RNA–Protein interactions for RNA: ENST00000497488.1

BRCA1-224, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-224ENST00000497488 ALOX12BO75342 701 aa4.91□□□□□ -1.62
BRCA1-224ENST00000497488 TRAPPC6AO75865 159 aa4.91□□□□□ -1.62
BRCA1-224ENST00000497488 PPP1R3DO95685 299 aa4.91□□□□□ -1.62
BRCA1-224ENST00000497488 PCCAP05165 728 aaPredicted RBP4.91□□□□□ -1.62
BRCA1-224ENST00000497488 PET100P0DJ07 73 aa4.91□□□□□ -1.62
BRCA1-224ENST00000497488 RBMY1CP0DJD4 496 aa4.91□□□□□ -1.62
BRCA1-224ENST00000497488 ZNF250P15622 560 aa4.91□□□□□ -1.62
BRCA1-224ENST00000497488 TBPP20226 339 aa4.91□□□□□ -1.62
BRCA1-224ENST00000497488 PSMB5P28074 263 aa4.91□□□□□ -1.62
BRCA1-224ENST00000497488 ALDH3B2P48448 385 aa4.91□□□□□ -1.62
BRCA1-224ENST00000497488 GSK3BP49841 420 aa4.91□□□□□ -1.62
BRCA1-224ENST00000497488 TAS2R60P59551 318 aa4.91□□□□□ -1.62
BRCA1-224ENST00000497488 SRSF4Q08170 494 aaKnown RBP4.91□□□□□ -1.62
BRCA1-224ENST00000497488 ECH1Q13011 328 aa4.91□□□□□ -1.62
BRCA1-224ENST00000497488 UNC119Q13432 240 aa4.91□□□□□ -1.62
BRCA1-224ENST00000497488 MED21Q13503 144 aa4.91□□□□□ -1.62
BRCA1-224ENST00000497488 KLF9Q13886 244 aaPredicted RBP4.91□□□□□ -1.62
BRCA1-224ENST00000497488 NSUN5P1Q3KNT7 163 aa4.91□□□□□ -1.62
BRCA1-224ENST00000497488 PARP15Q460N3 678 aa4.91□□□□□ -1.62
BRCA1-224ENST00000497488 ZNF425Q6IV72 752 aa4.91□□□□□ -1.62
BRCA1-224ENST00000497488 Q6ZRP5 223 aa4.91□□□□□ -1.62
BRCA1-224ENST00000497488 DUSP18Q8NEJ0 188 aa4.91□□□□□ -1.62
BRCA1-224ENST00000497488 OR51A7Q8NH64 312 aa4.91□□□□□ -1.62
BRCA1-224ENST00000497488 PHF10Q8WUB8 498 aaKnown RBP4.91□□□□□ -1.62
BRCA1-224ENST00000497488 RASL10AQ92737 203 aa4.91□□□□□ -1.62
BRCA1-224ENST00000497488 PSMG2Q969U7 264 aa4.91□□□□□ -1.62
BRCA1-224ENST00000497488 TSG101Q99816 390 aa4.91□□□□□ -1.62
BRCA1-224ENST00000497488 RSG1Q9BU20 258 aa4.91□□□□□ -1.62
BRCA1-224ENST00000497488 ACTR6Q9GZN1 396 aa4.91□□□□□ -1.62
BRCA1-224ENST00000497488 NMUR2Q9GZQ4 415 aa4.91□□□□□ -1.62
BRCA1-224ENST00000497488 SCAND2PQ9GZW5 306 aaPredicted RBP4.91□□□□□ -1.62
BRCA1-224ENST00000497488 ASB8Q9H765 288 aa4.91□□□□□ -1.62
BRCA1-224ENST00000497488 DDX31Q9H8H2 851 aaKnown RBP4.91□□□□□ -1.62
BRCA1-224ENST00000497488 FOLH1BQ9HBA9 442 aa4.91□□□□□ -1.62
BRCA1-224ENST00000497488 MRM3Q9HC36 420 aaKnown RBP4.91□□□□□ -1.62
BRCA1-224ENST00000497488 USE1Q9NZ43 259 aa4.91□□□□□ -1.62
BRCA1-224ENST00000497488 MUTYHQ9UIF7 546 aa4.91□□□□□ -1.62
BRCA1-224ENST00000497488 SPATA2Q9UM82 520 aa4.91□□□□□ -1.62
BRCA1-224ENST00000497488 LRRC37AA6NMS7 1700 aa4.91□□□□□ -1.62
BRCA1-224ENST00000497488 LTBP1Q14766 1721 aa4.9□□□□□ -1.62
BRCA1-224ENST00000497488 TRAV8-7A0A075B6U6 113 aa4.9□□□□□ -1.63
BRCA1-224ENST00000497488 ANKRD20A5PA0PJZ0 165 aa4.9□□□□□ -1.63
BRCA1-224ENST00000497488 GOLGA8JA6NMD2 632 aa4.9□□□□□ -1.63
BRCA1-224ENST00000497488 SEC14L6B5MCN3 397 aa4.9□□□□□ -1.63
BRCA1-224ENST00000497488 GOLGA8KD6RF30 607 aa4.9□□□□□ -1.63
BRCA1-224ENST00000497488 H0YHG0 523 aa4.9□□□□□ -1.63
BRCA1-224ENST00000497488 GOLGA8MH3BSY2 632 aa4.9□□□□□ -1.63
BRCA1-224ENST00000497488 K7ENP7 123 aa4.9□□□□□ -1.63
BRCA1-224ENST00000497488 SULT1C2O00338 296 aa4.9□□□□□ -1.63
BRCA1-224ENST00000497488 ERI3O43414 337 aaKnown RBP4.9□□□□□ -1.63
BRCA1-224ENST00000497488 AQP8O94778 261 aa4.9□□□□□ -1.63
BRCA1-224ENST00000497488 HCKP08631 526 aa4.9□□□□□ -1.63
BRCA1-224ENST00000497488 H2AFZP0C0S5 128 aa4.9□□□□□ -1.63
BRCA1-224ENST00000497488 GOLGA8HP0CJ92 632 aa4.9□□□□□ -1.63
BRCA1-224ENST00000497488 CT45A6P0DMU7 189 aa4.9□□□□□ -1.63
BRCA1-224ENST00000497488 CT45A5P0DMU8 189 aa4.9□□□□□ -1.63
BRCA1-224ENST00000497488 CT45A7P0DMV0 189 aa4.9□□□□□ -1.63
BRCA1-224ENST00000497488 MLNP12872 115 aa4.9□□□□□ -1.63
BRCA1-224ENST00000497488 GFAPP14136 432 aa4.9□□□□□ -1.63
BRCA1-224ENST00000497488 SHMT2P34897 504 aa4.9□□□□□ -1.63
BRCA1-224ENST00000497488 ACTR1BP42025 376 aa4.9□□□□□ -1.63
BRCA1-224ENST00000497488 TGM4P49221 684 aa4.9□□□□□ -1.63
BRCA1-224ENST00000497488 C1QTNF8P60827 252 aa4.9□□□□□ -1.63
BRCA1-224ENST00000497488 MAGOHP61326 146 aaKnown RBP4.9□□□□□ -1.63
BRCA1-224ENST00000497488 VBP1P61758 197 aa4.9□□□□□ -1.63
BRCA1-224ENST00000497488 LMO4P61968 165 aa4.9□□□□□ -1.63
BRCA1-224ENST00000497488 SRPXP78539 464 aa4.9□□□□□ -1.63
BRCA1-224ENST00000497488 DR1Q01658 176 aa4.9□□□□□ -1.63
BRCA1-224ENST00000497488 IFFO1Q0D2I5 559 aa4.9□□□□□ -1.63
BRCA1-224ENST00000497488 SLC10A7Q0GE19 358 aa4.9□□□□□ -1.63
BRCA1-224ENST00000497488 BNIP2Q12982 314 aa4.9□□□□□ -1.63
BRCA1-224ENST00000497488 STX5Q13190 355 aa4.9□□□□□ -1.63
BRCA1-224ENST00000497488 UAP1Q16222 522 aaPredicted RBP4.9□□□□□ -1.63
BRCA1-224ENST00000497488 CT45A1Q5HYN5 189 aa4.9□□□□□ -1.63
BRCA1-224ENST00000497488 ACOT7LQ6ZUV0 252 aa4.9□□□□□ -1.63
BRCA1-224ENST00000497488 COX15Q7KZN9 410 aa4.9□□□□□ -1.63
BRCA1-224ENST00000497488 GDPD3Q7L5L3 318 aa4.9□□□□□ -1.63
BRCA1-224ENST00000497488 SSX7Q7RTT5 188 aa4.9□□□□□ -1.63
BRCA1-224ENST00000497488 FTMTQ8N4E7 242 aa4.9□□□□□ -1.63
BRCA1-224ENST00000497488 HSD17B11Q8NBQ5 300 aa4.9□□□□□ -1.63
BRCA1-224ENST00000497488 OR2L2Q8NH16 312 aa4.9□□□□□ -1.63
BRCA1-224ENST00000497488 CT45A3Q8NHU0 189 aa4.9□□□□□ -1.63
BRCA1-224ENST00000497488 C11orf45Q8TAV5 145 aa4.9□□□□□ -1.63
BRCA1-224ENST00000497488 TFB1MQ8WVM0 346 aaKnown RBP4.9□□□□□ -1.63
BRCA1-224ENST00000497488 CPNE4Q96A23 557 aaPredicted RBP4.9□□□□□ -1.63
BRCA1-224ENST00000497488 RARRES2Q99969 163 aa4.9□□□□□ -1.63
BRCA1-224ENST00000497488 KLHDC3Q9BQ90 382 aa4.9□□□□□ -1.63
BRCA1-224ENST00000497488 ISYNA1Q9NPH2 558 aa4.9□□□□□ -1.63
BRCA1-224ENST00000497488 RHBDL2Q9NX52 303 aa4.9□□□□□ -1.63
BRCA1-224ENST00000497488 SLC25A37Q9NYZ2 338 aa4.9□□□□□ -1.63
BRCA1-224ENST00000497488 PLLPQ9Y342 182 aa4.9□□□□□ -1.63
BRCA1-224ENST00000497488 AUP1Q9Y679 476 aa4.9□□□□□ -1.63
BRCA1-224ENST00000497488 COX11Q9Y6N1 276 aa4.9□□□□□ -1.63
BRCA1-224ENST00000497488 EVPLQ92817 2033 aa4.89□□□□□ -1.63
BRCA1-224ENST00000497488 IGKV1D-8A0A087WSZ0 117 aa4.89□□□□□ -1.63
BRCA1-224ENST00000497488 A0A1B0GU03 582 aa4.89□□□□□ -1.63
BRCA1-224ENST00000497488 DNAJC9-AS1A6NH13 148 aa4.89□□□□□ -1.63
BRCA1-224ENST00000497488 OR6C70A6NIJ9 312 aa4.89□□□□□ -1.63
BRCA1-224ENST00000497488 SMKR1H3BMG3 65 aa4.89□□□□□ -1.63
BRCA1-224ENST00000497488 MGRN1O60291 552 aa4.89□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms