RNA–Protein interactions for RNA: ENST00000496462.1

U2AF1-212, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best)

Gene U2AF1, Length 3,973 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-212ENST00000496462 PLA2G12AQ9BZM1 189 aa7.56□□□□□ -1.2
U2AF1-212ENST00000496462 FAM192AQ9GZU8 254 aa7.56□□□□□ -1.2
U2AF1-212ENST00000496462 TENM4Q6N022 2769 aa7.56□□□□□ -1.2
U2AF1-212ENST00000496462 MAGEA13PA6NCF6 341 aa7.56□□□□□ -1.2
U2AF1-212ENST00000496462 OR6C68A6NDL8 312 aa7.56□□□□□ -1.2
U2AF1-212ENST00000496462 KLF4O43474 513 aa7.56□□□□□ -1.2
U2AF1-212ENST00000496462 PRKYO43930 277 aa7.56□□□□□ -1.2
U2AF1-212ENST00000496462 RAMP1O60894 148 aa7.56□□□□□ -1.2
U2AF1-212ENST00000496462 TTKP33981 857 aa7.56□□□□□ -1.2
U2AF1-212ENST00000496462 SRP9P49458 86 aaKnown RBP7.56□□□□□ -1.2
U2AF1-212ENST00000496462 CHN2P52757 468 aa7.56□□□□□ -1.2
U2AF1-212ENST00000496462 C3orf36Q3SXR2 165 aa7.56□□□□□ -1.2
U2AF1-212ENST00000496462 ZNF770Q6IQ21 691 aaPredicted RBP7.56□□□□□ -1.2
U2AF1-212ENST00000496462 FAM57BQ71RH2 274 aa7.56□□□□□ -1.2
U2AF1-212ENST00000496462 ZNF679Q8IYX0 411 aa7.56□□□□□ -1.2
U2AF1-212ENST00000496462 GABRG1Q8N1C3 465 aa7.56□□□□□ -1.2
U2AF1-212ENST00000496462 MS4A15Q8N5U1 240 aa7.56□□□□□ -1.2
U2AF1-212ENST00000496462 ZSCAN4Q8NAM6 433 aaPredicted RBP7.56□□□□□ -1.2
U2AF1-212ENST00000496462 OR51B6Q9H340 312 aa7.56□□□□□ -1.2
U2AF1-212ENST00000496462 MED20Q9H944 212 aa7.56□□□□□ -1.2
U2AF1-212ENST00000496462 CISD1Q9NZ45 108 aaKnown RBP7.56□□□□□ -1.2
U2AF1-212ENST00000496462 CAB39Q9Y376 341 aaPredicted RBP7.56□□□□□ -1.2
U2AF1-212ENST00000496462 PKDREJQ9NTG1 2253 aa7.56□□□□□ -1.2
U2AF1-212ENST00000496462 H3BSA7 217 aa7.56□□□□□ -1.2
U2AF1-212ENST00000496462 TNFSF13O75888 250 aa7.56□□□□□ -1.2
U2AF1-212ENST00000496462 ARL6IP5O75915 188 aa7.56□□□□□ -1.2
U2AF1-212ENST00000496462 UBCP0CG48 685 aaKnown RBP7.56□□□□□ -1.2
U2AF1-212ENST00000496462 CRYGSP22914 178 aa7.56□□□□□ -1.2
U2AF1-212ENST00000496462 CX3CR1P49238 355 aa7.56□□□□□ -1.2
U2AF1-212ENST00000496462 ST3GAL4Q11206 333 aa7.56□□□□□ -1.2
U2AF1-212ENST00000496462 MEP1BQ16820 701 aa7.56□□□□□ -1.2
U2AF1-212ENST00000496462 ZIC4Q8N9L1 334 aa7.56□□□□□ -1.2
U2AF1-212ENST00000496462 OTOSQ8NHW6 89 aa7.56□□□□□ -1.2
U2AF1-212ENST00000496462 ALG8Q9BVK2 526 aa7.56□□□□□ -1.2
U2AF1-212ENST00000496462 PLEKHB1Q9UF11 243 aaPredicted RBP7.56□□□□□ -1.2
U2AF1-212ENST00000496462 HHLA2Q9UM44 414 aa7.56□□□□□ -1.2
U2AF1-212ENST00000496462 DHDHQ9UQ10 334 aa7.56□□□□□ -1.2
U2AF1-212ENST00000496462 A0A1W2PR80 420 aa7.55□□□□□ -1.2
U2AF1-212ENST00000496462 ZNF879B4DU55 563 aa7.55□□□□□ -1.2
U2AF1-212ENST00000496462 M0R233 179 aa7.55□□□□□ -1.2
U2AF1-212ENST00000496462 PDCD5O14737 125 aa7.55□□□□□ -1.2
U2AF1-212ENST00000496462 ADORA2A-AS1P86434 159 aa7.55□□□□□ -1.2
U2AF1-212ENST00000496462 ZNF91Q05481 1191 aa7.55□□□□□ -1.2
U2AF1-212ENST00000496462 RUNX1T1Q06455 604 aa7.55□□□□□ -1.2
U2AF1-212ENST00000496462 KCNJ8Q15842 424 aa7.55□□□□□ -1.2
U2AF1-212ENST00000496462 TEX30Q5JUR7 227 aa7.55□□□□□ -1.2
U2AF1-212ENST00000496462 PTP4A1Q93096 173 aa7.55□□□□□ -1.2
U2AF1-212ENST00000496462 C4orf45Q96LM5 186 aa7.55□□□□□ -1.2
U2AF1-212ENST00000496462 TSSK2Q96PF2 358 aa7.55□□□□□ -1.2
U2AF1-212ENST00000496462 HAO2Q9NYQ3 351 aa7.55□□□□□ -1.2
U2AF1-212ENST00000496462 REV1Q9UBZ9 1251 aa7.55□□□□□ -1.2
U2AF1-212ENST00000496462 ENPP5Q9UJA9 477 aa7.55□□□□□ -1.2
U2AF1-212ENST00000496462 RELNP78509 3460 aa7.55□□□□□ -1.2
U2AF1-212ENST00000496462 B9A039 149 aa7.55□□□□□ -1.2
U2AF1-212ENST00000496462 MYF6P23409 242 aa7.55□□□□□ -1.2
U2AF1-212ENST00000496462 CD40P25942 277 aa7.55□□□□□ -1.2
U2AF1-212ENST00000496462 PPP1CBP62140 327 aa7.55□□□□□ -1.2
U2AF1-212ENST00000496462 TUBA1BP68363 451 aa7.55□□□□□ -1.2
U2AF1-212ENST00000496462 TUBA4AP68366 448 aa7.55□□□□□ -1.2
U2AF1-212ENST00000496462 MRPS15P82914 257 aaKnown RBP7.55□□□□□ -1.2
U2AF1-212ENST00000496462 TUBA1AQ71U36 451 aa7.55□□□□□ -1.2
U2AF1-212ENST00000496462 RHOUQ7L0Q8 258 aa7.55□□□□□ -1.2
U2AF1-212ENST00000496462 ZBTB46Q86UZ6 589 aa7.55□□□□□ -1.2
U2AF1-212ENST00000496462 OR6V1Q8N148 313 aa7.55□□□□□ -1.2
U2AF1-212ENST00000496462 ELL3Q9HB65 397 aaPredicted RBP7.55□□□□□ -1.2
U2AF1-212ENST00000496462 TCF7L1Q9HCS4 588 aa7.55□□□□□ -1.2
U2AF1-212ENST00000496462 PCDHB10Q9UN67 800 aa7.55□□□□□ -1.2
U2AF1-212ENST00000496462 SSR3Q9UNL2 185 aa7.55□□□□□ -1.2
U2AF1-212ENST00000496462 IFNL4K9M1U5 179 aa7.55□□□□□ -1.2
U2AF1-212ENST00000496462 GPRIN2O60269 458 aa7.55□□□□□ -1.2
U2AF1-212ENST00000496462 SMPD2O60906 423 aa7.55□□□□□ -1.2
U2AF1-212ENST00000496462 FAM157BP0CG42 384 aa7.55□□□□□ -1.2
U2AF1-212ENST00000496462 COX5AP20674 150 aa7.55□□□□□ -1.2
U2AF1-212ENST00000496462 APEX1P27695 318 aaKnown RBP7.55□□□□□ -1.2
U2AF1-212ENST00000496462 APOBEC3AP31941 199 aaPredicted RBP7.55□□□□□ -1.2
U2AF1-212ENST00000496462 GABARAPL2P60520 117 aa7.55□□□□□ -1.2
U2AF1-212ENST00000496462 RIPPLY1Q0D2K3 151 aa7.55□□□□□ -1.2
U2AF1-212ENST00000496462 KCNMB1Q16558 191 aa7.55□□□□□ -1.2
U2AF1-212ENST00000496462 ZNF774Q6NX45 483 aa7.55□□□□□ -1.2
U2AF1-212ENST00000496462 ZNF474Q6S9Z5 364 aaPredicted RBP7.55□□□□□ -1.2
U2AF1-212ENST00000496462 SLC26A10Q8NG04 563 aa7.55□□□□□ -1.2
U2AF1-212ENST00000496462 OR8D4Q8NGM9 314 aa7.55□□□□□ -1.2
U2AF1-212ENST00000496462 OR13G1Q8NGZ3 307 aa7.55□□□□□ -1.2
U2AF1-212ENST00000496462 MRPL13Q9BYD1 178 aaKnown RBP7.55□□□□□ -1.2
U2AF1-212ENST00000496462 CLEC4MQ9H2X3 399 aaPredicted RBP7.55□□□□□ -1.2
U2AF1-212ENST00000496462 TBCCD1Q9NVR7 557 aa7.55□□□□□ -1.2
U2AF1-212ENST00000496462 NKX1-2Q9UD57 310 aaPredicted RBP7.55□□□□□ -1.2
U2AF1-212ENST00000496462 LRRC42Q9Y546 428 aa7.55□□□□□ -1.2
U2AF1-212ENST00000496462 TRBV2A0A0J9YWF9 115 aa7.54□□□□□ -1.2
U2AF1-212ENST00000496462 hCG_1807616A0A1W2PRN6 198 aa7.54□□□□□ -1.2
U2AF1-212ENST00000496462 MEGF11A6BM72 1044 aa7.54□□□□□ -1.2
U2AF1-212ENST00000496462 SEMA7AO75326 666 aa7.54□□□□□ -1.2
U2AF1-212ENST00000496462 PRKACBP22694 351 aa7.54□□□□□ -1.2
U2AF1-212ENST00000496462 CAPZA1P52907 286 aa7.54□□□□□ -1.2
U2AF1-212ENST00000496462 CDK5R2Q13319 367 aa7.54□□□□□ -1.2
U2AF1-212ENST00000496462 PCGF3Q3KNV8 242 aa7.54□□□□□ -1.2
U2AF1-212ENST00000496462 DOK3Q7L591 496 aa7.54□□□□□ -1.2
U2AF1-212ENST00000496462 SKA3Q8IX90 412 aa7.54□□□□□ -1.2
U2AF1-212ENST00000496462 SYS1Q8N2H4 156 aa7.54□□□□□ -1.2
U2AF1-212ENST00000496462 LRRC75AQ8NAA5 344 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms