RNA–Protein interactions for RNA: ENST00000502820.1

HTT-202, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 287 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-202ENST00000502820 POU4F2Q12837 409 aa4.59□□□□□ -1.67
HTT-202ENST00000502820 CHD3Q12873 2000 aaKnown RBP4.59□□□□□ -1.67
HTT-202ENST00000502820 KLF9Q13886 244 aaPredicted RBP4.59□□□□□ -1.67
HTT-202ENST00000502820 PDE7AQ13946 482 aa4.59□□□□□ -1.67
HTT-202ENST00000502820 SERTAD2Q14140 314 aa4.59□□□□□ -1.67
HTT-202ENST00000502820 HLXQ14774 488 aaPredicted RBP4.59□□□□□ -1.67
HTT-202ENST00000502820 LAPTM4AQ15012 233 aa4.59□□□□□ -1.67
HTT-202ENST00000502820 P2RY14Q15391 338 aa4.59□□□□□ -1.67
HTT-202ENST00000502820 TMEM249Q2WGJ8 235 aa4.59□□□□□ -1.67
HTT-202ENST00000502820 UBE2NLQ5JXB2 153 aa4.59□□□□□ -1.67
HTT-202ENST00000502820 FAM120AOSQ5T036 256 aa4.59□□□□□ -1.67
HTT-202ENST00000502820 KHDRBS2Q5VWX1 349 aaKnown RBP4.59□□□□□ -1.67
HTT-202ENST00000502820 NSUN5P2Q63ZY6 315 aa4.59□□□□□ -1.67
HTT-202ENST00000502820 VASNQ6EMK4 673 aa4.59□□□□□ -1.67
HTT-202ENST00000502820 MRM1Q6IN84 353 aaKnown RBP4.59□□□□□ -1.67
HTT-202ENST00000502820 REEP3Q6NUK4 255 aa4.59□□□□□ -1.67
HTT-202ENST00000502820 RPL13AP3Q6NVV1 102 aa4.59□□□□□ -1.67
HTT-202ENST00000502820 SFXN4Q6P4A7 337 aa4.59□□□□□ -1.67
HTT-202ENST00000502820 LYPD4Q6UWN0 246 aa4.59□□□□□ -1.67
HTT-202ENST00000502820 BEND4Q6ZU67 534 aa4.59□□□□□ -1.67
HTT-202ENST00000502820 MOB3CQ70IA8 216 aa4.59□□□□□ -1.67
HTT-202ENST00000502820 NLRC3Q7RTR2 1065 aa4.59□□□□□ -1.67
HTT-202ENST00000502820 KRT77Q7Z794 578 aa4.59□□□□□ -1.67
HTT-202ENST00000502820 JAZF1Q86VZ6 243 aa4.59□□□□□ -1.67
HTT-202ENST00000502820 WFDC8Q8IUA0 241 aa4.59□□□□□ -1.67
HTT-202ENST00000502820 KRTCAP2Q8N6L1 136 aa4.59□□□□□ -1.67
HTT-202ENST00000502820 C15orf54Q8N8G6 183 aa4.59□□□□□ -1.67
HTT-202ENST00000502820 ACOT4Q8N9L9 421 aa4.59□□□□□ -1.67
HTT-202ENST00000502820 ZNF485Q8NCK3 441 aa4.59□□□□□ -1.67
HTT-202ENST00000502820 BEST4Q8NFU0 473 aa4.59□□□□□ -1.67
HTT-202ENST00000502820 HUS1BQ8NHY5 278 aa4.59□□□□□ -1.67
HTT-202ENST00000502820 SLC2A12Q8TD20 617 aa4.59□□□□□ -1.67
HTT-202ENST00000502820 PTPMT1Q8WUK0 201 aaPredicted RBP4.59□□□□□ -1.67
HTT-202ENST00000502820 CCDC107Q8WV48 283 aa4.59□□□□□ -1.67
HTT-202ENST00000502820 UBE2FQ969M7 185 aa4.59□□□□□ -1.67
HTT-202ENST00000502820 UBE2E3Q969T4 207 aa4.59□□□□□ -1.67
HTT-202ENST00000502820 CPNE4Q96A23 557 aaPredicted RBP4.59□□□□□ -1.67
HTT-202ENST00000502820 ZMYND19Q96E35 227 aaPredicted RBP4.59□□□□□ -1.67
HTT-202ENST00000502820 MRPS24Q96EL2 167 aaKnown RBP4.59□□□□□ -1.67
HTT-202ENST00000502820 ZNF582Q96NG8 517 aaPredicted RBP4.59□□□□□ -1.67
HTT-202ENST00000502820 RASL10BQ96S79 203 aa4.59□□□□□ -1.67
HTT-202ENST00000502820 TSNAXQ99598 290 aaKnown RBP4.59□□□□□ -1.67
HTT-202ENST00000502820 SEC11CQ9BY50 192 aa4.59□□□□□ -1.67
HTT-202ENST00000502820 ALX4Q9H161 411 aaPredicted RBP4.59□□□□□ -1.67
HTT-202ENST00000502820 SLCO5A1Q9H2Y9 848 aa4.59□□□□□ -1.67
HTT-202ENST00000502820 ZCCHC4Q9H5U6 513 aa4.59□□□□□ -1.67
HTT-202ENST00000502820 METTL17Q9H7H0 456 aaPredicted RBP4.59□□□□□ -1.67
HTT-202ENST00000502820 MYOZ1Q9NP98 299 aaPredicted RBP4.59□□□□□ -1.67
HTT-202ENST00000502820 SDHAF3Q9NRP4 125 aa4.59□□□□□ -1.67
HTT-202ENST00000502820 MAN2C1Q9NTJ4 1040 aa4.59□□□□□ -1.67
HTT-202ENST00000502820 UFSP2Q9NUQ7 469 aa4.59□□□□□ -1.67
HTT-202ENST00000502820 RASL12Q9NYN1 266 aa4.59□□□□□ -1.67
HTT-202ENST00000502820 TAS2R3Q9NYW6 316 aa4.59□□□□□ -1.67
HTT-202ENST00000502820 PPP4R1LQ9P1A2 415 aa4.59□□□□□ -1.67
HTT-202ENST00000502820 KLHL9Q9P2J3 617 aa4.59□□□□□ -1.67
HTT-202ENST00000502820 MGAT4CQ9UBM8 478 aa4.59□□□□□ -1.67
HTT-202ENST00000502820 METTL1Q9UBP6 276 aaKnown RBP4.59□□□□□ -1.67
HTT-202ENST00000502820 VPS29Q9UBQ0 182 aa4.59□□□□□ -1.67
HTT-202ENST00000502820 UPB1Q9UBR1 384 aa4.59□□□□□ -1.67
HTT-202ENST00000502820 ZNF107Q9UII5 783 aaPredicted RBP4.59□□□□□ -1.67
HTT-202ENST00000502820 GDF2Q9UK05 429 aaPredicted RBP4.59□□□□□ -1.67
HTT-202ENST00000502820 MRPS33Q9Y291 106 aaKnown RBP4.59□□□□□ -1.67
HTT-202ENST00000502820 SLC9A8Q9Y2E8 581 aa4.59□□□□□ -1.67
HTT-202ENST00000502820 ATG4BQ9Y4P1 393 aa4.59□□□□□ -1.67
HTT-202ENST00000502820 ANK3Q12955 4377 aaKnown RBP4.59□□□□□ -1.68
HTT-202ENST00000502820 CPAMD8Q8IZJ3 1885 aa4.58□□□□□ -1.68
HTT-202ENST00000502820 IGHV4-30-2A0A087WSY4 118 aa4.58□□□□□ -1.68
HTT-202ENST00000502820 A0A0A6YYD5 115 aa4.58□□□□□ -1.68
HTT-202ENST00000502820 A0A0B4J203 849 aa4.58□□□□□ -1.68
HTT-202ENST00000502820 LOC100289279A0A1B0GTE1 492 aa4.58□□□□□ -1.68
HTT-202ENST00000502820 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP4.58□□□□□ -1.68
HTT-202ENST00000502820 LOC390937A0A1W2PQ73 354 aa4.58□□□□□ -1.68
HTT-202ENST00000502820 CDHR4A6H8M9 788 aa4.58□□□□□ -1.68
HTT-202ENST00000502820 SERINC4A6NH21 518 aa4.58□□□□□ -1.68
HTT-202ENST00000502820 ACOD1A6NK06 481 aa4.58□□□□□ -1.68
HTT-202ENST00000502820 DBX1A6NMT0 343 aa4.58□□□□□ -1.68
HTT-202ENST00000502820 C1orf196B1AJZ1 125 aa4.58□□□□□ -1.68
HTT-202ENST00000502820 ZNF879B4DU55 563 aa4.58□□□□□ -1.68
HTT-202ENST00000502820 G3V3Q6 166 aa4.58□□□□□ -1.68
HTT-202ENST00000502820 SMLR1H3BR10 107 aa4.58□□□□□ -1.68
HTT-202ENST00000502820 GTPBP1O00178 669 aaKnown RBP4.58□□□□□ -1.68
HTT-202ENST00000502820 FOXE1O00358 373 aaPredicted RBP4.58□□□□□ -1.68
HTT-202ENST00000502820 PLPP2O43688 288 aa4.58□□□□□ -1.68
HTT-202ENST00000502820 TMPRSS11DO60235 418 aa4.58□□□□□ -1.68
HTT-202ENST00000502820 FGF17O60258 216 aa4.58□□□□□ -1.68
HTT-202ENST00000502820 OR10H3O60404 316 aa4.58□□□□□ -1.68
HTT-202ENST00000502820 FZD7O75084 574 aa4.58□□□□□ -1.68
HTT-202ENST00000502820 NME6O75414 186 aaPredicted RBP4.58□□□□□ -1.68
HTT-202ENST00000502820 DIRAS1O95057 198 aa4.58□□□□□ -1.68
HTT-202ENST00000502820 ETHE1O95571 254 aa4.58□□□□□ -1.68
HTT-202ENST00000502820 PDYNP01213 254 aa4.58□□□□□ -1.68
HTT-202ENST00000502820 IFNGP01579 166 aa4.58□□□□□ -1.68
HTT-202ENST00000502820 MT-ND5P03915 603 aa4.58□□□□□ -1.68
HTT-202ENST00000502820 IGKV3-11P04433 115 aa4.58□□□□□ -1.68
HTT-202ENST00000502820 ALDOBP05062 364 aa4.58□□□□□ -1.68
HTT-202ENST00000502820 LPLP06858 475 aa4.58□□□□□ -1.68
HTT-202ENST00000502820 GKN3PP0CG01 181 aa4.58□□□□□ -1.68
HTT-202ENST00000502820 BTF3P20290 206 aaKnown RBP4.58□□□□□ -1.68
HTT-202ENST00000502820 CRYGSP22914 178 aa4.58□□□□□ -1.68
HTT-202ENST00000502820 HTR1FP30939 366 aa4.58□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms