RNA–Protein interactions for RNA: ENST00000497544.2

CTSD-206, Transcript of cathepsin D, humanhuman

TSL 2

Gene CTSD, Length 783 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-206ENST00000497544 MNTQ99583 582 aa17.36■□□□□ 0.37
CTSD-206ENST00000497544 ABHD6Q9BV23 337 aa17.36■□□□□ 0.37
CTSD-206ENST00000497544 PCDHGB1Q9Y5G3 927 aa17.36■□□□□ 0.37
CTSD-206ENST00000497544 FAM221AA4D161 298 aa17.35■□□□□ 0.37
CTSD-206ENST00000497544 ZNF670-ZNF695F2Z2N8 137 aa17.35■□□□□ 0.37
CTSD-206ENST00000497544 APOL3O95236 402 aa17.35■□□□□ 0.37
CTSD-206ENST00000497544 CCL2P13500 99 aa17.35■□□□□ 0.37
CTSD-206ENST00000497544 TLE4Q04727 773 aa17.35■□□□□ 0.37
CTSD-206ENST00000497544 ZNF91Q05481 1191 aa17.35■□□□□ 0.37
CTSD-206ENST00000497544 ECH1Q13011 328 aa17.35■□□□□ 0.37
CTSD-206ENST00000497544 SMN1Q16637 294 aaKnown RBP17.35■□□□□ 0.37
CTSD-206ENST00000497544 KLHL22Q53GT1 634 aa17.35■□□□□ 0.37
CTSD-206ENST00000497544 OR4F15Q8NGB8 312 aa17.35■□□□□ 0.37
CTSD-206ENST00000497544 FBLIM1Q8WUP2 373 aa17.35■□□□□ 0.37
CTSD-206ENST00000497544 POM121L2Q96KW2 1035 aa17.35■□□□□ 0.37
CTSD-206ENST00000497544 COQ7Q99807 217 aa17.35■□□□□ 0.37
CTSD-206ENST00000497544 ATF6BQ99941 703 aa17.35■□□□□ 0.37
CTSD-206ENST00000497544 RNF115Q9Y4L5 304 aa17.35■□□□□ 0.37
CTSD-206ENST00000497544 LOC100509620A0A075B734 347 aa17.34■□□□□ 0.37
CTSD-206ENST00000497544 IGHV2OR16-5A0A0B4J2B6 119 aa17.34■□□□□ 0.37
CTSD-206ENST00000497544 C5orf49A4QMS7 147 aa17.34■□□□□ 0.37
CTSD-206ENST00000497544 OR6C6A6NF89 314 aa17.34■□□□□ 0.37
CTSD-206ENST00000497544 PHYHO14832 338 aa17.34■□□□□ 0.37
CTSD-206ENST00000497544 OR2T7P0C7T2 308 aa17.34■□□□□ 0.37
CTSD-206ENST00000497544 ALOX5APP20292 161 aa17.34■□□□□ 0.37
CTSD-206ENST00000497544 SLC15A1P46059 708 aa17.34■□□□□ 0.37
CTSD-206ENST00000497544 GALK2Q01415 458 aa17.34■□□□□ 0.37
CTSD-206ENST00000497544 KRT80Q6KB66 452 aa17.34■□□□□ 0.37
CTSD-206ENST00000497544 CSPG4Q6UVK1 2322 aa17.34■□□□□ 0.37
CTSD-206ENST00000497544 SPATC1Q76KD6 591 aa17.34■□□□□ 0.37
CTSD-206ENST00000497544 HIST2H2ABQ8IUE6 130 aaPredicted RBP17.34■□□□□ 0.37
CTSD-206ENST00000497544 OR10H4Q8NGA5 316 aa17.34■□□□□ 0.37
CTSD-206ENST00000497544 OR2T27Q8NH04 317 aa17.34■□□□□ 0.37
CTSD-206ENST00000497544 ST7LQ8TDW4 575 aa17.34■□□□□ 0.37
CTSD-206ENST00000497544 ASB17Q8WXJ9 295 aa17.34■□□□□ 0.37
CTSD-206ENST00000497544 LGALS12Q96DT0 336 aa17.34■□□□□ 0.37
CTSD-206ENST00000497544 TBX5Q99593 518 aa17.34■□□□□ 0.37
CTSD-206ENST00000497544 EIF3KQ9UBQ5 218 aaKnown RBP17.34■□□□□ 0.37
CTSD-206ENST00000497544 ATPIF1Q9UII2 106 aa17.34■□□□□ 0.37
CTSD-206ENST00000497544 POU2F3Q9UKI9 436 aa17.34■□□□□ 0.37
CTSD-206ENST00000497544 EXOGQ9Y2C4 368 aaKnown RBP17.34■□□□□ 0.37
CTSD-206ENST00000497544 SPEF1Q9Y4P9 236 aa17.34■□□□□ 0.37
CTSD-206ENST00000497544 ATP23Q9Y6H3 246 aa17.34■□□□□ 0.37
CTSD-206ENST00000497544 ZNF878C9JN71 531 aa17.33■□□□□ 0.36
CTSD-206ENST00000497544 CTAG2O75638 210 aa17.33■□□□□ 0.36
CTSD-206ENST00000497544 FADS2O95864 444 aaKnown RBP17.33■□□□□ 0.36
CTSD-206ENST00000497544 ZNF35P13682 527 aa17.33■□□□□ 0.36
CTSD-206ENST00000497544 LOXP28300 417 aaPredicted RBP17.33■□□□□ 0.36
CTSD-206ENST00000497544 CALCRP30988 508 aa17.33■□□□□ 0.36
CTSD-206ENST00000497544 CSNK2BP67870 215 aa17.33■□□□□ 0.36
CTSD-206ENST00000497544 RAB40BQ12829 278 aa17.33■□□□□ 0.36
CTSD-206ENST00000497544 ADAM5Q6NVV9 412 aa17.33■□□□□ 0.36
CTSD-206ENST00000497544 KCTD18Q6PI47 426 aaPredicted RBP17.33■□□□□ 0.36
CTSD-206ENST00000497544 TGIF2LYQ8IUE0 185 aa17.33■□□□□ 0.36
CTSD-206ENST00000497544 BPIFB6Q8NFQ5 453 aa17.33■□□□□ 0.36
CTSD-206ENST00000497544 OR10S1Q8NGN2 331 aa17.33■□□□□ 0.36
CTSD-206ENST00000497544 SLC7A6Q92536 515 aa17.33■□□□□ 0.36
CTSD-206ENST00000497544 SPTSSAQ969W0 71 aa17.33■□□□□ 0.36
CTSD-206ENST00000497544 HS3ST6Q96QI5 342 aa17.33■□□□□ 0.36
CTSD-206ENST00000497544 COPS4Q9BT78 406 aa17.33■□□□□ 0.36
CTSD-206ENST00000497544 PNRC2Q9NPJ4 139 aaKnown RBP17.33■□□□□ 0.36
CTSD-206ENST00000497544 MRPS18AQ9NVS2 196 aaKnown RBP17.33■□□□□ 0.36
CTSD-206ENST00000497544 COPS3Q9UNS2 423 aa17.33■□□□□ 0.36
CTSD-206ENST00000497544 GRIP1Q9Y3R0 1128 aa17.33■□□□□ 0.36
CTSD-206ENST00000497544 NSD1Q96L73 2696 aaPredicted RBP17.32■□□□□ 0.36
CTSD-206ENST00000497544 IRGMA1A4Y4 181 aa17.32■□□□□ 0.36
CTSD-206ENST00000497544 ATP6V1G2-DDX39BF2Z307 99 aa17.32■□□□□ 0.36
CTSD-206ENST00000497544 DENRO43583 198 aaKnown RBP17.32■□□□□ 0.36
CTSD-206ENST00000497544 FAM20BO75063 409 aa17.32■□□□□ 0.36
CTSD-206ENST00000497544 PLAUP00749 431 aa17.32■□□□□ 0.36
CTSD-206ENST00000497544 H2BFMP0C1H6 154 aa17.32■□□□□ 0.36
CTSD-206ENST00000497544 TPTEP56180 551 aa17.32■□□□□ 0.36
CTSD-206ENST00000497544 CXCR4P61073 352 aa17.32■□□□□ 0.36
CTSD-206ENST00000497544 GRB2P62993 217 aaKnown RBP17.32■□□□□ 0.36
CTSD-206ENST00000497544 SPOCK1Q08629 439 aa17.32■□□□□ 0.36
CTSD-206ENST00000497544 C6orf141Q5SZD1 244 aa17.32■□□□□ 0.36
CTSD-206ENST00000497544 ARL9Q6T311 187 aa17.32■□□□□ 0.36
CTSD-206ENST00000497544 ZNF704Q6ZNC4 412 aaPredicted RBP17.32■□□□□ 0.36
CTSD-206ENST00000497544 RHOUQ7L0Q8 258 aa17.32■□□□□ 0.36
CTSD-206ENST00000497544 KRT77Q7Z794 578 aa17.32■□□□□ 0.36
CTSD-206ENST00000497544 AMELYQ99218 206 aa17.32■□□□□ 0.36
CTSD-206ENST00000497544 TMEM204Q9BSN7 226 aa17.32■□□□□ 0.36
CTSD-206ENST00000497544 DDX28Q9NUL7 540 aaKnown RBP17.32■□□□□ 0.36
CTSD-206ENST00000497544 KLHDC2Q9Y2U9 406 aa17.32■□□□□ 0.36
CTSD-206ENST00000497544 F5H5K5 113 aa17.31■□□□□ 0.36
CTSD-206ENST00000497544 DBHP09172 617 aa17.31■□□□□ 0.36
CTSD-206ENST00000497544 HSD11B1P28845 292 aa17.31■□□□□ 0.36
CTSD-206ENST00000497544 RAD52P43351 418 aa17.31■□□□□ 0.36
CTSD-206ENST00000497544 ACTC1P68032 377 aa17.31■□□□□ 0.36
CTSD-206ENST00000497544 ACTA1P68133 377 aa17.31■□□□□ 0.36
CTSD-206ENST00000497544 ZNF322Q6U7Q0 402 aaPredicted RBP17.31■□□□□ 0.36
CTSD-206ENST00000497544 UNQ6126/PRO20091Q6UXV3 157 aa17.31■□□□□ 0.36
CTSD-206ENST00000497544 TMEM200AQ86VY9 491 aa17.31■□□□□ 0.36
CTSD-206ENST00000497544 ACBD7Q8N6N7 88 aa17.31■□□□□ 0.36
CTSD-206ENST00000497544 KBTBD8Q8NFY9 601 aa17.31■□□□□ 0.36
CTSD-206ENST00000497544 SPATA3Q8NHX4 192 aa17.31■□□□□ 0.36
CTSD-206ENST00000497544 RNF133Q8WVZ7 376 aa17.31■□□□□ 0.36
CTSD-206ENST00000497544 IPCEF1Q8WWN9 437 aaPredicted RBP17.31■□□□□ 0.36
CTSD-206ENST00000497544 C4orf45Q96LM5 186 aa17.31■□□□□ 0.36
CTSD-206ENST00000497544 DCLRE1CQ96SD1 692 aaKnown RBP17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms