RNA–Protein interactions for RNA: ENST00000502971.5

PTPN13-205, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

TSL 1 (best) BASIC

Gene PTPN13, Length 1,708 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-205ENST00000502971 SCN1BQ07699 218 aa19.41■□□□□ 0.7
PTPN13-205ENST00000502971 FAM27BQ5VT28 67 aa19.41■□□□□ 0.7
PTPN13-205ENST00000502971 OR5H6Q8NGV6 325 aa19.41■□□□□ 0.7
PTPN13-205ENST00000502971 SNIP1Q8TAD8 396 aaKnown RBP19.41■□□□□ 0.7
PTPN13-205ENST00000502971 DDX28Q9NUL7 540 aaKnown RBP19.41■□□□□ 0.7
PTPN13-205ENST00000502971 CACNA1CQ13936 2221 aa19.41■□□□□ 0.7
PTPN13-205ENST00000502971 LOC107986453A0A1B0GWG9 222 aa19.4■□□□□ 0.7
PTPN13-205ENST00000502971 ANXA2P2A6NMY6 339 aa19.4■□□□□ 0.7
PTPN13-205ENST00000502971 ANXA2P07355 339 aaKnown RBP19.4■□□□□ 0.7
PTPN13-205ENST00000502971 ADRB1P08588 477 aa19.4■□□□□ 0.7
PTPN13-205ENST00000502971 FSTP19883 344 aa19.4■□□□□ 0.7
PTPN13-205ENST00000502971 CTSSP25774 331 aa19.4■□□□□ 0.7
PTPN13-205ENST00000502971 HIST1H3AP68431 136 aa19.4■□□□□ 0.7
PTPN13-205ENST00000502971 P2RY14Q15391 338 aa19.4■□□□□ 0.7
PTPN13-205ENST00000502971 DEFB109BQ30KR1 87 aa19.4■□□□□ 0.7
PTPN13-205ENST00000502971 HES5Q5TA89 166 aa19.4■□□□□ 0.7
PTPN13-205ENST00000502971 HIST2H3PS2Q5TEC6 136 aa19.4■□□□□ 0.7
PTPN13-205ENST00000502971 HIST2H3AQ71DI3 136 aa19.4■□□□□ 0.7
PTPN13-205ENST00000502971 OR4M1Q8NGD0 313 aa19.4■□□□□ 0.7
PTPN13-205ENST00000502971 KCNJ15Q99712 375 aa19.4■□□□□ 0.7
PTPN13-205ENST00000502971 ZDHHC11Q9H8X9 412 aa19.4■□□□□ 0.7
PTPN13-205ENST00000502971 EMC3Q9P0I2 261 aa19.4■□□□□ 0.7
PTPN13-205ENST00000502971 CKLFQ9UBR5 152 aa19.4■□□□□ 0.7
PTPN13-205ENST00000502971 MALT1Q9UDY8 824 aa19.4■□□□□ 0.7
PTPN13-205ENST00000502971 NUFIP1Q9UHK0 495 aaKnown RBP19.4■□□□□ 0.7
PTPN13-205ENST00000502971 H3BSH0 61 aa19.39■□□□□ 0.7
PTPN13-205ENST00000502971 CEACAM4O75871 244 aa19.39■□□□□ 0.7
PTPN13-205ENST00000502971 MAS1P04201 325 aa19.39■□□□□ 0.7
PTPN13-205ENST00000502971 ITGB2P05107 769 aa19.39■□□□□ 0.7
PTPN13-205ENST00000502971 CALCBP10092 127 aa19.39■□□□□ 0.7
PTPN13-205ENST00000502971 Q8N402 240 aa19.39■□□□□ 0.7
PTPN13-205ENST00000502971 OR13C3Q8NGS6 347 aa19.39■□□□□ 0.7
PTPN13-205ENST00000502971 LDAHQ9H6V9 325 aa19.39■□□□□ 0.7
PTPN13-205ENST00000502971 RNF122Q9H9V4 155 aa19.39■□□□□ 0.7
PTPN13-205ENST00000502971 CRLF2Q9HC73 371 aa19.39■□□□□ 0.7
PTPN13-205ENST00000502971 TRGV5A0A0B4J1U4 118 aa19.39■□□□□ 0.69
PTPN13-205ENST00000502971 A0A0B4J203 849 aa19.39■□□□□ 0.69
PTPN13-205ENST00000502971 A0A1W2PQ09 198 aa19.39■□□□□ 0.69
PTPN13-205ENST00000502971 TTRP02766 147 aa19.39■□□□□ 0.69
PTPN13-205ENST00000502971 CFPP27918 469 aa19.39■□□□□ 0.69
PTPN13-205ENST00000502971 PITPNBP48739 271 aa19.39■□□□□ 0.69
PTPN13-205ENST00000502971 UBE2NLQ5JXB2 153 aa19.39■□□□□ 0.69
PTPN13-205ENST00000502971 LGALS14Q8TCE9 139 aa19.39■□□□□ 0.69
PTPN13-205ENST00000502971 DEFB127Q9H1M4 99 aa19.39■□□□□ 0.69
PTPN13-205ENST00000502971 TBC1D24Q9ULP9 559 aa19.39■□□□□ 0.69
PTPN13-205ENST00000502971 NOSIPQ9Y314 301 aaKnown RBP19.39■□□□□ 0.69
PTPN13-205ENST00000502971 FREM2Q5SZK8 3169 aa19.39■□□□□ 0.69
PTPN13-205ENST00000502971 P2RY10O00398 339 aa19.38■□□□□ 0.69
PTPN13-205ENST00000502971 ACSM4P0C7M7 580 aa19.38■□□□□ 0.69
PTPN13-205ENST00000502971 IGFBP3P17936 291 aaPredicted RBP19.38■□□□□ 0.69
PTPN13-205ENST00000502971 SCAND1P57086 179 aa19.38■□□□□ 0.69
PTPN13-205ENST00000502971 BAIAP2L2Q6UXY1 529 aa19.38■□□□□ 0.69
PTPN13-205ENST00000502971 ZNF837Q96EG3 531 aaPredicted RBP19.38■□□□□ 0.69
PTPN13-205ENST00000502971 EXO5Q9H790 373 aa19.38■□□□□ 0.69
PTPN13-205ENST00000502971 TMEM38BQ9NVV0 291 aa19.38■□□□□ 0.69
PTPN13-205ENST00000502971 PARPBPQ9NWS1 579 aa19.38■□□□□ 0.69
PTPN13-205ENST00000502971 RABL2AQ9UBK7 228 aaPredicted RBP19.38■□□□□ 0.69
PTPN13-205ENST00000502971 RABL2BQ9UNT1 228 aa19.38■□□□□ 0.69
PTPN13-205ENST00000502971 PCDHGA9Q9Y5G4 932 aaKnown RBP19.38■□□□□ 0.69
PTPN13-205ENST00000502971 CSAG2Q9Y5P2 127 aa19.38■□□□□ 0.69
PTPN13-205ENST00000502971 LIPGQ9Y5X9 500 aa19.38■□□□□ 0.69
PTPN13-205ENST00000502971 KCNMB2Q9Y691 235 aa19.38■□□□□ 0.69
PTPN13-205ENST00000502971 ASPMQ8IZT6 3477 aa19.37■□□□□ 0.69
PTPN13-205ENST00000502971 TRAV17A0A0B4J275 112 aa19.37■□□□□ 0.69
PTPN13-205ENST00000502971 PFDN1O60925 122 aa19.37■□□□□ 0.69
PTPN13-205ENST00000502971 HLA-DQB1P01920 261 aa19.37■□□□□ 0.69
PTPN13-205ENST00000502971 CST2P09228 141 aa19.37■□□□□ 0.69
PTPN13-205ENST00000502971 CPN1P15169 458 aa19.37■□□□□ 0.69
PTPN13-205ENST00000502971 MADCAM1Q13477 382 aa19.37■□□□□ 0.69
PTPN13-205ENST00000502971 PYHIN1Q6K0P9 492 aa19.37■□□□□ 0.69
PTPN13-205ENST00000502971 CHMP1BQ7LBR1 199 aa19.37■□□□□ 0.69
PTPN13-205ENST00000502971 LRRC18Q8N456 261 aa19.37■□□□□ 0.69
PTPN13-205ENST00000502971 PRRG4Q9BZD6 226 aa19.37■□□□□ 0.69
PTPN13-205ENST00000502971 LINC00470Q9BZP3 86 aa19.37■□□□□ 0.69
PTPN13-205ENST00000502971 LIN7BQ9HAP6 207 aa19.37■□□□□ 0.69
PTPN13-205ENST00000502971 ETV7Q9Y603 341 aa19.37■□□□□ 0.69
PTPN13-205ENST00000502971 ZNF724A8MTY0 619 aa19.37■□□□□ 0.69
PTPN13-205ENST00000502971 MRPL33O75394 65 aaKnown RBP19.37■□□□□ 0.69
PTPN13-205ENST00000502971 NR4A2P43354 598 aa19.37■□□□□ 0.69
PTPN13-205ENST00000502971 CX3CR1P49238 355 aa19.37■□□□□ 0.69
PTPN13-205ENST00000502971 PRKXP51817 358 aa19.37■□□□□ 0.69
PTPN13-205ENST00000502971 ZNF121P58317 390 aaPredicted RBP19.37■□□□□ 0.69
PTPN13-205ENST00000502971 RNPS1Q15287 305 aaKnown RBP19.37■□□□□ 0.69
PTPN13-205ENST00000502971 RNFT1Q5M7Z0 435 aa19.37■□□□□ 0.69
PTPN13-205ENST00000502971 TRIQKQ629K1 86 aa19.37■□□□□ 0.69
PTPN13-205ENST00000502971 ASPHD2Q6ICH7 369 aa19.37■□□□□ 0.69
PTPN13-205ENST00000502971 LUZP2Q86TE4 346 aa19.37■□□□□ 0.69
PTPN13-205ENST00000502971 BCO1Q9HAY6 547 aa19.37■□□□□ 0.69
PTPN13-205ENST00000502971 GPR35Q9HC97 309 aa19.37■□□□□ 0.69
PTPN13-205ENST00000502971 STEAP1Q9UHE8 339 aa19.37■□□□□ 0.69
PTPN13-205ENST00000502971 A0A0G2JMP0 313 aa19.36■□□□□ 0.69
PTPN13-205ENST00000502971 A0A0X1KG70 313 aa19.36■□□□□ 0.69
PTPN13-205ENST00000502971 MEGF11A6BM72 1044 aa19.36■□□□□ 0.69
PTPN13-205ENST00000502971 OR6C65A6NJZ3 312 aa19.36■□□□□ 0.69
PTPN13-205ENST00000502971 ASAH1Q13510 395 aa19.36■□□□□ 0.69
PTPN13-205ENST00000502971 STK11Q15831 433 aa19.36■□□□□ 0.69
PTPN13-205ENST00000502971 CCDC92Q53HC0 331 aaPredicted RBP19.36■□□□□ 0.69
PTPN13-205ENST00000502971 ELFN2Q5R3F8 820 aa19.36■□□□□ 0.69
PTPN13-205ENST00000502971 GDPD3Q7L5L3 318 aa19.36■□□□□ 0.69
PTPN13-205ENST00000502971 ZNF283Q8N7M2 679 aa19.36■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms