RNA–Protein interactions for RNA: ENST00000503215.5

SCLT1-204, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 1,364 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-204ENST00000503215 PGAM4Q8N0Y7 254 aa13.72□□□□□ -0.21
SCLT1-204ENST00000503215 FANK1Q8TC84 345 aa13.72□□□□□ -0.21
SCLT1-204ENST00000503215 ITLN1Q8WWA0 313 aa13.72□□□□□ -0.21
SCLT1-204ENST00000503215 RAB39BQ96DA2 213 aa13.72□□□□□ -0.21
SCLT1-204ENST00000503215 OR52D1Q9H346 318 aa13.72□□□□□ -0.21
SCLT1-204ENST00000503215 FN3KQ9H479 309 aa13.72□□□□□ -0.21
SCLT1-204ENST00000503215 PTTG3PQ9NZH4 202 aa13.72□□□□□ -0.21
SCLT1-204ENST00000503215 DYSFO75923 2080 aa13.72□□□□□ -0.21
SCLT1-204ENST00000503215 IGHV2-70P01814 119 aa13.71□□□□□ -0.21
SCLT1-204ENST00000503215 ANPEPP15144 967 aa13.71□□□□□ -0.21
SCLT1-204ENST00000503215 HIST1H3AP68431 136 aa13.71□□□□□ -0.21
SCLT1-204ENST00000503215 HIST2H3PS2Q5TEC6 136 aa13.71□□□□□ -0.21
SCLT1-204ENST00000503215 OR2T2Q6IF00 324 aa13.71□□□□□ -0.21
SCLT1-204ENST00000503215 LEG1Q6P5S2 330 aa13.71□□□□□ -0.21
SCLT1-204ENST00000503215 HIST2H3AQ71DI3 136 aa13.71□□□□□ -0.21
SCLT1-204ENST00000503215 NPEPL1Q8NDH3 523 aa13.71□□□□□ -0.21
SCLT1-204ENST00000503215 SEMA6DQ8NFY4 1073 aa13.71□□□□□ -0.21
SCLT1-204ENST00000503215 PTP4A1Q93096 173 aa13.71□□□□□ -0.21
SCLT1-204ENST00000503215 TMEM106BQ9NUM4 274 aa13.71□□□□□ -0.21
SCLT1-204ENST00000503215 CGGBP1Q9UFW8 167 aaPredicted RBP13.71□□□□□ -0.21
SCLT1-204ENST00000503215 OPN4Q9UHM6 478 aa13.71□□□□□ -0.21
SCLT1-204ENST00000503215 TAGLN3Q9UI15 199 aa13.71□□□□□ -0.21
SCLT1-204ENST00000503215 MAGEL2Q9UJ55 1249 aa13.71□□□□□ -0.21
SCLT1-204ENST00000503215 POLR1DQ9Y2S0 133 aa13.71□□□□□ -0.21
SCLT1-204ENST00000503215 NPTNQ9Y639 398 aa13.71□□□□□ -0.21
SCLT1-204ENST00000503215 IGHV3-64DA0A0J9YX35 117 aa13.71□□□□□ -0.22
SCLT1-204ENST00000503215 OR6C68A6NDL8 312 aa13.71□□□□□ -0.22
SCLT1-204ENST00000503215 OR10H3O60404 316 aa13.71□□□□□ -0.22
SCLT1-204ENST00000503215 FPR3P25089 353 aa13.71□□□□□ -0.22
SCLT1-204ENST00000503215 RRM2P31350 389 aa13.71□□□□□ -0.22
SCLT1-204ENST00000503215 GSSP48637 474 aa13.71□□□□□ -0.22
SCLT1-204ENST00000503215 SEC61A1P61619 476 aaKnown RBP13.71□□□□□ -0.22
SCLT1-204ENST00000503215 SAMD4BQ5PRF9 694 aaKnown RBP13.71□□□□□ -0.22
SCLT1-204ENST00000503215 SLC35F1Q5T1Q4 408 aa13.71□□□□□ -0.22
SCLT1-204ENST00000503215 CFAP77Q6ZQR2 320 aa13.71□□□□□ -0.22
SCLT1-204ENST00000503215 PIGWQ7Z7B1 504 aa13.71□□□□□ -0.22
SCLT1-204ENST00000503215 NAA40Q86UY6 237 aa13.71□□□□□ -0.22
SCLT1-204ENST00000503215 LINC00346Q8IVM7 164 aa13.71□□□□□ -0.22
SCLT1-204ENST00000503215 DEFB107AQ8IZN7 70 aa13.71□□□□□ -0.22
SCLT1-204ENST00000503215 SLC26A10Q8NG04 563 aa13.71□□□□□ -0.22
SCLT1-204ENST00000503215 NSMCE2Q96MF7 247 aa13.71□□□□□ -0.22
SCLT1-204ENST00000503215 SIGLEC11Q96RL6 698 aa13.71□□□□□ -0.22
SCLT1-204ENST00000503215 DIRC2Q96SL1 478 aa13.71□□□□□ -0.22
SCLT1-204ENST00000503215 IFT27Q9BW83 186 aa13.71□□□□□ -0.22
SCLT1-204ENST00000503215 WDR76Q9H967 626 aa13.71□□□□□ -0.22
SCLT1-204ENST00000503215 RPRD1BQ9NQG5 326 aaKnown RBP13.71□□□□□ -0.22
SCLT1-204ENST00000503215 TANC2Q9HCD6 1990 aa13.7□□□□□ -0.22
SCLT1-204ENST00000503215 A0A0G2JMP0 313 aa13.7□□□□□ -0.22
SCLT1-204ENST00000503215 A0A0X1KG70 313 aa13.7□□□□□ -0.22
SCLT1-204ENST00000503215 H0YL77 283 aa13.7□□□□□ -0.22
SCLT1-204ENST00000503215 ARPC3O15145 178 aa13.7□□□□□ -0.22
SCLT1-204ENST00000503215 RAC2P15153 192 aa13.7□□□□□ -0.22
SCLT1-204ENST00000503215 EPHA1P21709 976 aa13.7□□□□□ -0.22
SCLT1-204ENST00000503215 CRABP1P29762 137 aa13.7□□□□□ -0.22
SCLT1-204ENST00000503215 SLC6A6P31641 620 aa13.7□□□□□ -0.22
SCLT1-204ENST00000503215 SMIM11AP58511 58 aa13.7□□□□□ -0.22
SCLT1-204ENST00000503215 ZMYND11Q15326 602 aa13.7□□□□□ -0.22
SCLT1-204ENST00000503215 ZMAT1Q5H9K5 638 aa13.7□□□□□ -0.22
SCLT1-204ENST00000503215 DCAF12L2Q5VW00 463 aa13.7□□□□□ -0.22
SCLT1-204ENST00000503215 PGBD2Q6P3X8 592 aa13.7□□□□□ -0.22
SCLT1-204ENST00000503215 ZNF283Q8N7M2 679 aa13.7□□□□□ -0.22
SCLT1-204ENST00000503215 SDR9C7Q8NEX9 313 aa13.7□□□□□ -0.22
SCLT1-204ENST00000503215 OR4M2Q8NGB6 313 aa13.7□□□□□ -0.22
SCLT1-204ENST00000503215 OR10AD1Q8NGE0 317 aa13.7□□□□□ -0.22
SCLT1-204ENST00000503215 ZNRF4Q8WWF5 429 aa13.7□□□□□ -0.22
SCLT1-204ENST00000503215 OR2V2Q96R30 315 aa13.7□□□□□ -0.22
SCLT1-204ENST00000503215 NSRP1Q9H0G5 558 aaKnown RBP13.7□□□□□ -0.22
SCLT1-204ENST00000503215 EGLN3Q9H6Z9 239 aa13.7□□□□□ -0.22
SCLT1-204ENST00000503215 IL1RAPQ9NPH3 570 aa13.7□□□□□ -0.22
SCLT1-204ENST00000503215 KRCC1Q9NPI7 259 aaPredicted RBP13.7□□□□□ -0.22
SCLT1-204ENST00000503215 MMP26Q9NRE1 261 aa13.7□□□□□ -0.22
SCLT1-204ENST00000503215 ARL2BPQ9Y2Y0 163 aa13.7□□□□□ -0.22
SCLT1-204ENST00000503215 NBEAL1Q6ZS30 2694 aa13.69□□□□□ -0.22
SCLT1-204ENST00000503215 ANK2Q01484 3957 aa13.69□□□□□ -0.22
SCLT1-204ENST00000503215 ZNF205O95201 554 aa13.69□□□□□ -0.22
SCLT1-204ENST00000503215 FABP3P05413 133 aa13.69□□□□□ -0.22
SCLT1-204ENST00000503215 ATP6V1B2P21281 511 aa13.69□□□□□ -0.22
SCLT1-204ENST00000503215 TUBG1P23258 451 aa13.69□□□□□ -0.22
SCLT1-204ENST00000503215 ANOS1P23352 680 aa13.69□□□□□ -0.22
SCLT1-204ENST00000503215 GGT2P36268 569 aa13.69□□□□□ -0.22
SCLT1-204ENST00000503215 SLC3A1Q07837 685 aa13.69□□□□□ -0.22
SCLT1-204ENST00000503215 COX10Q12887 443 aa13.69□□□□□ -0.22
SCLT1-204ENST00000503215 KRTAP27-1Q3LI81 207 aa13.69□□□□□ -0.22
SCLT1-204ENST00000503215 CLEC12AQ5QGZ9 265 aa13.69□□□□□ -0.22
SCLT1-204ENST00000503215 SLC18B1Q6NT16 456 aa13.69□□□□□ -0.22
SCLT1-204ENST00000503215 CYP2R1Q6VVX0 501 aa13.69□□□□□ -0.22
SCLT1-204ENST00000503215 FBXW12Q6X9E4 464 aa13.69□□□□□ -0.22
SCLT1-204ENST00000503215 ZNF620Q6ZNG0 422 aa13.69□□□□□ -0.22
SCLT1-204ENST00000503215 PEG10Q86TG7 708 aaKnown RBP13.69□□□□□ -0.22
SCLT1-204ENST00000503215 JAZF1Q86VZ6 243 aa13.69□□□□□ -0.22
SCLT1-204ENST00000503215 ZDHHC21Q8IVQ6 265 aa13.69□□□□□ -0.22
SCLT1-204ENST00000503215 ATG16L2Q8NAA4 619 aa13.69□□□□□ -0.22
SCLT1-204ENST00000503215 GJC3Q8NFK1 279 aa13.69□□□□□ -0.22
SCLT1-204ENST00000503215 OR9Q2Q8NGE9 314 aa13.69□□□□□ -0.22
SCLT1-204ENST00000503215 OR52E2Q8NGJ4 325 aa13.69□□□□□ -0.22
SCLT1-204ENST00000503215 MCUR1Q96AQ8 359 aa13.69□□□□□ -0.22
SCLT1-204ENST00000503215 C7orf69Q9H7B7 122 aa13.69□□□□□ -0.22
SCLT1-204ENST00000503215 TUBG2Q9NRH3 451 aa13.69□□□□□ -0.22
SCLT1-204ENST00000503215 MRPL22Q9NWU5 206 aaKnown RBP13.69□□□□□ -0.22
SCLT1-204ENST00000503215 TRAPPC2LH3BP13 241 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms