RNA–Protein interactions for RNA: ENST00000496347.1

HDAC4-213, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 995 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-213ENST00000496347 CENPAP49450 140 aa13.34□□□□□ -0.27
HDAC4-213ENST00000496347 LMO4P61968 165 aa13.34□□□□□ -0.27
HDAC4-213ENST00000496347 ECH1Q13011 328 aa13.34□□□□□ -0.27
HDAC4-213ENST00000496347 CDK5R2Q13319 367 aa13.34□□□□□ -0.27
HDAC4-213ENST00000496347 TRIM25Q14258 630 aaKnown RBP13.34□□□□□ -0.27
HDAC4-213ENST00000496347 GK3PQ14409 553 aa13.34□□□□□ -0.27
HDAC4-213ENST00000496347 MEP1BQ16820 701 aa13.34□□□□□ -0.27
HDAC4-213ENST00000496347 SLC36A3Q495N2 470 aa13.34□□□□□ -0.27
HDAC4-213ENST00000496347 FAM98BQ52LJ0 330 aaKnown RBP13.34□□□□□ -0.27
HDAC4-213ENST00000496347 SDR9C7Q8NEX9 313 aa13.34□□□□□ -0.27
HDAC4-213ENST00000496347 OR5L1Q8NGL2 311 aa13.34□□□□□ -0.27
HDAC4-213ENST00000496347 SLC7A6Q92536 515 aa13.34□□□□□ -0.27
HDAC4-213ENST00000496347 RAB1CQ92928 201 aa13.34□□□□□ -0.27
HDAC4-213ENST00000496347 POFUT1Q9H488 388 aa13.34□□□□□ -0.27
HDAC4-213ENST00000496347 ZNF665Q9H7R5 613 aa13.34□□□□□ -0.27
HDAC4-213ENST00000496347 MSL2Q9HCI7 577 aa13.34□□□□□ -0.27
HDAC4-213ENST00000496347 TREM2Q9NZC2 230 aa13.34□□□□□ -0.27
HDAC4-213ENST00000496347 WIPI2Q9Y4P8 454 aa13.34□□□□□ -0.27
HDAC4-213ENST00000496347 CACNG2Q9Y698 323 aa13.34□□□□□ -0.27
HDAC4-213ENST00000496347 DYSFO75923 2080 aa13.34□□□□□ -0.27
HDAC4-213ENST00000496347 TRAV20A0A0B4J274 112 aa13.33□□□□□ -0.28
HDAC4-213ENST00000496347 OR6C68A6NDL8 312 aa13.33□□□□□ -0.28
HDAC4-213ENST00000496347 BHLHE40O14503 412 aa13.33□□□□□ -0.28
HDAC4-213ENST00000496347 ANPEPP15144 967 aa13.33□□□□□ -0.28
HDAC4-213ENST00000496347 HOXB6P17509 224 aaKnown RBP13.33□□□□□ -0.28
HDAC4-213ENST00000496347 TNFRSF1AP19438 455 aa13.33□□□□□ -0.28
HDAC4-213ENST00000496347 TNFAIP6P98066 277 aaPredicted RBP13.33□□□□□ -0.28
HDAC4-213ENST00000496347 KHDRBS1Q07666 443 aaKnown RBP eCLIP13.33□□□□□ -0.28
HDAC4-213ENST00000496347 KRTAP27-1Q3LI81 207 aa13.33□□□□□ -0.28
HDAC4-213ENST00000496347 CLEC12AQ5QGZ9 265 aa13.33□□□□□ -0.28
HDAC4-213ENST00000496347 AVPI1Q5T686 147 aa13.33□□□□□ -0.28
HDAC4-213ENST00000496347 OTPQ5XKR4 325 aa13.33□□□□□ -0.28
HDAC4-213ENST00000496347 SLC18B1Q6NT16 456 aa13.33□□□□□ -0.28
HDAC4-213ENST00000496347 FBXW12Q6X9E4 464 aa13.33□□□□□ -0.28
HDAC4-213ENST00000496347 RINLQ6ZS11 566 aa13.33□□□□□ -0.28
HDAC4-213ENST00000496347 RASSF6Q6ZTQ3 369 aa13.33□□□□□ -0.28
HDAC4-213ENST00000496347 ZSCAN2Q7Z7L9 614 aaPredicted RBP13.33□□□□□ -0.28
HDAC4-213ENST00000496347 PEG10Q86TG7 708 aaKnown RBP13.33□□□□□ -0.28
HDAC4-213ENST00000496347 TEX29Q8N6K0 151 aa13.33□□□□□ -0.28
HDAC4-213ENST00000496347 AQP11Q8NBQ7 271 aa13.33□□□□□ -0.28
HDAC4-213ENST00000496347 OR52E2Q8NGJ4 325 aa13.33□□□□□ -0.28
HDAC4-213ENST00000496347 CCDC124Q96CT7 223 aaKnown RBP13.33□□□□□ -0.28
HDAC4-213ENST00000496347 HAVCR1Q96D42 359 aa13.33□□□□□ -0.28
HDAC4-213ENST00000496347 ATF6BQ99941 703 aa13.33□□□□□ -0.28
HDAC4-213ENST00000496347 C1orf21Q9H246 121 aa13.33□□□□□ -0.28
HDAC4-213ENST00000496347 EGLN3Q9H6Z9 239 aa13.33□□□□□ -0.28
HDAC4-213ENST00000496347 REEP1Q9H902 201 aa13.33□□□□□ -0.28
HDAC4-213ENST00000496347 TBC1D23Q9NUY8 699 aa13.33□□□□□ -0.28
HDAC4-213ENST00000496347 HIF1ANQ9NWT6 349 aa13.33□□□□□ -0.28
HDAC4-213ENST00000496347 IL20Q9NYY1 176 aa13.33□□□□□ -0.28
HDAC4-213ENST00000496347 SAMHD1Q9Y3Z3 626 aaKnown RBP13.33□□□□□ -0.28
HDAC4-213ENST00000496347 SURF4O15260 269 aa13.32□□□□□ -0.28
HDAC4-213ENST00000496347 DEAF1O75398 565 aaPredicted RBP13.32□□□□□ -0.28
HDAC4-213ENST00000496347 GPANK1O95872 356 aa13.32□□□□□ -0.28
HDAC4-213ENST00000496347 IGHV2-5P01817 119 aa13.32□□□□□ -0.28
HDAC4-213ENST00000496347 DBHP09172 617 aa13.32□□□□□ -0.28
HDAC4-213ENST00000496347 GGT2P36268 569 aa13.32□□□□□ -0.28
HDAC4-213ENST00000496347 SRP14P37108 136 aaKnown RBP13.32□□□□□ -0.28
HDAC4-213ENST00000496347 MVKQ03426 396 aa13.32□□□□□ -0.28
HDAC4-213ENST00000496347 SCGB2A2Q13296 93 aa13.32□□□□□ -0.28
HDAC4-213ENST00000496347 OR2T5Q6IEZ7 315 aa13.32□□□□□ -0.28
HDAC4-213ENST00000496347 CFAP77Q6ZQR2 320 aa13.32□□□□□ -0.28
HDAC4-213ENST00000496347 LNX2Q8N448 690 aa13.32□□□□□ -0.28
HDAC4-213ENST00000496347 OR2T4Q8NH00 348 aa13.32□□□□□ -0.28
HDAC4-213ENST00000496347 OR2T29Q8NH02 315 aa13.32□□□□□ -0.28
HDAC4-213ENST00000496347 CCL17Q92583 94 aa13.32□□□□□ -0.28
HDAC4-213ENST00000496347 CMBLQ96DG6 245 aa13.32□□□□□ -0.28
HDAC4-213ENST00000496347 LRGUKQ96M69 825 aa13.32□□□□□ -0.28
HDAC4-213ENST00000496347 GAL3ST1Q99999 423 aa13.32□□□□□ -0.28
HDAC4-213ENST00000496347 DGCR6LQ9BY27 220 aa13.32□□□□□ -0.28
HDAC4-213ENST00000496347 PLA2G12AQ9BZM1 189 aa13.32□□□□□ -0.28
HDAC4-213ENST00000496347 FN3KQ9H479 309 aa13.32□□□□□ -0.28
HDAC4-213ENST00000496347 CYB5R1Q9UHQ9 305 aa13.32□□□□□ -0.28
HDAC4-213ENST00000496347 BAIAP2Q9UQB8 552 aa13.32□□□□□ -0.28
HDAC4-213ENST00000496347 STARD10Q9Y365 291 aa13.32□□□□□ -0.28
HDAC4-213ENST00000496347 ANK2Q01484 3957 aa13.32□□□□□ -0.28
HDAC4-213ENST00000496347 ARRDC5A6NEK1 342 aa13.31□□□□□ -0.28
HDAC4-213ENST00000496347 PNPP00491 289 aa13.31□□□□□ -0.28
HDAC4-213ENST00000496347 HLA-DQA2P01906 255 aa13.31□□□□□ -0.28
HDAC4-213ENST00000496347 RAP2AP10114 183 aa13.31□□□□□ -0.28
HDAC4-213ENST00000496347 ACSM5Q6NUN0 579 aa13.31□□□□□ -0.28
HDAC4-213ENST00000496347 CORO6Q6QEF8 472 aa13.31□□□□□ -0.28
HDAC4-213ENST00000496347 COLCA1Q6ZS62 124 aa13.31□□□□□ -0.28
HDAC4-213ENST00000496347 RFLNBQ8N5W9 214 aa13.31□□□□□ -0.28
HDAC4-213ENST00000496347 PROKR2Q8NFJ6 384 aa13.31□□□□□ -0.28
HDAC4-213ENST00000496347 OR2Z1Q8NG97 314 aa13.31□□□□□ -0.28
HDAC4-213ENST00000496347 OR8D4Q8NGM9 314 aa13.31□□□□□ -0.28
HDAC4-213ENST00000496347 OR2AJ1Q8NGZ0 328 aa13.31□□□□□ -0.28
HDAC4-213ENST00000496347 PTP4A1Q93096 173 aa13.31□□□□□ -0.28
HDAC4-213ENST00000496347 PITX2Q99697 317 aa13.31□□□□□ -0.28
HDAC4-213ENST00000496347 LPAR2Q9HBW0 351 aa13.31□□□□□ -0.28
HDAC4-213ENST00000496347 SRA1Q9HD15 236 aaKnown RBP13.31□□□□□ -0.28
HDAC4-213ENST00000496347 IL19Q9UHD0 177 aa13.31□□□□□ -0.28
HDAC4-213ENST00000496347 A0A0G2JMP0 313 aa13.3□□□□□ -0.28
HDAC4-213ENST00000496347 A0A0X1KG70 313 aa13.3□□□□□ -0.28
HDAC4-213ENST00000496347 ISPDA4D126 451 aa13.3□□□□□ -0.28
HDAC4-213ENST00000496347 T-ENOLP0DO92 83 aa13.3□□□□□ -0.28
HDAC4-213ENST00000496347 ERFP50548 548 aa13.3□□□□□ -0.28
HDAC4-213ENST00000496347 MS4A2Q01362 244 aa13.3□□□□□ -0.28
HDAC4-213ENST00000496347 TRAP1Q12931 704 aaKnown RBP13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms