RNA–Protein interactions for RNA: ENST00000495010.5

VARS-228, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 1,007 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-228ENST00000495010 RPL15P61313 204 aaKnown RBP11.88□□□□□ -0.51
VARS-228ENST00000495010 RELBQ01201 579 aa11.88□□□□□ -0.51
VARS-228ENST00000495010 AQP6Q13520 282 aa11.88□□□□□ -0.51
VARS-228ENST00000495010 ZNF181Q2M3W8 571 aa11.88□□□□□ -0.51
VARS-228ENST00000495010 WDR25Q64LD2 544 aaPredicted RBP11.88□□□□□ -0.51
VARS-228ENST00000495010 RUSC1-AS1Q66K80 236 aa11.88□□□□□ -0.51
VARS-228ENST00000495010 ASPHD2Q6ICH7 369 aa11.88□□□□□ -0.51
VARS-228ENST00000495010 DCDC5Q6ZRR9 648 aa11.88□□□□□ -0.51
VARS-228ENST00000495010 RHOUQ7L0Q8 258 aa11.88□□□□□ -0.51
VARS-228ENST00000495010 OAFQ86UD1 273 aa11.88□□□□□ -0.51
VARS-228ENST00000495010 MICU2Q8IYU8 434 aa11.88□□□□□ -0.51
VARS-228ENST00000495010 PCYOX1LQ8NBM8 494 aa11.88□□□□□ -0.51
VARS-228ENST00000495010 OR11L1Q8NGX0 322 aa11.88□□□□□ -0.51
VARS-228ENST00000495010 SSMEM1Q8WWF3 244 aa11.88□□□□□ -0.51
VARS-228ENST00000495010 GATAD2BQ8WXI9 593 aa11.88□□□□□ -0.51
VARS-228ENST00000495010 SLC7A6Q92536 515 aa11.88□□□□□ -0.51
VARS-228ENST00000495010 DYRK2Q92630 601 aa11.88□□□□□ -0.51
VARS-228ENST00000495010 DACT3Q96B18 629 aaPredicted RBP11.88□□□□□ -0.51
VARS-228ENST00000495010 TECTBQ96PL2 329 aa11.88□□□□□ -0.51
VARS-228ENST00000495010 ECSITQ9BQ95 431 aa11.88□□□□□ -0.51
VARS-228ENST00000495010 TCF7L1Q9HCS4 588 aa11.88□□□□□ -0.51
VARS-228ENST00000495010 RAB21Q9UL25 225 aa11.88□□□□□ -0.51
VARS-228ENST00000495010 VWFP04275 2813 aa11.87□□□□□ -0.51
VARS-228ENST00000495010 F5H5P2 479 aa11.87□□□□□ -0.51
VARS-228ENST00000495010 H0YL77 283 aa11.87□□□□□ -0.51
VARS-228ENST00000495010 P2RY10O00398 339 aa11.87□□□□□ -0.51
VARS-228ENST00000495010 FBP2O00757 339 aa11.87□□□□□ -0.51
VARS-228ENST00000495010 TOX4O94842 621 aa11.87□□□□□ -0.51
VARS-228ENST00000495010 FSTL3O95633 263 aa11.87□□□□□ -0.51
VARS-228ENST00000495010 CRYBA2P53672 197 aa11.87□□□□□ -0.51
VARS-228ENST00000495010 CYLC2Q14093 348 aaPredicted RBP11.87□□□□□ -0.51
VARS-228ENST00000495010 ANKDD1AQ495B1 522 aa11.87□□□□□ -0.51
VARS-228ENST00000495010 FAM201AQ5SY85 155 aa11.87□□□□□ -0.51
VARS-228ENST00000495010 CD276Q5ZPR3 534 aa11.87□□□□□ -0.51
VARS-228ENST00000495010 FBXW12Q6X9E4 464 aa11.87□□□□□ -0.51
VARS-228ENST00000495010 C1QL4Q86Z23 238 aa11.87□□□□□ -0.51
VARS-228ENST00000495010 LRRC75AQ8NAA5 344 aa11.87□□□□□ -0.51
VARS-228ENST00000495010 BHLHE23Q8NDY6 225 aa11.87□□□□□ -0.51
VARS-228ENST00000495010 OR1F12Q8NHA8 337 aa11.87□□□□□ -0.51
VARS-228ENST00000495010 TLCD1Q96CP7 247 aa11.87□□□□□ -0.51
VARS-228ENST00000495010 SH3GL1Q99961 368 aa11.87□□□□□ -0.51
VARS-228ENST00000495010 CDADC1Q9BWV3 514 aa11.87□□□□□ -0.51
VARS-228ENST00000495010 TRIM15Q9C019 465 aa11.87□□□□□ -0.51
VARS-228ENST00000495010 NDEL1Q9GZM8 345 aa11.87□□□□□ -0.51
VARS-228ENST00000495010 RERGLQ9H628 205 aa11.87□□□□□ -0.51
VARS-228ENST00000495010 TMEM100Q9NV29 134 aa11.87□□□□□ -0.51
VARS-228ENST00000495010 ASH2LQ9UBL3 628 aa11.87□□□□□ -0.51
VARS-228ENST00000495010 SLC22A31A6NKX4 558 aa11.86□□□□□ -0.51
VARS-228ENST00000495010 EFCAB9A8MZ26 197 aa11.86□□□□□ -0.51
VARS-228ENST00000495010 TNFRSF13BO14836 293 aaPredicted RBP11.86□□□□□ -0.51
VARS-228ENST00000495010 AHCYL1O43865 530 aa11.86□□□□□ -0.51
VARS-228ENST00000495010 LIPFP07098 398 aa11.86□□□□□ -0.51
VARS-228ENST00000495010 FPR3P25089 353 aa11.86□□□□□ -0.51
VARS-228ENST00000495010 NPY4RP50391 375 aa11.86□□□□□ -0.51
VARS-228ENST00000495010 LYPD2Q6UXB3 125 aa11.86□□□□□ -0.51
VARS-228ENST00000495010 SCCPDHQ8NBX0 429 aa11.86□□□□□ -0.51
VARS-228ENST00000495010 FAM110DQ8TAY7 271 aaPredicted RBP11.86□□□□□ -0.51
VARS-228ENST00000495010 TSPEARQ8WU66 669 aa11.86□□□□□ -0.51
VARS-228ENST00000495010 APOBEC3DQ96AK3 386 aaPredicted RBP11.86□□□□□ -0.51
VARS-228ENST00000495010 TPD52L3Q96J77 140 aa11.86□□□□□ -0.51
VARS-228ENST00000495010 HCAR1Q9BXC0 346 aa11.86□□□□□ -0.51
VARS-228ENST00000495010 MMADHCQ9H3L0 296 aaPredicted RBP11.86□□□□□ -0.51
VARS-228ENST00000495010 TMBIM4Q9HC24 238 aa11.86□□□□□ -0.51
VARS-228ENST00000495010 ERVK-18Q9QC07 812 aa11.86□□□□□ -0.51
VARS-228ENST00000495010 POLR1DQ9Y2S0 133 aa11.86□□□□□ -0.51
VARS-228ENST00000495010 ZNF281Q9Y2X9 895 aa11.86□□□□□ -0.51
VARS-228ENST00000495010 DOCK11Q5JSL3 2073 aa11.85□□□□□ -0.51
VARS-228ENST00000495010 TEX13CA0A0J9YWL9 993 aa11.85□□□□□ -0.51
VARS-228ENST00000495010 OR6C6A6NF89 314 aa11.85□□□□□ -0.51
VARS-228ENST00000495010 ZNF879B4DU55 563 aa11.85□□□□□ -0.51
VARS-228ENST00000495010 GPR137BO60478 399 aa11.85□□□□□ -0.51
VARS-228ENST00000495010 SFTPBP07988 381 aa11.85□□□□□ -0.51
VARS-228ENST00000495010 DBHP09172 617 aa11.85□□□□□ -0.51
VARS-228ENST00000495010 CFHR2P36980 270 aa11.85□□□□□ -0.51
VARS-228ENST00000495010 SLC9A3P48764 834 aa11.85□□□□□ -0.51
VARS-228ENST00000495010 GZMMP51124 257 aa11.85□□□□□ -0.51
VARS-228ENST00000495010 KRTAP10-3P60369 221 aa11.85□□□□□ -0.51
VARS-228ENST00000495010 KCNJ8Q15842 424 aa11.85□□□□□ -0.51
VARS-228ENST00000495010 LRRC23Q53EV4 343 aaPredicted RBP11.85□□□□□ -0.51
VARS-228ENST00000495010 METTL11BQ5VVY1 283 aa11.85□□□□□ -0.51
VARS-228ENST00000495010 NANOGP8Q6NSW7 305 aa11.85□□□□□ -0.51
VARS-228ENST00000495010 ERICH5Q6P6B1 374 aa11.85□□□□□ -0.51
VARS-228ENST00000495010 NRMQ8IXM6 262 aa11.85□□□□□ -0.51
VARS-228ENST00000495010 LINC01006Q8NI28 216 aa11.85□□□□□ -0.51
VARS-228ENST00000495010 DYDC1Q8WWB3 177 aa11.85□□□□□ -0.51
VARS-228ENST00000495010 ERGIC1Q969X5 290 aa11.85□□□□□ -0.51
VARS-228ENST00000495010 PRRC1Q96M27 445 aa11.85□□□□□ -0.51
VARS-228ENST00000495010 ZNF570Q96NI8 536 aa11.85□□□□□ -0.51
VARS-228ENST00000495010 FNDC11Q9BVV2 318 aa11.85□□□□□ -0.51
VARS-228ENST00000495010 ACOXLQ9NUZ1 547 aa11.85□□□□□ -0.51
VARS-228ENST00000495010 CENPVL3A0A0U1RRI6 287 aa11.84□□□□□ -0.51
VARS-228ENST00000495010 PRSS37A4D1T9 235 aa11.84□□□□□ -0.51
VARS-228ENST00000495010 IQCF6A8MYZ5 107 aa11.84□□□□□ -0.51
VARS-228ENST00000495010 C22orf46C9J442 243 aa11.84□□□□□ -0.51
VARS-228ENST00000495010 MLNRO43193 412 aa11.84□□□□□ -0.51
VARS-228ENST00000495010 SLC16A7O60669 478 aa11.84□□□□□ -0.51
VARS-228ENST00000495010 KHDRBS3O75525 346 aaKnown RBP11.84□□□□□ -0.51
VARS-228ENST00000495010 CLPXO76031 633 aa11.84□□□□□ -0.51
VARS-228ENST00000495010 HLA-DPB1P04440 258 aa11.84□□□□□ -0.51
VARS-228ENST00000495010 PMELP40967 661 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 80 ms