RNA–Protein interactions for RNA: ENST00000494028.1

CLCN6-208, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 5

Gene CLCN6, Length 773 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-208ENST00000494028 RIF1Q5UIP0 2472 aaKnown RBP9.42□□□□□ -0.9
CLCN6-208ENST00000494028 TMEM269A0A1B0GVZ9 245 aa9.41□□□□□ -0.9
CLCN6-208ENST00000494028 DHHO43323 396 aa9.41□□□□□ -0.9
CLCN6-208ENST00000494028 WDPCPO95876 746 aa9.41□□□□□ -0.9
CLCN6-208ENST00000494028 ITGA5P08648 1049 aa9.41□□□□□ -0.9
CLCN6-208ENST00000494028 TRAPPC2P0DI81 140 aa9.41□□□□□ -0.9
CLCN6-208ENST00000494028 TRAPPC2BP0DI82 140 aa9.41□□□□□ -0.9
CLCN6-208ENST00000494028 DDOSTP39656 456 aa9.41□□□□□ -0.9
CLCN6-208ENST00000494028 PTH2RP49190 550 aa9.41□□□□□ -0.9
CLCN6-208ENST00000494028 CLDN15P56746 228 aa9.41□□□□□ -0.9
CLCN6-208ENST00000494028 TAS2R20P59543 309 aa9.41□□□□□ -0.9
CLCN6-208ENST00000494028 LSM6P62312 80 aaKnown RBP9.41□□□□□ -0.9
CLCN6-208ENST00000494028 PITPNAQ00169 270 aa9.41□□□□□ -0.9
CLCN6-208ENST00000494028 KLF9Q13886 244 aaPredicted RBP9.41□□□□□ -0.9
CLCN6-208ENST00000494028 RAB11BQ15907 218 aa9.41□□□□□ -0.9
CLCN6-208ENST00000494028 TMEM244Q5VVB8 128 aa9.41□□□□□ -0.9
CLCN6-208ENST00000494028 C20orf196Q8IYI0 205 aa9.41□□□□□ -0.9
CLCN6-208ENST00000494028 UBE2J2Q8N2K1 259 aa9.41□□□□□ -0.9
CLCN6-208ENST00000494028 IL22RA1Q8N6P7 574 aa9.41□□□□□ -0.9
CLCN6-208ENST00000494028 OR8B12Q8NGG6 310 aa9.41□□□□□ -0.9
CLCN6-208ENST00000494028 OR2AJ1Q8NGZ0 328 aa9.41□□□□□ -0.9
CLCN6-208ENST00000494028 RAB40AQ8WXH6 277 aa9.41□□□□□ -0.9
CLCN6-208ENST00000494028 GCDHQ92947 438 aaPredicted RBP9.41□□□□□ -0.9
CLCN6-208ENST00000494028 NKX3-1Q99801 234 aaPredicted RBP9.41□□□□□ -0.9
CLCN6-208ENST00000494028 THAP7Q9BT49 309 aaPredicted RBP9.41□□□□□ -0.9
CLCN6-208ENST00000494028 ZNF416Q9BWM5 594 aa9.41□□□□□ -0.9
CLCN6-208ENST00000494028 ULBP2Q9BZM5 246 aa9.41□□□□□ -0.9
CLCN6-208ENST00000494028 PBOV1Q9GZY1 135 aa9.41□□□□□ -0.9
CLCN6-208ENST00000494028 SLC6A15Q9H2J7 730 aa9.41□□□□□ -0.9
CLCN6-208ENST00000494028 NELFAQ9H3P2 528 aa9.41□□□□□ -0.9
CLCN6-208ENST00000494028 NIPAL2Q9H841 368 aa9.41□□□□□ -0.9
CLCN6-208ENST00000494028 RNF121Q9H920 327 aa9.41□□□□□ -0.9
CLCN6-208ENST00000494028 ASCL3Q9NQ33 180 aa9.41□□□□□ -0.9
CLCN6-208ENST00000494028 B4GALT7Q9UBV7 327 aa9.41□□□□□ -0.9
CLCN6-208ENST00000494028 CACNG2Q9Y698 323 aa9.41□□□□□ -0.9
CLCN6-208ENST00000494028 FAM186AA6NE01 2351 aa9.4□□□□□ -0.9
CLCN6-208ENST00000494028 A0A1B0GTI1 187 aa9.4□□□□□ -0.9
CLCN6-208ENST00000494028 LOC390937A0A1W2PQ73 354 aa9.4□□□□□ -0.9
CLCN6-208ENST00000494028 MEIOCA2RUB1 952 aa9.4□□□□□ -0.9
CLCN6-208ENST00000494028 FAM166BA8MTA8 275 aa9.4□□□□□ -0.9
CLCN6-208ENST00000494028 RER1O15258 196 aa9.4□□□□□ -0.9
CLCN6-208ENST00000494028 NME2P1O60361 137 aa9.4□□□□□ -0.9
CLCN6-208ENST00000494028 HPNP05981 417 aa9.4□□□□□ -0.9
CLCN6-208ENST00000494028 CELA3AP09093 270 aa9.4□□□□□ -0.9
CLCN6-208ENST00000494028 TMIGD3P0DMS9 266 aaPredicted RBP9.4□□□□□ -0.9
CLCN6-208ENST00000494028 CD37P11049 281 aa9.4□□□□□ -0.9
CLCN6-208ENST00000494028 CCL1P22362 96 aa9.4□□□□□ -0.9
CLCN6-208ENST00000494028 NME2P22392 152 aa9.4□□□□□ -0.9
CLCN6-208ENST00000494028 CDK2P24941 298 aa9.4□□□□□ -0.9
CLCN6-208ENST00000494028 HSD11B1P28845 292 aa9.4□□□□□ -0.9
CLCN6-208ENST00000494028 SLC6A1P30531 599 aa9.4□□□□□ -0.9
CLCN6-208ENST00000494028 RFC3P40938 356 aa9.4□□□□□ -0.9
CLCN6-208ENST00000494028 CX3CR1P49238 355 aa9.4□□□□□ -0.9
CLCN6-208ENST00000494028 POU3F4P49335 361 aa9.4□□□□□ -0.9
CLCN6-208ENST00000494028 STARP49675 285 aa9.4□□□□□ -0.9
CLCN6-208ENST00000494028 ZNF121P58317 390 aaPredicted RBP9.4□□□□□ -0.9
CLCN6-208ENST00000494028 GRB2P62993 217 aaKnown RBP9.4□□□□□ -0.9
CLCN6-208ENST00000494028 HIST1H3AP68431 136 aa9.4□□□□□ -0.9
CLCN6-208ENST00000494028 SLC36A2Q495M3 483 aa9.4□□□□□ -0.9
CLCN6-208ENST00000494028 PLA1AQ53H76 456 aa9.4□□□□□ -0.9
CLCN6-208ENST00000494028 HIST2H3PS2Q5TEC6 136 aa9.4□□□□□ -0.9
CLCN6-208ENST00000494028 PLET1Q6UQ28 207 aa9.4□□□□□ -0.9
CLCN6-208ENST00000494028 LINC00696Q6ZRV3 163 aa9.4□□□□□ -0.9
CLCN6-208ENST00000494028 HIST2H3AQ71DI3 136 aa9.4□□□□□ -0.9
CLCN6-208ENST00000494028 LINGO2Q7L985 606 aa9.4□□□□□ -0.9
CLCN6-208ENST00000494028 BIVMQ86UB2 503 aa9.4□□□□□ -0.9
CLCN6-208ENST00000494028 LYPD6Q86Y78 171 aa9.4□□□□□ -0.9
CLCN6-208ENST00000494028 HIST2H2ABQ8IUE6 130 aaPredicted RBP9.4□□□□□ -0.9
CLCN6-208ENST00000494028 NKAIN3Q8N8D7 197 aa9.4□□□□□ -0.9
CLCN6-208ENST00000494028 PLPP7Q8NBV4 271 aa9.4□□□□□ -0.9
CLCN6-208ENST00000494028 DUSP18Q8NEJ0 188 aa9.4□□□□□ -0.9
CLCN6-208ENST00000494028 SLC25A28Q96A46 364 aa9.4□□□□□ -0.9
CLCN6-208ENST00000494028 FER1L6-AS2Q96M78 137 aa9.4□□□□□ -0.9
CLCN6-208ENST00000494028 TTTY12Q9BZ98 90 aa9.4□□□□□ -0.9
CLCN6-208ENST00000494028 PLA2G3Q9NZ20 509 aa9.4□□□□□ -0.9
CLCN6-208ENST00000494028 STMN3Q9NZ72 180 aa9.4□□□□□ -0.9
CLCN6-208ENST00000494028 NLKQ9UBE8 527 aa9.4□□□□□ -0.9
CLCN6-208ENST00000494028 CKLFQ9UBR5 152 aa9.4□□□□□ -0.9
CLCN6-208ENST00000494028 ARHGAP21Q5T5U3 1957 aa9.4□□□□□ -0.9
CLCN6-208ENST00000494028 LOC100289279A0A1B0GTE1 492 aa9.39□□□□□ -0.91
CLCN6-208ENST00000494028 FAM240BA0A1B0GVZ2 78 aa9.39□□□□□ -0.91
CLCN6-208ENST00000494028 OR5H15A6NDH6 313 aa9.39□□□□□ -0.91
CLCN6-208ENST00000494028 GABARAPH6UMI1 98 aa9.39□□□□□ -0.91
CLCN6-208ENST00000494028 CYTIPO60759 359 aa9.39□□□□□ -0.91
CLCN6-208ENST00000494028 TRAPPC6AO75865 159 aa9.39□□□□□ -0.91
CLCN6-208ENST00000494028 GLSO94925 669 aaPredicted RBP9.39□□□□□ -0.91
CLCN6-208ENST00000494028 KDM4BO94953 1096 aa9.39□□□□□ -0.91
CLCN6-208ENST00000494028 IGLV3-1P01715 115 aa9.39□□□□□ -0.91
CLCN6-208ENST00000494028 GDNFP39905 211 aa9.39□□□□□ -0.91
CLCN6-208ENST00000494028 SRP9P49458 86 aaKnown RBP9.39□□□□□ -0.91
CLCN6-208ENST00000494028 EIF2B2P49770 351 aaKnown RBP9.39□□□□□ -0.91
CLCN6-208ENST00000494028 MEOX1P50221 254 aa9.39□□□□□ -0.91
CLCN6-208ENST00000494028 LHX2P50458 406 aa9.39□□□□□ -0.91
CLCN6-208ENST00000494028 ZNF84P51523 738 aa9.39□□□□□ -0.91
CLCN6-208ENST00000494028 PRKXP51817 358 aa9.39□□□□□ -0.91
CLCN6-208ENST00000494028 EFNB2P52799 333 aa9.39□□□□□ -0.91
CLCN6-208ENST00000494028 ART1P52961 327 aa9.39□□□□□ -0.91
CLCN6-208ENST00000494028 CARD18P57730 90 aa9.39□□□□□ -0.91
CLCN6-208ENST00000494028 MRPS34P82930 218 aaKnown RBP9.39□□□□□ -0.91
CLCN6-208ENST00000494028 TGIF1Q15583 401 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms