RNA–Protein interactions for RNA: ENST00000494047.5

RFC4-214, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 1,393 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-214ENST00000494047 PHB2Q99623 299 aa10.3□□□□□ -0.76
RFC4-214ENST00000494047 SMAD5Q99717 465 aaKnown RBP10.3□□□□□ -0.76
RFC4-214ENST00000494047 CMKLR1Q99788 373 aa10.3□□□□□ -0.76
RFC4-214ENST00000494047 FXYD6Q9H0Q3 95 aa10.3□□□□□ -0.76
RFC4-214ENST00000494047 SERINC1Q9NRX5 453 aa10.3□□□□□ -0.76
RFC4-214ENST00000494047 CA10Q9NS85 328 aa10.3□□□□□ -0.76
RFC4-214ENST00000494047 GHRLQ9UBU3 117 aa10.3□□□□□ -0.76
RFC4-214ENST00000494047 OR52A1Q9UKL2 312 aa10.3□□□□□ -0.76
RFC4-214ENST00000494047 KNL1Q8NG31 2342 aa10.3□□□□□ -0.76
RFC4-214ENST00000494047 A0A0B4J2A0 478 aa10.29□□□□□ -0.76
RFC4-214ENST00000494047 A0A1B0GTI1 187 aa10.29□□□□□ -0.76
RFC4-214ENST00000494047 LOC107986453A0A1B0GWG9 222 aa10.29□□□□□ -0.76
RFC4-214ENST00000494047 FAM171A2A8MVW0 826 aa10.29□□□□□ -0.76
RFC4-214ENST00000494047 PSMD9O00233 223 aa10.29□□□□□ -0.76
RFC4-214ENST00000494047 GDF9O60383 454 aa10.29□□□□□ -0.76
RFC4-214ENST00000494047 SDC3O75056 442 aa10.29□□□□□ -0.76
RFC4-214ENST00000494047 CD3DP04234 171 aa10.29□□□□□ -0.76
RFC4-214ENST00000494047 AMY2AP04746 511 aa10.29□□□□□ -0.76
RFC4-214ENST00000494047 CFIP05156 583 aa10.29□□□□□ -0.76
RFC4-214ENST00000494047 CELA2BP08218 269 aaPredicted RBP10.29□□□□□ -0.76
RFC4-214ENST00000494047 GSTP1P09211 210 aaKnown RBP10.29□□□□□ -0.76
RFC4-214ENST00000494047 H2BFMP0C1H6 154 aa10.29□□□□□ -0.76
RFC4-214ENST00000494047 ZNF35P13682 527 aa10.29□□□□□ -0.76
RFC4-214ENST00000494047 CD34P28906 385 aa10.29□□□□□ -0.76
RFC4-214ENST00000494047 MPGP29372 298 aa10.29□□□□□ -0.76
RFC4-214ENST00000494047 CX3CR1P49238 355 aa10.29□□□□□ -0.76
RFC4-214ENST00000494047 NR0B1P51843 470 aaKnown RBP10.29□□□□□ -0.76
RFC4-214ENST00000494047 INSM1Q01101 510 aaPredicted RBP10.29□□□□□ -0.76
RFC4-214ENST00000494047 PMPCAQ10713 525 aa10.29□□□□□ -0.76
RFC4-214ENST00000494047 C1orf61Q13536 156 aa10.29□□□□□ -0.76
RFC4-214ENST00000494047 PNLIPRP3Q17RR3 467 aa10.29□□□□□ -0.76
RFC4-214ENST00000494047 SLC25A53Q5H9E4 307 aa10.29□□□□□ -0.76
RFC4-214ENST00000494047 GLYATL3Q5SZD4 288 aa10.29□□□□□ -0.76
RFC4-214ENST00000494047 THEM4Q5T1C6 240 aa10.29□□□□□ -0.76
RFC4-214ENST00000494047 CHMP1BQ7LBR1 199 aa10.29□□□□□ -0.76
RFC4-214ENST00000494047 ZNF761Q86XN6 746 aaPredicted RBP10.29□□□□□ -0.76
RFC4-214ENST00000494047 C9orf40Q8IXQ3 194 aa10.29□□□□□ -0.76
RFC4-214ENST00000494047 MUC20Q8N307 709 aaPredicted RBP10.29□□□□□ -0.76
RFC4-214ENST00000494047 ARRDC1Q8N5I2 433 aa10.29□□□□□ -0.76
RFC4-214ENST00000494047 KCNRGQ8N5I3 272 aa10.29□□□□□ -0.76
RFC4-214ENST00000494047 SLC25A43Q8WUT9 341 aaPredicted RBP10.29□□□□□ -0.76
RFC4-214ENST00000494047 ASB10Q8WXI3 467 aa10.29□□□□□ -0.76
RFC4-214ENST00000494047 AQP3Q92482 292 aa10.29□□□□□ -0.76
RFC4-214ENST00000494047 CPNE2Q96FN4 548 aaPredicted RBP10.29□□□□□ -0.76
RFC4-214ENST00000494047 MRGPRX4Q96LA9 322 aa10.29□□□□□ -0.76
RFC4-214ENST00000494047 NUDT9Q9BW91 350 aa10.29□□□□□ -0.76
RFC4-214ENST00000494047 POFUT1Q9H488 388 aa10.29□□□□□ -0.76
RFC4-214ENST00000494047 LDAHQ9H6V9 325 aa10.29□□□□□ -0.76
RFC4-214ENST00000494047 BEX1Q9HBH7 125 aa10.29□□□□□ -0.76
RFC4-214ENST00000494047 CHST11Q9NPF2 352 aa10.29□□□□□ -0.76
RFC4-214ENST00000494047 SHPKQ9UHJ6 478 aa10.29□□□□□ -0.76
RFC4-214ENST00000494047 GTF2A1LQ9UNN4 478 aa10.29□□□□□ -0.76
RFC4-214ENST00000494047 SLC5A6Q9Y289 635 aa10.29□□□□□ -0.76
RFC4-214ENST00000494047 RPH3AQ9Y2J0 694 aaPredicted RBP10.29□□□□□ -0.76
RFC4-214ENST00000494047 ASCC3Q8N3C0 2202 aaKnown RBP10.29□□□□□ -0.76
RFC4-214ENST00000494047 PCNX2A6NKB5 2137 aa10.29□□□□□ -0.76
RFC4-214ENST00000494047 DMXL1Q9Y485 3027 aa10.29□□□□□ -0.76
RFC4-214ENST00000494047 TNFSF12-TNFSF13A0A0A6YY99 330 aa10.28□□□□□ -0.76
RFC4-214ENST00000494047 IGHV5-51A0A0C4DH38 117 aa10.28□□□□□ -0.76
RFC4-214ENST00000494047 CPED1A4D0V7 1026 aa10.28□□□□□ -0.76
RFC4-214ENST00000494047 OR14I1A6ND48 311 aa10.28□□□□□ -0.76
RFC4-214ENST00000494047 D6RAR5 112 aa10.28□□□□□ -0.76
RFC4-214ENST00000494047 FTCDNL1E5RQL4 147 aa10.28□□□□□ -0.76
RFC4-214ENST00000494047 C11orf98E9PRG8 122 aa10.28□□□□□ -0.76
RFC4-214ENST00000494047 H3BMH7 237 aa10.28□□□□□ -0.76
RFC4-214ENST00000494047 TM4SF5O14894 197 aa10.28□□□□□ -0.76
RFC4-214ENST00000494047 BCAT2O15382 392 aaPredicted RBP10.28□□□□□ -0.76
RFC4-214ENST00000494047 OIP5O43482 229 aa10.28□□□□□ -0.76
RFC4-214ENST00000494047 BCL2L11O43521 198 aa10.28□□□□□ -0.76
RFC4-214ENST00000494047 SRSF10O75494 262 aaKnown RBP10.28□□□□□ -0.76
RFC4-214ENST00000494047 IL2RAP01589 272 aa10.28□□□□□ -0.76
RFC4-214ENST00000494047 APOC1P02654 83 aa10.28□□□□□ -0.76
RFC4-214ENST00000494047 VSIG10L2P0DP72 767 aa10.28□□□□□ -0.76
RFC4-214ENST00000494047 CTLA4P16410 223 aa10.28□□□□□ -0.76
RFC4-214ENST00000494047 RAB3AP20336 220 aa10.28□□□□□ -0.76
RFC4-214ENST00000494047 AFF3P51826 1226 aaKnown RBP10.28□□□□□ -0.76
RFC4-214ENST00000494047 ERV3-1Q14264 604 aa10.28□□□□□ -0.76
RFC4-214ENST00000494047 PPA1Q15181 289 aa10.28□□□□□ -0.76
RFC4-214ENST00000494047 NSUN5P2Q63ZY6 315 aa10.28□□□□□ -0.76
RFC4-214ENST00000494047 AWAT2Q6E213 333 aa10.28□□□□□ -0.76
RFC4-214ENST00000494047 OR7E24Q6IFN5 339 aa10.28□□□□□ -0.76
RFC4-214ENST00000494047 TCEAL6Q6IPX3 200 aa10.28□□□□□ -0.76
RFC4-214ENST00000494047 WDR74Q6RFH5 385 aaPredicted RBP10.28□□□□□ -0.76
RFC4-214ENST00000494047 ACOT7LQ6ZUV0 252 aa10.28□□□□□ -0.76
RFC4-214ENST00000494047 ZNF627Q7L945 461 aa10.28□□□□□ -0.76
RFC4-214ENST00000494047 ZSCAN2Q7Z7L9 614 aaPredicted RBP10.28□□□□□ -0.76
RFC4-214ENST00000494047 LYG2Q86SG7 212 aa10.28□□□□□ -0.76
RFC4-214ENST00000494047 SLC25A42Q86VD7 318 aa10.28□□□□□ -0.76
RFC4-214ENST00000494047 BPIFB2Q8N4F0 458 aa10.28□□□□□ -0.76
RFC4-214ENST00000494047 JAGN1Q8N5M9 183 aa10.28□□□□□ -0.76
RFC4-214ENST00000494047 DEFB119Q8N690 84 aa10.28□□□□□ -0.76
RFC4-214ENST00000494047 INO80EQ8NBZ0 244 aaPredicted RBP10.28□□□□□ -0.76
RFC4-214ENST00000494047 THAP6Q8TBB0 222 aa10.28□□□□□ -0.76
RFC4-214ENST00000494047 TCEAL3Q969E4 200 aa10.28□□□□□ -0.76
RFC4-214ENST00000494047 SLC25A36Q96CQ1 311 aa10.28□□□□□ -0.76
RFC4-214ENST00000494047 MS4A3Q96HJ5 214 aa10.28□□□□□ -0.76
RFC4-214ENST00000494047 KCNK17Q96T54 332 aa10.28□□□□□ -0.76
RFC4-214ENST00000494047 PDCD10Q9BUL8 212 aa10.28□□□□□ -0.76
RFC4-214ENST00000494047 SLC6A15Q9H2J7 730 aa10.28□□□□□ -0.76
RFC4-214ENST00000494047 PIGMQ9H3S5 423 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms