RNA–Protein interactions for RNA: ENST00000496189.1

SF3A1-209, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 693 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-209ENST00000496189 MEP1BQ16820 701 aa14.06□□□□□ -0.16
SF3A1-209ENST00000496189 ZMAT1Q5H9K5 638 aa14.06□□□□□ -0.16
SF3A1-209ENST00000496189 ELFN2Q5R3F8 820 aa14.06□□□□□ -0.16
SF3A1-209ENST00000496189 SLX4IPQ5VYV7 408 aa14.06□□□□□ -0.16
SF3A1-209ENST00000496189 PLBD1Q6P4A8 553 aa14.06□□□□□ -0.16
SF3A1-209ENST00000496189 ZNF771Q7L3S4 317 aaPredicted RBP14.06□□□□□ -0.16
SF3A1-209ENST00000496189 CXXC5Q7LFL8 322 aaKnown RBP14.06□□□□□ -0.16
SF3A1-209ENST00000496189 OR5L1Q8NGL2 311 aa14.06□□□□□ -0.16
SF3A1-209ENST00000496189 PITX2Q99697 317 aa14.06□□□□□ -0.16
SF3A1-209ENST00000496189 OR51V1Q9H2C8 321 aa14.06□□□□□ -0.16
SF3A1-209ENST00000496189 TPK1Q9H3S4 243 aa14.06□□□□□ -0.16
SF3A1-209ENST00000496189 H2AFY2Q9P0M6 372 aaPredicted RBP14.06□□□□□ -0.16
SF3A1-209ENST00000496189 FAM183AA6NL82 134 aa14.05□□□□□ -0.16
SF3A1-209ENST00000496189 J3QW42 95 aa14.05□□□□□ -0.16
SF3A1-209ENST00000496189 RER1O15258 196 aa14.05□□□□□ -0.16
SF3A1-209ENST00000496189 TPD52L2O43399 206 aaKnown RBP14.05□□□□□ -0.16
SF3A1-209ENST00000496189 ICMTO60725 284 aa14.05□□□□□ -0.16
SF3A1-209ENST00000496189 GLCEO94923 617 aa14.05□□□□□ -0.16
SF3A1-209ENST00000496189 GPANK1O95872 356 aa14.05□□□□□ -0.16
SF3A1-209ENST00000496189 TFP02787 698 aa14.05□□□□□ -0.16
SF3A1-209ENST00000496189 GYPBP06028 91 aa14.05□□□□□ -0.16
SF3A1-209ENST00000496189 DAOP14920 347 aa14.05□□□□□ -0.16
SF3A1-209ENST00000496189 LIPAP38571 399 aa14.05□□□□□ -0.16
SF3A1-209ENST00000496189 ALDH3B1P43353 468 aa14.05□□□□□ -0.16
SF3A1-209ENST00000496189 CDC42P60953 191 aa14.05□□□□□ -0.16
SF3A1-209ENST00000496189 ERVS71-1P61550 626 aa14.05□□□□□ -0.16
SF3A1-209ENST00000496189 TRIP10Q15642 601 aa14.05□□□□□ -0.16
SF3A1-209ENST00000496189 PCGF3Q3KNV8 242 aa14.05□□□□□ -0.16
SF3A1-209ENST00000496189 KLHL12Q53G59 568 aa14.05□□□□□ -0.16
SF3A1-209ENST00000496189 SPATA46Q5T0L3 261 aa14.05□□□□□ -0.16
SF3A1-209ENST00000496189 LRP11Q86VZ4 500 aa14.05□□□□□ -0.16
SF3A1-209ENST00000496189 CPOQ8IVL8 374 aa14.05□□□□□ -0.16
SF3A1-209ENST00000496189 ZNF101Q8IZC7 436 aa14.05□□□□□ -0.16
SF3A1-209ENST00000496189 OR51L1Q8NGJ5 315 aa14.05□□□□□ -0.16
SF3A1-209ENST00000496189 COQ7Q99807 217 aa14.05□□□□□ -0.16
SF3A1-209ENST00000496189 OR2J1Q9GZK6 312 aa14.05□□□□□ -0.16
SF3A1-209ENST00000496189 MED20Q9H944 212 aa14.05□□□□□ -0.16
SF3A1-209ENST00000496189 HINT3Q9NQE9 182 aaKnown RBP14.05□□□□□ -0.16
SF3A1-209ENST00000496189 CYSLTR2Q9NS75 346 aa14.05□□□□□ -0.16
SF3A1-209ENST00000496189 TBCCD1Q9NVR7 557 aa14.05□□□□□ -0.16
SF3A1-209ENST00000496189 CGGBP1Q9UFW8 167 aaPredicted RBP14.05□□□□□ -0.16
SF3A1-209ENST00000496189 LHFPL6Q9Y693 200 aa14.05□□□□□ -0.16
SF3A1-209ENST00000496189 IGLV3-9A0A075B6K5 115 aa14.04□□□□□ -0.16
SF3A1-209ENST00000496189 LY6HO94772 140 aa14.04□□□□□ -0.16
SF3A1-209ENST00000496189 CLPTM1O96005 669 aa14.04□□□□□ -0.16
SF3A1-209ENST00000496189 IGHV3-13P01766 116 aa14.04□□□□□ -0.16
SF3A1-209ENST00000496189 EPHA2P29317 976 aa14.04□□□□□ -0.16
SF3A1-209ENST00000496189 GSTT1P30711 240 aa14.04□□□□□ -0.16
SF3A1-209ENST00000496189 WNT5AP41221 380 aa14.04□□□□□ -0.16
SF3A1-209ENST00000496189 RPS7P62081 194 aaKnown RBP14.04□□□□□ -0.16
SF3A1-209ENST00000496189 MAD2L1BPQ15013 274 aaPredicted RBP14.04□□□□□ -0.16
SF3A1-209ENST00000496189 ALKBH6Q3KRA9 238 aa14.04□□□□□ -0.16
SF3A1-209ENST00000496189 SLC35D3Q5M8T2 416 aa14.04□□□□□ -0.16
SF3A1-209ENST00000496189 MBNL2Q5VZF2 373 aaKnown RBP14.04□□□□□ -0.16
SF3A1-209ENST00000496189 C12orf73Q69YU5 71 aa14.04□□□□□ -0.16
SF3A1-209ENST00000496189 DNM1P46Q6ZS02 220 aa14.04□□□□□ -0.16
SF3A1-209ENST00000496189 RFPL4BQ6ZWI9 263 aa14.04□□□□□ -0.16
SF3A1-209ENST00000496189 LINC00346Q8IVM7 164 aa14.04□□□□□ -0.16
SF3A1-209ENST00000496189 CIARTQ8N365 385 aaPredicted RBP14.04□□□□□ -0.16
SF3A1-209ENST00000496189 SLC25A40Q8TBP6 338 aa14.04□□□□□ -0.16
SF3A1-209ENST00000496189 C10orf105Q8TEF2 133 aa14.04□□□□□ -0.16
SF3A1-209ENST00000496189 UBASH3BQ8TF42 649 aa14.04□□□□□ -0.16
SF3A1-209ENST00000496189 PTP4A1Q93096 173 aa14.04□□□□□ -0.16
SF3A1-209ENST00000496189 ATF6BQ99941 703 aa14.04□□□□□ -0.16
SF3A1-209ENST00000496189 IMPAD1Q9NX62 359 aa14.04□□□□□ -0.16
SF3A1-209ENST00000496189 IGHV4-30-2A0A087WSY4 118 aa14.03□□□□□ -0.16
SF3A1-209ENST00000496189 TVP23AA6NH52 213 aa14.03□□□□□ -0.16
SF3A1-209ENST00000496189 TLX2O43763 284 aaPredicted RBP14.03□□□□□ -0.16
SF3A1-209ENST00000496189 TIMM8AO60220 97 aaPredicted RBP14.03□□□□□ -0.16
SF3A1-209ENST00000496189 HEXAP06865 529 aa14.03□□□□□ -0.16
SF3A1-209ENST00000496189 CLUP10909 449 aa14.03□□□□□ -0.16
SF3A1-209ENST00000496189 ENTPD1P49961 510 aa14.03□□□□□ -0.16
SF3A1-209ENST00000496189 MSMPQ1L6U9 139 aa14.03□□□□□ -0.16
SF3A1-209ENST00000496189 CCDC92Q53HC0 331 aaPredicted RBP14.03□□□□□ -0.16
SF3A1-209ENST00000496189 LCN1P1Q5VSP4 162 aa14.03□□□□□ -0.16
SF3A1-209ENST00000496189 OTPQ5XKR4 325 aa14.03□□□□□ -0.16
SF3A1-209ENST00000496189 CORO6Q6QEF8 472 aa14.03□□□□□ -0.16
SF3A1-209ENST00000496189 ZCCHC24Q8N2G6 241 aaKnown RBP14.03□□□□□ -0.16
SF3A1-209ENST00000496189 PACRGLQ8N7B6 248 aa14.03□□□□□ -0.16
SF3A1-209ENST00000496189 TCEANCQ8N8B7 351 aa14.03□□□□□ -0.16
SF3A1-209ENST00000496189 TMEM163Q8TC26 289 aa14.03□□□□□ -0.16
SF3A1-209ENST00000496189 KLF14Q8TD94 323 aaPredicted RBP14.03□□□□□ -0.16
SF3A1-209ENST00000496189 SPTSSAQ969W0 71 aa14.03□□□□□ -0.16
SF3A1-209ENST00000496189 APOBEC3DQ96AK3 386 aaPredicted RBP14.03□□□□□ -0.16
SF3A1-209ENST00000496189 MARS2Q96GW9 593 aaKnown RBP14.03□□□□□ -0.16
SF3A1-209ENST00000496189 RDH12Q96NR8 316 aa14.03□□□□□ -0.16
SF3A1-209ENST00000496189 INTS14Q96SY0 518 aa14.03□□□□□ -0.16
SF3A1-209ENST00000496189 DECR2Q9NUI1 292 aa14.03□□□□□ -0.16
SF3A1-209ENST00000496189 MRPL22Q9NWU5 206 aaKnown RBP14.03□□□□□ -0.16
SF3A1-209ENST00000496189 MYEF2Q9P2K5 600 aaKnown RBP14.03□□□□□ -0.16
SF3A1-209ENST00000496189 CYB5R1Q9UHQ9 305 aa14.03□□□□□ -0.16
SF3A1-209ENST00000496189 ARFGEF3Q5TH69 2177 aa14.03□□□□□ -0.16
SF3A1-209ENST00000496189 C17orf100A8MU93 164 aa14.02□□□□□ -0.17
SF3A1-209ENST00000496189 ZNF593O00488 134 aaPredicted RBP14.02□□□□□ -0.17
SF3A1-209ENST00000496189 PRKYO43930 277 aa14.02□□□□□ -0.17
SF3A1-209ENST00000496189 NGFP01138 241 aa14.02□□□□□ -0.17
SF3A1-209ENST00000496189 SPARCP09486 303 aa14.02□□□□□ -0.17
SF3A1-209ENST00000496189 NAT2P11245 290 aa14.02□□□□□ -0.17
SF3A1-209ENST00000496189 GGT2P36268 569 aa14.02□□□□□ -0.17
SF3A1-209ENST00000496189 POLR2IP36954 125 aaKnown RBP14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms