RNA–Protein interactions for RNA: ENST00000503742.5

UBE2D3-216, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 1 (best)

Gene UBE2D3, Length 1,977 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-216ENST00000503742 FLVCR1Q9Y5Y0 555 aa18.87■□□□□ 0.61
UBE2D3-216ENST00000503742 NCOA6Q14686 2063 aaPredicted RBP18.87■□□□□ 0.61
UBE2D3-216ENST00000503742 SLC17A2O00624 439 aa18.86■□□□□ 0.61
UBE2D3-216ENST00000503742 DHHO43323 396 aa18.86■□□□□ 0.61
UBE2D3-216ENST00000503742 HPNP05981 417 aa18.86■□□□□ 0.61
UBE2D3-216ENST00000503742 ITGA5P08648 1049 aa18.86■□□□□ 0.61
UBE2D3-216ENST00000503742 MSR1P21757 451 aa18.86■□□□□ 0.61
UBE2D3-216ENST00000503742 ART1P52961 327 aa18.86■□□□□ 0.61
UBE2D3-216ENST00000503742 GPR176Q14439 515 aa18.86■□□□□ 0.61
UBE2D3-216ENST00000503742 LINC00696Q6ZRV3 163 aa18.86■□□□□ 0.61
UBE2D3-216ENST00000503742 IZUMO1Q8IYV9 350 aa18.86■□□□□ 0.61
UBE2D3-216ENST00000503742 SMIM4Q8WVI0 70 aa18.86■□□□□ 0.61
UBE2D3-216ENST00000503742 S100A16Q96FQ6 103 aaKnown RBP18.86■□□□□ 0.61
UBE2D3-216ENST00000503742 MOB1AQ9H8S9 216 aa18.86■□□□□ 0.61
UBE2D3-216ENST00000503742 NUFIP1Q9UHK0 495 aaKnown RBP18.86■□□□□ 0.61
UBE2D3-216ENST00000503742 FAM240BA0A1B0GVZ2 78 aa18.86■□□□□ 0.61
UBE2D3-216ENST00000503742 MEIOCA2RUB1 952 aa18.86■□□□□ 0.61
UBE2D3-216ENST00000503742 TPTEP56180 551 aa18.86■□□□□ 0.61
UBE2D3-216ENST00000503742 MOV10Q9HCE1 1003 aaKnown RBP18.86■□□□□ 0.61
UBE2D3-216ENST00000503742 RCE1Q9Y256 329 aa18.86■□□□□ 0.61
UBE2D3-216ENST00000503742 CD3GP09693 182 aa18.85■□□□□ 0.61
UBE2D3-216ENST00000503742 NTF4P34130 210 aa18.85■□□□□ 0.61
UBE2D3-216ENST00000503742 MNDAP41218 407 aa18.85■□□□□ 0.61
UBE2D3-216ENST00000503742 PTH2RP49190 550 aa18.85■□□□□ 0.61
UBE2D3-216ENST00000503742 ENDOGQ14249 297 aaKnown RBP18.85■□□□□ 0.61
UBE2D3-216ENST00000503742 TGIF1Q15583 401 aa18.85■□□□□ 0.61
UBE2D3-216ENST00000503742 SGCAQ16586 387 aa18.85■□□□□ 0.61
UBE2D3-216ENST00000503742 PLET1Q6UQ28 207 aa18.85■□□□□ 0.61
UBE2D3-216ENST00000503742 PRSS45Q7RTY3 260 aa18.85■□□□□ 0.61
UBE2D3-216ENST00000503742 GLCCI1Q86VQ1 547 aa18.85■□□□□ 0.61
UBE2D3-216ENST00000503742 NLKQ9UBE8 527 aa18.85■□□□□ 0.61
UBE2D3-216ENST00000503742 CDK2AP1O14519 115 aa18.84■□□□□ 0.61
UBE2D3-216ENST00000503742 SULT1B1O43704 296 aa18.84■□□□□ 0.61
UBE2D3-216ENST00000503742 LMX1BO60663 402 aa18.84■□□□□ 0.61
UBE2D3-216ENST00000503742 HSD11B1P28845 292 aa18.84■□□□□ 0.61
UBE2D3-216ENST00000503742 SERPINA12Q8IW75 414 aa18.84■□□□□ 0.61
UBE2D3-216ENST00000503742 ROBO4Q8WZ75 1007 aa18.84■□□□□ 0.61
UBE2D3-216ENST00000503742 ZNF275Q9NSD4 429 aaPredicted RBP18.84■□□□□ 0.61
UBE2D3-216ENST00000503742 B4GALT7Q9UBV7 327 aa18.84■□□□□ 0.61
UBE2D3-216ENST00000503742 CACNG2Q9Y698 323 aa18.84■□□□□ 0.61
UBE2D3-216ENST00000503742 EP300Q09472 2414 aaPredicted RBP18.84■□□□□ 0.61
UBE2D3-216ENST00000503742 CTSSP25774 331 aa18.84■□□□□ 0.61
UBE2D3-216ENST00000503742 SLC6A1P30531 599 aa18.84■□□□□ 0.61
UBE2D3-216ENST00000503742 GUCA1AP43080 201 aaPredicted RBP18.84■□□□□ 0.61
UBE2D3-216ENST00000503742 SRP9P49458 86 aaKnown RBP18.84■□□□□ 0.61
UBE2D3-216ENST00000503742 HIST1H3AP68431 136 aa18.84■□□□□ 0.61
UBE2D3-216ENST00000503742 PLA2G7Q13093 441 aa18.84■□□□□ 0.61
UBE2D3-216ENST00000503742 TAF13Q15543 124 aa18.84■□□□□ 0.61
UBE2D3-216ENST00000503742 ATP1A1-AS1Q5TC04 95 aa18.84■□□□□ 0.61
UBE2D3-216ENST00000503742 HIST2H3PS2Q5TEC6 136 aa18.84■□□□□ 0.61
UBE2D3-216ENST00000503742 HIST2H3AQ71DI3 136 aa18.84■□□□□ 0.61
UBE2D3-216ENST00000503742 GALNT16Q8N428 558 aa18.84■□□□□ 0.61
UBE2D3-216ENST00000503742 PLPP7Q8NBV4 271 aa18.84■□□□□ 0.61
UBE2D3-216ENST00000503742 PRSS33Q8NF86 280 aa18.84■□□□□ 0.61
UBE2D3-216ENST00000503742 SLC25A28Q96A46 364 aa18.84■□□□□ 0.61
UBE2D3-216ENST00000503742 MARVELD1Q9BSK0 173 aa18.84■□□□□ 0.61
UBE2D3-216ENST00000503742 TTTY12Q9BZ98 90 aa18.84■□□□□ 0.61
UBE2D3-216ENST00000503742 ULBP2Q9BZM5 246 aa18.84■□□□□ 0.61
UBE2D3-216ENST00000503742 A0A0B4J293 547 aa18.83■□□□□ 0.61
UBE2D3-216ENST00000503742 A0A1B0GTI1 187 aa18.83■□□□□ 0.61
UBE2D3-216ENST00000503742 MEGF11A6BM72 1044 aa18.83■□□□□ 0.61
UBE2D3-216ENST00000503742 TPPPO94811 219 aa18.83■□□□□ 0.61
UBE2D3-216ENST00000503742 CDK2P24941 298 aa18.83■□□□□ 0.61
UBE2D3-216ENST00000503742 BTCP35070 178 aa18.83■□□□□ 0.61
UBE2D3-216ENST00000503742 DDOSTP39656 456 aa18.83■□□□□ 0.61
UBE2D3-216ENST00000503742 RFC3P40938 356 aa18.83■□□□□ 0.61
UBE2D3-216ENST00000503742 KCNJ8Q15842 424 aa18.83■□□□□ 0.61
UBE2D3-216ENST00000503742 RAB11BQ15907 218 aa18.83■□□□□ 0.61
UBE2D3-216ENST00000503742 GLT8D1Q68CQ7 371 aa18.83■□□□□ 0.61
UBE2D3-216ENST00000503742 MDS2Q8NDY4 140 aa18.83■□□□□ 0.61
UBE2D3-216ENST00000503742 OR51D1Q8NGF3 324 aa18.83■□□□□ 0.61
UBE2D3-216ENST00000503742 OR51A2Q8NGJ7 313 aa18.83■□□□□ 0.61
UBE2D3-216ENST00000503742 CPNE4Q96A23 557 aaPredicted RBP18.83■□□□□ 0.61
UBE2D3-216ENST00000503742 RBM24Q9BX46 236 aaKnown RBP18.83■□□□□ 0.61
UBE2D3-216ENST00000503742 PLEKHA1Q9HB21 404 aa18.83■□□□□ 0.61
UBE2D3-216ENST00000503742 ASCL3Q9NQ33 180 aa18.83■□□□□ 0.61
UBE2D3-216ENST00000503742 CELA3AP09093 270 aa18.82■□□□□ 0.6
UBE2D3-216ENST00000503742 LHX2P50458 406 aa18.82■□□□□ 0.6
UBE2D3-216ENST00000503742 PRKXP51817 358 aa18.82■□□□□ 0.6
UBE2D3-216ENST00000503742 GRB2P62993 217 aaKnown RBP18.82■□□□□ 0.6
UBE2D3-216ENST00000503742 PLA1AQ53H76 456 aa18.82■□□□□ 0.6
UBE2D3-216ENST00000503742 CCDC92Q53HC0 331 aaPredicted RBP18.82■□□□□ 0.6
UBE2D3-216ENST00000503742 TMEM53Q6P2H8 277 aa18.82■□□□□ 0.6
UBE2D3-216ENST00000503742 LINGO2Q7L985 606 aa18.82■□□□□ 0.6
UBE2D3-216ENST00000503742 LYPD6Q86Y78 171 aa18.82■□□□□ 0.6
UBE2D3-216ENST00000503742 TOMM5Q8N4H5 51 aa18.82■□□□□ 0.6
UBE2D3-216ENST00000503742 FAM3DQ96BQ1 224 aa18.82■□□□□ 0.6
UBE2D3-216ENST00000503742 ZNF775Q96BV0 537 aaPredicted RBP18.82■□□□□ 0.6
UBE2D3-216ENST00000503742 AUNIPQ9H7T9 357 aa18.82■□□□□ 0.6
UBE2D3-216ENST00000503742 CDV3Q9UKY7 258 aaKnown RBP18.82■□□□□ 0.6
UBE2D3-216ENST00000503742 GABARAPH6UMI1 98 aa18.82■□□□□ 0.6
UBE2D3-216ENST00000503742 SYT7O43581 403 aa18.82■□□□□ 0.6
UBE2D3-216ENST00000503742 CYTIPO60759 359 aa18.82■□□□□ 0.6
UBE2D3-216ENST00000503742 POU3F4P49335 361 aa18.82■□□□□ 0.6
UBE2D3-216ENST00000503742 ZNF84P51523 738 aa18.82■□□□□ 0.6
UBE2D3-216ENST00000503742 ZNF121P58317 390 aaPredicted RBP18.82■□□□□ 0.6
UBE2D3-216ENST00000503742 MRPS34P82930 218 aaKnown RBP18.82■□□□□ 0.6
UBE2D3-216ENST00000503742 RNASE12Q5GAN4 147 aaKnown RBP18.82■□□□□ 0.6
UBE2D3-216ENST00000503742 TMEM69Q5SWH9 247 aa18.82■□□□□ 0.6
UBE2D3-216ENST00000503742 PDSS1Q5T2R2 415 aa18.82■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 91.3 ms