RNA–Protein interactions for RNA: ENST00000502850.5

NUP54-202, Transcript of nucleoporin 54, humanhuman

TSL 1 (best)

Gene NUP54, Length 1,604 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-202ENST00000502850 CCDC107Q8WV48 283 aa10.68□□□□□ -0.7
NUP54-202ENST00000502850 SLC25A28Q96A46 364 aa10.68□□□□□ -0.7
NUP54-202ENST00000502850 OR5B2Q96R09 309 aa10.68□□□□□ -0.7
NUP54-202ENST00000502850 UQCC2Q9BRT2 126 aa10.68□□□□□ -0.7
NUP54-202ENST00000502850 CLEC4MQ9H2X3 399 aaPredicted RBP10.68□□□□□ -0.7
NUP54-202ENST00000502850 NPDC1Q9NQX5 325 aaPredicted RBP10.68□□□□□ -0.7
NUP54-202ENST00000502850 CENPMQ9NSP4 180 aa10.68□□□□□ -0.7
NUP54-202ENST00000502850 OCIAD1Q9NX40 245 aa10.68□□□□□ -0.7
NUP54-202ENST00000502850 DCHS1Q96JQ0 3298 aa10.67□□□□□ -0.7
NUP54-202ENST00000502850 IGHV1-45A0A0A0MS14 117 aa10.67□□□□□ -0.7
NUP54-202ENST00000502850 A0A1W2PPL8 197 aa10.67□□□□□ -0.7
NUP54-202ENST00000502850 ANKRD34BA5PLL1 514 aa10.67□□□□□ -0.7
NUP54-202ENST00000502850 AQP7P3A6NL99 342 aa10.67□□□□□ -0.7
NUP54-202ENST00000502850 ZNF726A6NNF4 738 aa10.67□□□□□ -0.7
NUP54-202ENST00000502850 PMS2P2O95744 297 aa10.67□□□□□ -0.7
NUP54-202ENST00000502850 WNT11O96014 354 aa10.67□□□□□ -0.7
NUP54-202ENST00000502850 MELTFP08582 738 aa10.67□□□□□ -0.7
NUP54-202ENST00000502850 TMIGD3P0DMS9 266 aaPredicted RBP10.67□□□□□ -0.7
NUP54-202ENST00000502850 ZNF43P17038 809 aa10.67□□□□□ -0.7
NUP54-202ENST00000502850 BDKRB2P30411 391 aa10.67□□□□□ -0.7
NUP54-202ENST00000502850 HTR2BP41595 481 aa10.67□□□□□ -0.7
NUP54-202ENST00000502850 EIF3IQ13347 325 aaKnown RBP10.67□□□□□ -0.7
NUP54-202ENST00000502850 CAMK2DQ13557 499 aa10.67□□□□□ -0.7
NUP54-202ENST00000502850 KCNMB1Q16558 191 aa10.67□□□□□ -0.7
NUP54-202ENST00000502850 STPG1Q5TH74 334 aa10.67□□□□□ -0.7
NUP54-202ENST00000502850 ASPHD2Q6ICH7 369 aa10.67□□□□□ -0.7
NUP54-202ENST00000502850 JAGN1Q8N5M9 183 aa10.67□□□□□ -0.7
NUP54-202ENST00000502850 TMEM229BQ8NBD8 167 aa10.67□□□□□ -0.7
NUP54-202ENST00000502850 OR4C16Q8NGL9 310 aa10.67□□□□□ -0.7
NUP54-202ENST00000502850 LOXL4Q96JB6 756 aa10.67□□□□□ -0.7
NUP54-202ENST00000502850 NPAS1Q99742 590 aa10.67□□□□□ -0.7
NUP54-202ENST00000502850 NUDT16L1Q9BRJ7 211 aaKnown RBP10.67□□□□□ -0.7
NUP54-202ENST00000502850 GINS4Q9BRT9 223 aa10.67□□□□□ -0.7
NUP54-202ENST00000502850 APMAPQ9HDC9 416 aa10.67□□□□□ -0.7
NUP54-202ENST00000502850 FAM206AQ9NX38 181 aa10.67□□□□□ -0.7
NUP54-202ENST00000502850 B3GNT2Q9NY97 397 aa10.67□□□□□ -0.7
NUP54-202ENST00000502850 MGAT4CQ9UBM8 478 aa10.67□□□□□ -0.7
NUP54-202ENST00000502850 ZNF69Q9UC07 566 aa10.67□□□□□ -0.7
NUP54-202ENST00000502850 RAB22AQ9UL26 194 aa10.67□□□□□ -0.7
NUP54-202ENST00000502850 H3BSH0 61 aa10.66□□□□□ -0.7
NUP54-202ENST00000502850 NTN3O00634 580 aaPredicted RBP10.66□□□□□ -0.7
NUP54-202ENST00000502850 SYT7O43581 403 aa10.66□□□□□ -0.7
NUP54-202ENST00000502850 TRAF3IP2O43734 574 aaPredicted RBP10.66□□□□□ -0.7
NUP54-202ENST00000502850 EIF1BO60739 113 aaKnown RBP10.66□□□□□ -0.7
NUP54-202ENST00000502850 VAMP5O95183 116 aa10.66□□□□□ -0.7
NUP54-202ENST00000502850 BPNT1O95861 308 aa10.66□□□□□ -0.7
NUP54-202ENST00000502850 ACSM4P0C7M7 580 aa10.66□□□□□ -0.7
NUP54-202ENST00000502850 ZNF17P17021 662 aa10.66□□□□□ -0.7
NUP54-202ENST00000502850 GSK3AP49840 483 aa10.66□□□□□ -0.7
NUP54-202ENST00000502850 EFNB2P52799 333 aa10.66□□□□□ -0.7
NUP54-202ENST00000502850 PER3P56645 1201 aa10.66□□□□□ -0.7
NUP54-202ENST00000502850 SNRPD2P62316 118 aaKnown RBP10.66□□□□□ -0.7
NUP54-202ENST00000502850 MC2RQ01718 297 aa10.66□□□□□ -0.7
NUP54-202ENST00000502850 ZMYND11Q15326 602 aa10.66□□□□□ -0.7
NUP54-202ENST00000502850 TAF13Q15543 124 aa10.66□□□□□ -0.7
NUP54-202ENST00000502850 TMEM255AQ5JRV8 349 aa10.66□□□□□ -0.7
NUP54-202ENST00000502850 ZBTB37Q5TC79 503 aa10.66□□□□□ -0.7
NUP54-202ENST00000502850 STEAP1BQ6NZ63 245 aa10.66□□□□□ -0.7
NUP54-202ENST00000502850 NHLRC1Q6VVB1 395 aa10.66□□□□□ -0.7
NUP54-202ENST00000502850 MDGA2Q7Z553 956 aa10.66□□□□□ -0.7
NUP54-202ENST00000502850 GTPBP8Q8N3Z3 284 aaPredicted RBP10.66□□□□□ -0.7
NUP54-202ENST00000502850 SLC22A24Q8N4F4 322 aa10.66□□□□□ -0.7
NUP54-202ENST00000502850 BMPERQ8N8U9 685 aa10.66□□□□□ -0.7
NUP54-202ENST00000502850 CLEC1AQ8NC01 280 aa10.66□□□□□ -0.7
NUP54-202ENST00000502850 BEST4Q8NFU0 473 aa10.66□□□□□ -0.7
NUP54-202ENST00000502850 OR5D14Q8NGL3 314 aa10.66□□□□□ -0.7
NUP54-202ENST00000502850 OR2T35Q8NGX2 323 aa10.66□□□□□ -0.7
NUP54-202ENST00000502850 SNAPC3Q92966 411 aa10.66□□□□□ -0.7
NUP54-202ENST00000502850 MR1Q95460 341 aa10.66□□□□□ -0.7
NUP54-202ENST00000502850 ZC3H10Q96K80 434 aaKnown RBP10.66□□□□□ -0.7
NUP54-202ENST00000502850 SLC25A21Q9BQT8 299 aaPredicted RBP10.66□□□□□ -0.7
NUP54-202ENST00000502850 PBOV1Q9GZY1 135 aa10.66□□□□□ -0.7
NUP54-202ENST00000502850 METTL17Q9H7H0 456 aaPredicted RBP10.66□□□□□ -0.7
NUP54-202ENST00000502850 TMEM138Q9NPI0 162 aa10.66□□□□□ -0.7
NUP54-202ENST00000502850 FLVCR2Q9UPI3 526 aa10.66□□□□□ -0.7
NUP54-202ENST00000502850 CHCHD2Q9Y6H1 151 aaPredicted RBP10.66□□□□□ -0.7
NUP54-202ENST00000502850 KIF26BQ2KJY2 2108 aa10.66□□□□□ -0.7
NUP54-202ENST00000502850 ASCC3Q8N3C0 2202 aaKnown RBP10.66□□□□□ -0.7
NUP54-202ENST00000502850 GJE1A6NN92 205 aa10.66□□□□□ -0.7
NUP54-202ENST00000502850 SULT2B1O00204 365 aa10.66□□□□□ -0.7
NUP54-202ENST00000502850 P2RY10O00398 339 aa10.66□□□□□ -0.7
NUP54-202ENST00000502850 LDLRAD4O15165 306 aa10.66□□□□□ -0.7
NUP54-202ENST00000502850 AKR7A2O43488 359 aa10.66□□□□□ -0.7
NUP54-202ENST00000502850 EFNA2O43921 213 aa10.66□□□□□ -0.7
NUP54-202ENST00000502850 RAD1O60671 282 aa10.66□□□□□ -0.7
NUP54-202ENST00000502850 RGS11O94810 467 aa10.66□□□□□ -0.7
NUP54-202ENST00000502850 CYB5AP00167 134 aa10.66□□□□□ -0.7
NUP54-202ENST00000502850 IFNA7P01567 189 aa10.66□□□□□ -0.7
NUP54-202ENST00000502850 HPXP02790 462 aa10.66□□□□□ -0.7
NUP54-202ENST00000502850 ZNF20P17024 532 aa10.66□□□□□ -0.7
NUP54-202ENST00000502850 RAB3AP20336 220 aa10.66□□□□□ -0.7
NUP54-202ENST00000502850 GUCA1AP43080 201 aaPredicted RBP10.66□□□□□ -0.7
NUP54-202ENST00000502850 RAD52P43351 418 aa10.66□□□□□ -0.7
NUP54-202ENST00000502850 SSR4P51571 173 aa10.66□□□□□ -0.7
NUP54-202ENST00000502850 P2RY4P51582 365 aa10.66□□□□□ -0.7
NUP54-202ENST00000502850 ZP1P60852 638 aa10.66□□□□□ -0.7
NUP54-202ENST00000502850 GRB2P62993 217 aaKnown RBP10.66□□□□□ -0.7
NUP54-202ENST00000502850 GALK2Q01415 458 aa10.66□□□□□ -0.7
NUP54-202ENST00000502850 DHODHQ02127 395 aa10.66□□□□□ -0.7
NUP54-202ENST00000502850 IKZF1Q13422 519 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms