RNA–Protein interactions for RNA: ENST00000498077.6

XRN1-214, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 5,600 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-214ENST00000498077 EXOSC7Q15024 291 aaKnown RBP1.23□□□□□ -2.21
XRN1-214ENST00000498077 TMEM249Q2WGJ8 235 aa1.23□□□□□ -2.21
XRN1-214ENST00000498077 TPTE2P1Q5T6R2 138 aa1.23□□□□□ -2.21
XRN1-214ENST00000498077 HES5Q5TA89 166 aa1.23□□□□□ -2.21
XRN1-214ENST00000498077 SUSD1Q6UWL2 747 aa1.23□□□□□ -2.21
XRN1-214ENST00000498077 C16orf89Q6UX73 402 aa1.23□□□□□ -2.21
XRN1-214ENST00000498077 GLDNQ6ZMI3 551 aaPredicted RBP1.23□□□□□ -2.21
XRN1-214ENST00000498077 PLA2G4DQ86XP0 818 aa1.23□□□□□ -2.21
XRN1-214ENST00000498077 TCAIMQ8N3R3 496 aa1.23□□□□□ -2.21
XRN1-214ENST00000498077 C10orf53Q8N6V4 93 aa1.23□□□□□ -2.21
XRN1-214ENST00000498077 Q8N7P7 452 aa1.23□□□□□ -2.21
XRN1-214ENST00000498077 ZIC4Q8N9L1 334 aa1.23□□□□□ -2.21
XRN1-214ENST00000498077 BPIFCQ8NFQ6 507 aa1.23□□□□□ -2.21
XRN1-214ENST00000498077 SCFD1Q8WVM8 642 aa1.23□□□□□ -2.21
XRN1-214ENST00000498077 TLCD1Q96CP7 247 aa1.23□□□□□ -2.21
XRN1-214ENST00000498077 CMTM7Q96FZ5 175 aa1.23□□□□□ -2.21
XRN1-214ENST00000498077 FAM71F1Q96KD3 344 aaPredicted RBP1.23□□□□□ -2.21
XRN1-214ENST00000498077 MRGPRX4Q96LA9 322 aa1.23□□□□□ -2.21
XRN1-214ENST00000498077 CCDC115Q96NT0 180 aa1.23□□□□□ -2.21
XRN1-214ENST00000498077 SLF1Q9BQI6 1058 aa1.23□□□□□ -2.21
XRN1-214ENST00000498077 CCM2Q9BSQ5 444 aa1.23□□□□□ -2.21
XRN1-214ENST00000498077 SPATC1LQ9H0A9 340 aa1.23□□□□□ -2.21
XRN1-214ENST00000498077 DNTTIP1Q9H147 329 aa1.23□□□□□ -2.21
XRN1-214ENST00000498077 DUSP21Q9H596 190 aa1.23□□□□□ -2.21
XRN1-214ENST00000498077 WASH6PQ9NQA3 447 aa1.23□□□□□ -2.21
XRN1-214ENST00000498077 DAZ3Q9NR90 486 aaKnown RBP1.23□□□□□ -2.21
XRN1-214ENST00000498077 CTPS2Q9NRF8 586 aa1.23□□□□□ -2.21
XRN1-214ENST00000498077 RCL1Q9Y2P8 373 aaKnown RBP1.23□□□□□ -2.21
XRN1-214ENST00000498077 GREB1Q4ZG55 1949 aa1.23□□□□□ -2.21
XRN1-214ENST00000498077 TRAV12-2A0A075B6T6 113 aa1.23□□□□□ -2.21
XRN1-214ENST00000498077 IGLV1-36A0A0B4J1U3 117 aa1.23□□□□□ -2.21
XRN1-214ENST00000498077 CCL15-CCL14A0A0B4J2E2 113 aa1.23□□□□□ -2.21
XRN1-214ENST00000498077 LOC102723532A0A0G2JNH3 316 aa1.23□□□□□ -2.21
XRN1-214ENST00000498077 CTXND1A0A1B0GTU2 59 aa1.23□□□□□ -2.21
XRN1-214ENST00000498077 TMEM238C9JI98 176 aa1.23□□□□□ -2.21
XRN1-214ENST00000498077 ADM5C9JUS6 153 aa1.23□□□□□ -2.21
XRN1-214ENST00000498077 BOLA2-SMG1P6H3BVE0 249 aa1.23□□□□□ -2.21
XRN1-214ENST00000498077 PSMD11O00231 422 aa1.23□□□□□ -2.21
XRN1-214ENST00000498077 MAPK13O15264 365 aa1.23□□□□□ -2.21
XRN1-214ENST00000498077 GSTZ1O43708 216 aaPredicted RBP1.23□□□□□ -2.21
XRN1-214ENST00000498077 SLC16A7O60669 478 aa1.23□□□□□ -2.21
XRN1-214ENST00000498077 GGCTO75223 188 aaKnown RBP1.23□□□□□ -2.21
XRN1-214ENST00000498077 HSBP1O75506 76 aa1.23□□□□□ -2.21
XRN1-214ENST00000498077 ECI2O75521 394 aa1.23□□□□□ -2.21
XRN1-214ENST00000498077 DIRAS1O95057 198 aa1.23□□□□□ -2.21
XRN1-214ENST00000498077 NADKO95544 446 aaPredicted RBP1.23□□□□□ -2.21
XRN1-214ENST00000498077 SLC16A8O95907 504 aa1.23□□□□□ -2.21
XRN1-214ENST00000498077 HPRT1P00492 218 aa1.23□□□□□ -2.21
XRN1-214ENST00000498077 SCG5P05408 212 aa1.23□□□□□ -2.21
XRN1-214ENST00000498077 ANKRD34CP0C6C1 535 aa1.23□□□□□ -2.21
XRN1-214ENST00000498077 CT45A10P0DMU9 189 aa1.23□□□□□ -2.21
XRN1-214ENST00000498077 JUPP14923 745 aa1.23□□□□□ -2.21
XRN1-214ENST00000498077 HOXB6P17509 224 aaKnown RBP1.23□□□□□ -2.21
XRN1-214ENST00000498077 PSMB1P20618 241 aaKnown RBP1.23□□□□□ -2.21
XRN1-214ENST00000498077 HRH2P25021 359 aa1.23□□□□□ -2.21
XRN1-214ENST00000498077 HNRNPH3P31942 346 aaKnown RBP1.23□□□□□ -2.21
XRN1-214ENST00000498077 OR1G1P47890 313 aa1.23□□□□□ -2.21
XRN1-214ENST00000498077 RFX3P48380 749 aa1.23□□□□□ -2.21
XRN1-214ENST00000498077 SERPINB10P48595 397 aa1.23□□□□□ -2.21
XRN1-214ENST00000498077 ERFP50548 548 aa1.23□□□□□ -2.21
XRN1-214ENST00000498077 PAFAH1B2P68402 229 aa1.23□□□□□ -2.21
XRN1-214ENST00000498077 ACVR1Q04771 509 aa1.23□□□□□ -2.21
XRN1-214ENST00000498077 PRSS8Q16651 343 aa1.23□□□□□ -2.21
XRN1-214ENST00000498077 CCL15Q16663 113 aa1.23□□□□□ -2.21
XRN1-214ENST00000498077 KBTBD12Q3ZCT8 623 aa1.23□□□□□ -2.21
XRN1-214ENST00000498077 RNF212Q495C1 297 aa1.23□□□□□ -2.21
XRN1-214ENST00000498077 TFAP2DQ7Z6R9 452 aa1.23□□□□□ -2.21
XRN1-214ENST00000498077 SPATS2Q86XZ4 545 aaKnown RBP1.23□□□□□ -2.21
XRN1-214ENST00000498077 AQP12AQ8IXF9 295 aa1.23□□□□□ -2.21
XRN1-214ENST00000498077 ZCCHC24Q8N2G6 241 aaKnown RBP1.23□□□□□ -2.21
XRN1-214ENST00000498077 BPIFB2Q8N4F0 458 aa1.23□□□□□ -2.21
XRN1-214ENST00000498077 DCBLD1Q8N8Z6 715 aa1.23□□□□□ -2.21
XRN1-214ENST00000498077 OR4M2Q8NGB6 313 aa1.23□□□□□ -2.21
XRN1-214ENST00000498077 OR52K1Q8NGK4 314 aa1.23□□□□□ -2.21
XRN1-214ENST00000498077 IL17DQ8TAD2 202 aa1.23□□□□□ -2.21
XRN1-214ENST00000498077 ZNF480Q8WV37 535 aa1.23□□□□□ -2.21
XRN1-214ENST00000498077 TMEM45BQ96B21 275 aa1.23□□□□□ -2.21
XRN1-214ENST00000498077 ZBTB10Q96DT7 871 aa1.23□□□□□ -2.21
XRN1-214ENST00000498077 CNRIP1Q96F85 164 aaPredicted RBP1.23□□□□□ -2.21
XRN1-214ENST00000498077 TPD52L3Q96J77 140 aa1.23□□□□□ -2.21
XRN1-214ENST00000498077 VPS25Q9BRG1 176 aa1.23□□□□□ -2.21
XRN1-214ENST00000498077 VAMP8Q9BV40 100 aa1.23□□□□□ -2.21
XRN1-214ENST00000498077 FTHL17Q9BXU8 183 aa1.23□□□□□ -2.21
XRN1-214ENST00000498077 POMKQ9H5K3 350 aa1.23□□□□□ -2.21
XRN1-214ENST00000498077 FAM120CQ9NX05 1096 aaKnown RBP1.23□□□□□ -2.21
XRN1-214ENST00000498077 GNPTGQ9UJJ9 305 aa1.23□□□□□ -2.21
XRN1-214ENST00000498077 STAP1Q9ULZ2 295 aa1.23□□□□□ -2.21
XRN1-214ENST00000498077 MRPS23Q9Y3D9 190 aaKnown RBP1.23□□□□□ -2.21
XRN1-214ENST00000498077 CFAP65Q6ZU64 1925 aaKnown RBP1.23□□□□□ -2.21
XRN1-214ENST00000498077 COL1A2P08123 1366 aa1.23□□□□□ -2.21
XRN1-214ENST00000498077 MUC3AQ02505 3323 aa1.23□□□□□ -2.21
XRN1-214ENST00000498077 CHD9Q3L8U1 2897 aa1.23□□□□□ -2.21
XRN1-214ENST00000498077 OR5H15A6NDH6 313 aa1.23□□□□□ -2.21
XRN1-214ENST00000498077 TMEM247A6NEH6 219 aa1.23□□□□□ -2.21
XRN1-214ENST00000498077 OR5H14A6NHG9 310 aa1.23□□□□□ -2.21
XRN1-214ENST00000498077 OR5H1A6NKK0 313 aa1.23□□□□□ -2.21
XRN1-214ENST00000498077 FAM183AA6NL82 134 aa1.23□□□□□ -2.21
XRN1-214ENST00000498077 A8MWP6 167 aa1.23□□□□□ -2.21
XRN1-214ENST00000498077 H0YCG3 227 aa1.23□□□□□ -2.21
XRN1-214ENST00000498077 H3BML4 177 aa1.23□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms