RNA–Protein interactions for RNA: ENST00000497470.1

SCAMP3-209, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 5

Gene SCAMP3, Length 845 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-209ENST00000497470 GRNP28799 593 aaKnown RBP17.14■□□□□ 0.33
SCAMP3-209ENST00000497470 GDI2P50395 445 aaKnown RBP17.14■□□□□ 0.33
SCAMP3-209ENST00000497470 MMP16P51512 607 aa17.14■□□□□ 0.33
SCAMP3-209ENST00000497470 PIGFQ07326 219 aa17.14■□□□□ 0.33
SCAMP3-209ENST00000497470 RAB39AQ14964 217 aa17.14■□□□□ 0.33
SCAMP3-209ENST00000497470 ZNF774Q6NX45 483 aa17.14■□□□□ 0.33
SCAMP3-209ENST00000497470 FDX2Q6P4F2 183 aa17.14■□□□□ 0.33
SCAMP3-209ENST00000497470 COLCA1Q6ZS62 124 aa17.14■□□□□ 0.33
SCAMP3-209ENST00000497470 C22orf34Q6ZV56 151 aa17.14■□□□□ 0.33
SCAMP3-209ENST00000497470 SLC30A7Q8NEW0 376 aa17.14■□□□□ 0.33
SCAMP3-209ENST00000497470 TBCCD1Q9NVR7 557 aa17.14■□□□□ 0.33
SCAMP3-209ENST00000497470 ERGIC3Q9Y282 383 aa17.14■□□□□ 0.33
SCAMP3-209ENST00000497470 ANKHD1Q8IWZ3 2542 aaKnown RBP17.13■□□□□ 0.33
SCAMP3-209ENST00000497470 IGHV1-18A0A0C4DH31 117 aa17.13■□□□□ 0.33
SCAMP3-209ENST00000497470 ABHD16AO95870 558 aa17.13■□□□□ 0.33
SCAMP3-209ENST00000497470 H2BFMP0C1H6 154 aa17.13■□□□□ 0.33
SCAMP3-209ENST00000497470 CECR9P0C854 216 aa17.13■□□□□ 0.33
SCAMP3-209ENST00000497470 PATE4P0C8F1 98 aa17.13■□□□□ 0.33
SCAMP3-209ENST00000497470 RNF224P0DH78 156 aa17.13■□□□□ 0.33
SCAMP3-209ENST00000497470 RPS27P42677 84 aaKnown RBP17.13■□□□□ 0.33
SCAMP3-209ENST00000497470 HTR5AP47898 357 aa17.13■□□□□ 0.33
SCAMP3-209ENST00000497470 RIDAP52758 137 aaKnown RBP17.13■□□□□ 0.33
SCAMP3-209ENST00000497470 TPTEP56180 551 aa17.13■□□□□ 0.33
SCAMP3-209ENST00000497470 MVKQ03426 396 aa17.13■□□□□ 0.33
SCAMP3-209ENST00000497470 ACSM1Q08AH1 577 aa17.13■□□□□ 0.33
SCAMP3-209ENST00000497470 RSPO1Q2MKA7 263 aaPredicted RBP17.13■□□□□ 0.33
SCAMP3-209ENST00000497470 NCMAPQ5T1S8 102 aa17.13■□□□□ 0.33
SCAMP3-209ENST00000497470 KRT77Q7Z794 578 aa17.13■□□□□ 0.33
SCAMP3-209ENST00000497470 ZSCAN2Q7Z7L9 614 aaPredicted RBP17.13■□□□□ 0.33
SCAMP3-209ENST00000497470 HIST2H2ABQ8IUE6 130 aaPredicted RBP17.13■□□□□ 0.33
SCAMP3-209ENST00000497470 SNX33Q8WV41 574 aa17.13■□□□□ 0.33
SCAMP3-209ENST00000497470 ALG8Q9BVK2 526 aa17.13■□□□□ 0.33
SCAMP3-209ENST00000497470 PAK1IP1Q9NWT1 392 aaPredicted RBP17.13■□□□□ 0.33
SCAMP3-209ENST00000497470 NPAP1Q9NZP6 1156 aa17.13■□□□□ 0.33
SCAMP3-209ENST00000497470 KLHDC2Q9Y2U9 406 aa17.13■□□□□ 0.33
SCAMP3-209ENST00000497470 PYCARD-AS1I3L0S3 204 aa17.12■□□□□ 0.33
SCAMP3-209ENST00000497470 CRYAAP02489 173 aa17.12■□□□□ 0.33
SCAMP3-209ENST00000497470 CD40P25942 277 aa17.12■□□□□ 0.33
SCAMP3-209ENST00000497470 C21orf33P30042 268 aaPredicted RBP17.12■□□□□ 0.33
SCAMP3-209ENST00000497470 IDH3GP51553 393 aaPredicted RBP17.12■□□□□ 0.33
SCAMP3-209ENST00000497470 NAAAQ02083 359 aa17.12■□□□□ 0.33
SCAMP3-209ENST00000497470 BDH1Q02338 343 aa17.12■□□□□ 0.33
SCAMP3-209ENST00000497470 TBCEQ15813 527 aaPredicted RBP17.12■□□□□ 0.33
SCAMP3-209ENST00000497470 ZNF829Q3KNS6 432 aaPredicted RBP17.12■□□□□ 0.33
SCAMP3-209ENST00000497470 CCDC58Q4VC31 144 aa17.12■□□□□ 0.33
SCAMP3-209ENST00000497470 KLHL36Q8N4N3 616 aa17.12■□□□□ 0.33
SCAMP3-209ENST00000497470 SVOPQ8N4V2 548 aa17.12■□□□□ 0.33
SCAMP3-209ENST00000497470 NANOGP1Q8N7R0 232 aa17.12■□□□□ 0.33
SCAMP3-209ENST00000497470 ZNF485Q8NCK3 441 aa17.12■□□□□ 0.33
SCAMP3-209ENST00000497470 AKR7LQ8NHP1 331 aa17.12■□□□□ 0.33
SCAMP3-209ENST00000497470 AMELYQ99218 206 aa17.12■□□□□ 0.33
SCAMP3-209ENST00000497470 MOB1AQ9H8S9 216 aa17.12■□□□□ 0.33
SCAMP3-209ENST00000497470 ELOVL3Q9HB03 270 aa17.12■□□□□ 0.33
SCAMP3-209ENST00000497470 ISYNA1Q9NPH2 558 aa17.12■□□□□ 0.33
SCAMP3-209ENST00000497470 MRM2Q9UI43 246 aaKnown RBP17.12■□□□□ 0.33
SCAMP3-209ENST00000497470 ZNF391Q9UJN7 358 aa17.12■□□□□ 0.33
SCAMP3-209ENST00000497470 SPEF1Q9Y4P9 236 aa17.12■□□□□ 0.33
SCAMP3-209ENST00000497470 RELNP78509 3460 aa17.12■□□□□ 0.33
SCAMP3-209ENST00000497470 LOC100509620A0A075B734 347 aa17.11■□□□□ 0.33
SCAMP3-209ENST00000497470 TRIM64CA6NLI5 447 aa17.11■□□□□ 0.33
SCAMP3-209ENST00000497470 PRSS44E7EML9 344 aa17.11■□□□□ 0.33
SCAMP3-209ENST00000497470 H3BSA7 217 aa17.11■□□□□ 0.33
SCAMP3-209ENST00000497470 MT-ND5P03915 603 aa17.11■□□□□ 0.33
SCAMP3-209ENST00000497470 EEF1B2P24534 225 aaKnown RBP17.11■□□□□ 0.33
SCAMP3-209ENST00000497470 APEX1P27695 318 aaKnown RBP17.11■□□□□ 0.33
SCAMP3-209ENST00000497470 TGM4P49221 684 aa17.11■□□□□ 0.33
SCAMP3-209ENST00000497470 HCCSP53701 268 aa17.11■□□□□ 0.33
SCAMP3-209ENST00000497470 PSMA6P60900 246 aaKnown RBP17.11■□□□□ 0.33
SCAMP3-209ENST00000497470 TUBA1BP68363 451 aa17.11■□□□□ 0.33
SCAMP3-209ENST00000497470 TUBA4AP68366 448 aa17.11■□□□□ 0.33
SCAMP3-209ENST00000497470 TAF13Q15543 124 aa17.11■□□□□ 0.33
SCAMP3-209ENST00000497470 ZNF544Q6NX49 715 aa17.11■□□□□ 0.33
SCAMP3-209ENST00000497470 TUBA1AQ71U36 451 aa17.11■□□□□ 0.33
SCAMP3-209ENST00000497470 FAM220AQ7Z4H9 259 aa17.11■□□□□ 0.33
SCAMP3-209ENST00000497470 OR52H1Q8NGJ2 320 aa17.11■□□□□ 0.33
SCAMP3-209ENST00000497470 LINC01560Q8TB33 94 aa17.11■□□□□ 0.33
SCAMP3-209ENST00000497470 PSMG3-AS1Q96PY0 264 aa17.11■□□□□ 0.33
SCAMP3-209ENST00000497470 RHNO1Q9BSD3 238 aa17.11■□□□□ 0.33
SCAMP3-209ENST00000497470 TMEM204Q9BSN7 226 aa17.11■□□□□ 0.33
SCAMP3-209ENST00000497470 MND1Q9BWT6 205 aa17.11■□□□□ 0.33
SCAMP3-209ENST00000497470 C1QTNF5Q9BXJ0 243 aa17.11■□□□□ 0.33
SCAMP3-209ENST00000497470 BCL2L14Q9BZR8 327 aa17.11■□□□□ 0.33
SCAMP3-209ENST00000497470 CENPMQ9NSP4 180 aa17.11■□□□□ 0.33
SCAMP3-209ENST00000497470 SLCO1C1Q9NYB5 712 aa17.11■□□□□ 0.33
SCAMP3-209ENST00000497470 EIF3KQ9UBQ5 218 aaKnown RBP17.11■□□□□ 0.33
SCAMP3-209ENST00000497470 LRP12Q9Y561 859 aa17.11■□□□□ 0.33
SCAMP3-209ENST00000497470 IGHV2OR16-5A0A0B4J2B6 119 aa17.1■□□□□ 0.33
SCAMP3-209ENST00000497470 A0A1W2PR80 420 aa17.1■□□□□ 0.33
SCAMP3-209ENST00000497470 FAM221AA4D161 298 aa17.1■□□□□ 0.33
SCAMP3-209ENST00000497470 C19orf84I3L1E1 186 aa17.1■□□□□ 0.33
SCAMP3-209ENST00000497470 M0R135 149 aa17.1■□□□□ 0.33
SCAMP3-209ENST00000497470 APOL3O95236 402 aa17.1■□□□□ 0.33
SCAMP3-209ENST00000497470 CD1AP06126 327 aa17.1■□□□□ 0.33
SCAMP3-209ENST00000497470 ACSM4P0C7M7 580 aa17.1■□□□□ 0.33
SCAMP3-209ENST00000497470 HSD11B1P28845 292 aa17.1■□□□□ 0.33
SCAMP3-209ENST00000497470 RAD52P43351 418 aa17.1■□□□□ 0.33
SCAMP3-209ENST00000497470 ETV1P50549 477 aa17.1■□□□□ 0.33
SCAMP3-209ENST00000497470 CCR9P51686 369 aa17.1■□□□□ 0.33
SCAMP3-209ENST00000497470 WNT4P56705 351 aa17.1■□□□□ 0.33
SCAMP3-209ENST00000497470 TAS2R43P59537 309 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms