENST00000504181 ZNF582Q96NG8 517 aaPredicted RBP10.12□□□□□ -0.79
LSM6-204ENST00000504181 CCDC115Q96NT0 180 aa10.12□□□□□ -0.79
LSM6-204ENST00000504181 PANX1Q96RD7 426 aa10.12□□□□□ -0.79
LSM6-204ENST00000504181 ECSITQ9BQ95 431 aa10.12□□□□□ -0.79
LSM6-204ENST00000504181 RNF7Q9UBF6 113 aa10.12□□□□□ -0.79
LSM6-204ENST00000504181 ZMAT5Q9UDW3 170 aaKnown RBP10.12□□□□□ -0.79
LSM6-204ENST00000504181 HIF3AQ9Y2N7 669 aa10.12□□□□□ -0.79
LSM6-204ENST00000504181 A0A1B0GW55 424 aa10.11□□□□□ -0.79
LSM6-204ENST00000504181 CST2P09228 141 aa10.11□□□□□ -0.79
LSM6-204ENST00000504181 DUX4L2P0CJ85 424 aa10.11□□□□□ -0.79
LSM6-204ENST00000504181 DUX4L3P0CJ86 424 aa10.11□□□□□ -0.79
LSM6-204ENST00000504181 DUX4L4P0CJ87 422 aa10.11□□□□□ -0.79
LSM6-204ENST00000504181 DUX4L5P0CJ88 424 aa10.11□□□□□ -0.79
LSM6-204ENST00000504181 DUX4L6P0CJ89 424 aa10.11□□□□□ -0.79
LSM6-204ENST00000504181 DUX4L7P0CJ90 424 aa10.11□□□□□ -0.79
LSM6-204ENST00000504181 FPR3P25089 353 aa10.11□□□□□ -0.79
LSM6-204ENST00000504181 NCALDP61601 193 aa10.11□□□□□ -0.79
LSM6-204ENST00000504181 EMX2Q04743 252 aa10.11□□□□□ -0.79
LSM6-204ENST00000504181 POU4F2Q12837 409 aa10.11□□□□□ -0.79
LSM6-204ENST00000504181 KHDC1LQ5JSQ8 128 aa10.11□□□□□ -0.79
LSM6-204ENST00000504181 FAM27BQ5VT28 67 aa10.11□□□□□ -0.79
LSM6-204ENST00000504181 DUX4L9Q6RFH8 374 aaPredicted RBP10.11□□□□□ -0.79
LSM6-204ENST00000504181 MRPL41Q8IXM3 137 aaKnown RBP10.11□□□□□ -0.79
LSM6-204ENST00000504181 LY6G5BQ8NDX9 201 aa10.11□□□□□ -0.79
LSM6-204ENST00000504181 AENQ8WTP8 325 aaKnown RBP10.11□□□□□ -0.79
LSM6-204ENST00000504181 ASB10Q8WXI3 467 aa10.11□□□□□ -0.79
LSM6-204ENST00000504181 MYDGFQ969H8 173 aa10.11□□□□□ -0.79
LSM6-204ENST00000504181 CITED4Q96RK1 184 aa10.11□□□□□ -0.79
LSM6-204ENST00000504181 TMEM43Q9BTV4 400 aa10.11□□□□□ -0.79
LSM6-204ENST00000504181 NUF2Q9BZD4 464 aa10.11□□□□□ -0.79
LSM6-204ENST00000504181 PRSS22Q9GZN4 317 aa10.11□□□□□ -0.79
LSM6-204ENST00000504181 MEGF9Q9H1U4 602 aa10.11□□□□□ -0.79
LSM6-204ENST00000504181 DUX4Q9UBX2 424 aa10.11□□□□□ -0.79
LSM6-204ENST00000504181 TRAV38-1A0A0B4J264 116 aa10.1□□□□□ -0.79
LSM6-204ENST00000504181 A0A0B4J2E0 115 aa10.1□□□□□ -0.79
LSM6-204ENST00000504181 A0A0G2JPF8 293 aa10.1□□□□□ -0.79
LSM6-204ENST00000504181 A0A1B0GX12 115 aa10.1□□□□□ -0.79
LSM6-204ENST00000504181 A0A1W2PPM1 405 aa10.1□□□□□ -0.79
LSM6-204ENST00000504181 OOEPA6NGQ2 149 aa10.1□□□□□ -0.79
LSM6-204ENST00000504181 HNRNPCL2B2RXH8 293 aa10.1□□□□□ -0.79
LSM6-204ENST00000504181 HNRNPCL3B7ZW38 293 aa10.1□□□□□ -0.79
LSM6-204ENST00000504181 NDUFA2O43678 99 aa10.1□□□□□ -0.79
LSM6-204ENST00000504181 HNRNPCL1O60812 293 aaKnown RBP10.1□□□□□ -0.79
LSM6-204ENST00000504181 RAMP3O60896 148 aa10.1□□□□□ -0.79
LSM6-204ENST00000504181 CH25HO95992 272 aa10.1□□□□□ -0.79
LSM6-204ENST00000504181 THY1P04216 161 aa10.1□□□□□ -0.79
LSM6-204ENST00000504181 HNRNPCL4P0DMR1 293 aa10.1□□□□□ -0.79
LSM6-204ENST00000504181 ACADSP16219 412 aa10.1□□□□□ -0.79
LSM6-204ENST00000504181 RAD23AP54725 363 aa10.1□□□□□ -0.79
LSM6-204ENST00000504181 DSTNP60981 165 aa10.1□□□□□ -0.79
LSM6-204ENST00000504181 CD47Q08722 323 aa10.1□□□□□ -0.79
LSM6-204ENST00000504181 PCLAFQ15004 111 aa10.1□□□□□ -0.79
LSM6-204ENST00000504181 CNN3Q15417 329 aaKnown RBP10.1□□□□□ -0.79
LSM6-204ENST00000504181 OR1Q1Q15612 314 aa10.1□□□□□ -0.79
LSM6-204ENST00000504181 C11orf91Q3C1V1 193 aa10.1□□□□□ -0.79
LSM6-204ENST00000504181 NXNQ6DKJ4 435 aa10.1□□□□□ -0.79
LSM6-204ENST00000504181 TMEM219Q86XT9 240 aa10.1□□□□□ -0.79
LSM6-204ENST00000504181 SBSPONQ8IVN8 264 aa10.1□□□□□ -0.79
LSM6-204ENST00000504181 PIFOQ8TCI5 191 aa10.1□□□□□ -0.79
LSM6-204ENST00000504181 SLC7A6Q92536 515 aa10.1□□□□□ -0.79
LSM6-204ENST00000504181 ERGIC1Q969X5 290 aa10.1□□□□□ -0.79
LSM6-204ENST00000504181 TESCQ96BS2 214 aa10.1□□□□□ -0.79
LSM6-204ENST00000504181 AJUBAQ96IF1 538 aa10.1□□□□□ -0.79
LSM6-204ENST00000504181 COG8Q96MW5 612 aa10.1□□□□□ -0.79
LSM6-204ENST00000504181 ZNF583Q96ND8 569 aa10.1□□□□□ -0.79
LSM6-204ENST00000504181 SEPHS2Q99611 448 aa10.1□□□□□ -0.79
LSM6-204ENST00000504181 MCRIP2Q9BUT9 160 aaKnown RBP10.1□□□□□ -0.79
LSM6-204ENST00000504181 NANSQ9NR45 359 aa10.1□□□□□ -0.79
LSM6-204ENST00000504181 TMEM100Q9NV29 134 aa10.1□□□□□ -0.79
LSM6-204ENST00000504181 ASIC5Q9NY37 505 aa10.1□□□□□ -0.79
LSM6-204ENST00000504181 BTNL2Q9UIR0 455 aa10.1□□□□□ -0.79
LSM6-204ENST00000504181 IGHV3OR15-7A0A075B7D8 119 aa10.09□□□□□ -0.79
LSM6-204ENST00000504181 ZSCAN12O43309 604 aa10.09□□□□□ -0.79
LSM6-204ENST00000504181 DOK2O60496 412 aa10.09□□□□□ -0.79
LSM6-204ENST00000504181 S100A3P33764 101 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms