RNA–Protein interactions for RNA: ENST00000496445.5

VTI1A-209, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 853 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-209ENST00000496445 CRABP1P29762 137 aa12.05□□□□□ -0.48
VTI1A-209ENST00000496445 SMIM11AP58511 58 aa12.05□□□□□ -0.48
VTI1A-209ENST00000496445 SLC3A1Q07837 685 aa12.05□□□□□ -0.48
VTI1A-209ENST00000496445 COX10Q12887 443 aa12.05□□□□□ -0.48
VTI1A-209ENST00000496445 HLXQ14774 488 aaPredicted RBP12.05□□□□□ -0.48
VTI1A-209ENST00000496445 KRTAP27-1Q3LI81 207 aa12.05□□□□□ -0.48
VTI1A-209ENST00000496445 PGBD2Q6P3X8 592 aa12.05□□□□□ -0.48
VTI1A-209ENST00000496445 SHQ1Q6PI26 577 aaKnown RBP12.05□□□□□ -0.48
VTI1A-209ENST00000496445 DNM1P34Q6PK57 102 aa12.05□□□□□ -0.48
VTI1A-209ENST00000496445 CORO6Q6QEF8 472 aa12.05□□□□□ -0.48
VTI1A-209ENST00000496445 JAZF1Q86VZ6 243 aa12.05□□□□□ -0.48
VTI1A-209ENST00000496445 DEFB107AQ8IZN7 70 aa12.05□□□□□ -0.48
VTI1A-209ENST00000496445 OR5AS1Q8N127 324 aa12.05□□□□□ -0.48
VTI1A-209ENST00000496445 ZNF283Q8N7M2 679 aa12.05□□□□□ -0.48
VTI1A-209ENST00000496445 SLC26A10Q8NG04 563 aa12.05□□□□□ -0.48
VTI1A-209ENST00000496445 OR2Z1Q8NG97 314 aa12.05□□□□□ -0.48
VTI1A-209ENST00000496445 OR4M2Q8NGB6 313 aa12.05□□□□□ -0.48
VTI1A-209ENST00000496445 OR4K13Q8NH42 304 aa12.05□□□□□ -0.48
VTI1A-209ENST00000496445 ITLN1Q8WWA0 313 aa12.05□□□□□ -0.48
VTI1A-209ENST00000496445 MCUR1Q96AQ8 359 aa12.05□□□□□ -0.48
VTI1A-209ENST00000496445 HAVCR1Q96D42 359 aa12.05□□□□□ -0.48
VTI1A-209ENST00000496445 SIGLEC11Q96RL6 698 aa12.05□□□□□ -0.48
VTI1A-209ENST00000496445 DCLRE1CQ96SD1 692 aaKnown RBP12.05□□□□□ -0.48
VTI1A-209ENST00000496445 COQ7Q99807 217 aa12.05□□□□□ -0.48
VTI1A-209ENST00000496445 IFT27Q9BW83 186 aa12.05□□□□□ -0.48
VTI1A-209ENST00000496445 FN3KQ9H479 309 aa12.05□□□□□ -0.48
VTI1A-209ENST00000496445 IL1RAPQ9NPH3 570 aa12.05□□□□□ -0.48
VTI1A-209ENST00000496445 RPRD1BQ9NQG5 326 aaKnown RBP12.05□□□□□ -0.48
VTI1A-209ENST00000496445 TUBG2Q9NRH3 451 aa12.05□□□□□ -0.48
VTI1A-209ENST00000496445 TMEM106BQ9NUM4 274 aa12.05□□□□□ -0.48
VTI1A-209ENST00000496445 PTTG3PQ9NZH4 202 aa12.05□□□□□ -0.48
VTI1A-209ENST00000496445 ARL2BPQ9Y2Y0 163 aa12.05□□□□□ -0.48
VTI1A-209ENST00000496445 NPTNQ9Y639 398 aa12.05□□□□□ -0.48
VTI1A-209ENST00000496445 OR6C68A6NDL8 312 aa12.04□□□□□ -0.48
VTI1A-209ENST00000496445 RAC2P15153 192 aa12.04□□□□□ -0.48
VTI1A-209ENST00000496445 ADRA2CP18825 462 aa12.04□□□□□ -0.48
VTI1A-209ENST00000496445 CENPAP49450 140 aa12.04□□□□□ -0.48
VTI1A-209ENST00000496445 RGS6P49758 472 aa12.04□□□□□ -0.48
VTI1A-209ENST00000496445 RSPO1Q2MKA7 263 aaPredicted RBP12.04□□□□□ -0.48
VTI1A-209ENST00000496445 SLC18B1Q6NT16 456 aa12.04□□□□□ -0.48
VTI1A-209ENST00000496445 PGM2L1Q6PCE3 622 aa12.04□□□□□ -0.48
VTI1A-209ENST00000496445 C16orf89Q6UX73 402 aa12.04□□□□□ -0.48
VTI1A-209ENST00000496445 FBXW12Q6X9E4 464 aa12.04□□□□□ -0.48
VTI1A-209ENST00000496445 CFAP77Q6ZQR2 320 aa12.04□□□□□ -0.48
VTI1A-209ENST00000496445 C1QL2Q7Z5L3 287 aa12.04□□□□□ -0.48
VTI1A-209ENST00000496445 ZBTB46Q86UZ6 589 aa12.04□□□□□ -0.48
VTI1A-209ENST00000496445 LINC00346Q8IVM7 164 aa12.04□□□□□ -0.48
VTI1A-209ENST00000496445 ZDHHC21Q8IVQ6 265 aa12.04□□□□□ -0.48
VTI1A-209ENST00000496445 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.04□□□□□ -0.48
VTI1A-209ENST00000496445 SDR9C7Q8NEX9 313 aa12.04□□□□□ -0.48
VTI1A-209ENST00000496445 GJC3Q8NFK1 279 aa12.04□□□□□ -0.48
VTI1A-209ENST00000496445 OR9Q2Q8NGE9 314 aa12.04□□□□□ -0.48
VTI1A-209ENST00000496445 PTP4A1Q93096 173 aa12.04□□□□□ -0.48
VTI1A-209ENST00000496445 COG8Q96MW5 612 aa12.04□□□□□ -0.48
VTI1A-209ENST00000496445 BTBD10Q9BSF8 475 aa12.04□□□□□ -0.48
VTI1A-209ENST00000496445 HDHD2Q9H0R4 259 aa12.04□□□□□ -0.48
VTI1A-209ENST00000496445 SRA1Q9HD15 236 aaKnown RBP12.04□□□□□ -0.48
VTI1A-209ENST00000496445 UBAP1Q9NZ09 502 aa12.04□□□□□ -0.48
VTI1A-209ENST00000496445 IL19Q9UHD0 177 aa12.04□□□□□ -0.48
VTI1A-209ENST00000496445 LYVE1Q9Y5Y7 322 aa12.04□□□□□ -0.48
VTI1A-209ENST00000496445 RGS9O75916 674 aaPredicted RBP12.03□□□□□ -0.48
VTI1A-209ENST00000496445 DCTN3O75935 186 aa12.03□□□□□ -0.48
VTI1A-209ENST00000496445 RENP00797 406 aa12.03□□□□□ -0.48
VTI1A-209ENST00000496445 TNFSF4P23510 183 aa12.03□□□□□ -0.48
VTI1A-209ENST00000496445 ZFP36P26651 326 aaKnown RBP12.03□□□□□ -0.48
VTI1A-209ENST00000496445 MMP16P51512 607 aa12.03□□□□□ -0.48
VTI1A-209ENST00000496445 LCN2P80188 198 aa12.03□□□□□ -0.48
VTI1A-209ENST00000496445 TSPAN31Q12999 210 aa12.03□□□□□ -0.48
VTI1A-209ENST00000496445 ZMYND11Q15326 602 aa12.03□□□□□ -0.48
VTI1A-209ENST00000496445 OR2T2Q6IF00 324 aa12.03□□□□□ -0.48
VTI1A-209ENST00000496445 CYP2R1Q6VVX0 501 aa12.03□□□□□ -0.48
VTI1A-209ENST00000496445 OR10AD1Q8NGE0 317 aa12.03□□□□□ -0.48
VTI1A-209ENST00000496445 GNPDA2Q8TDQ7 276 aa12.03□□□□□ -0.48
VTI1A-209ENST00000496445 APOBEC3DQ96AK3 386 aaPredicted RBP12.03□□□□□ -0.48
VTI1A-209ENST00000496445 OR2V2Q96R30 315 aa12.03□□□□□ -0.48
VTI1A-209ENST00000496445 PLA2G12AQ9BZM1 189 aa12.03□□□□□ -0.48
VTI1A-209ENST00000496445 EGLN3Q9H6Z9 239 aa12.03□□□□□ -0.48
VTI1A-209ENST00000496445 PNRC2Q9NPJ4 139 aaKnown RBP12.03□□□□□ -0.48
VTI1A-209ENST00000496445 MRPL22Q9NWU5 206 aaKnown RBP12.03□□□□□ -0.48
VTI1A-209ENST00000496445 OPN4Q9UHM6 478 aa12.03□□□□□ -0.48
VTI1A-209ENST00000496445 TMCC3Q9ULS5 477 aa12.03□□□□□ -0.48
VTI1A-209ENST00000496445 TCRBV5S2A0A599 114 aa12.02□□□□□ -0.49
VTI1A-209ENST00000496445 H0YL77 283 aa12.02□□□□□ -0.49
VTI1A-209ENST00000496445 J3QLI3 93 aa12.02□□□□□ -0.49
VTI1A-209ENST00000496445 MLNRO43193 412 aa12.02□□□□□ -0.49
VTI1A-209ENST00000496445 FSHBP01225 129 aa12.02□□□□□ -0.49
VTI1A-209ENST00000496445 PSKH1P11801 424 aa12.02□□□□□ -0.49
VTI1A-209ENST00000496445 TNFRSF1AP19438 455 aa12.02□□□□□ -0.49
VTI1A-209ENST00000496445 EPHA1P21709 976 aa12.02□□□□□ -0.49
VTI1A-209ENST00000496445 GGT2P36268 569 aa12.02□□□□□ -0.49
VTI1A-209ENST00000496445 IFNGR2P38484 337 aa12.02□□□□□ -0.49
VTI1A-209ENST00000496445 MAGEA2P43356 314 aa12.02□□□□□ -0.49
VTI1A-209ENST00000496445 PRSS12P56730 875 aa12.02□□□□□ -0.49
VTI1A-209ENST00000496445 SEC61A1P61619 476 aaKnown RBP12.02□□□□□ -0.49
VTI1A-209ENST00000496445 BTG1P62324 171 aa12.02□□□□□ -0.49
VTI1A-209ENST00000496445 MXRA7P84157 204 aa12.02□□□□□ -0.49
VTI1A-209ENST00000496445 KHDRBS1Q07666 443 aaKnown RBP eCLIP12.02□□□□□ -0.49
VTI1A-209ENST00000496445 SPATS1Q496A3 300 aa12.02□□□□□ -0.49
VTI1A-209ENST00000496445 CLEC12AQ5QGZ9 265 aa12.02□□□□□ -0.49
VTI1A-209ENST00000496445 SLC35F1Q5T1Q4 408 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms