RNA–Protein interactions for RNA: ENST00000493618.5

ATG4B-223, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 899 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-223ENST00000493618 SLC6A6P31641 620 aa12.35□□□□□ -0.43
ATG4B-223ENST00000493618 GYS2P54840 703 aa12.35□□□□□ -0.43
ATG4B-223ENST00000493618 SEC61A1P61619 476 aaKnown RBP12.35□□□□□ -0.43
ATG4B-223ENST00000493618 SCGB2A2Q13296 93 aa12.35□□□□□ -0.43
ATG4B-223ENST00000493618 KCNMB1Q16558 191 aa12.35□□□□□ -0.43
ATG4B-223ENST00000493618 RFX4Q33E94 735 aa12.35□□□□□ -0.43
ATG4B-223ENST00000493618 CPLX4Q7Z7G2 160 aa12.35□□□□□ -0.43
ATG4B-223ENST00000493618 LINC00346Q8IVM7 164 aa12.35□□□□□ -0.43
ATG4B-223ENST00000493618 OR6V1Q8N148 313 aa12.35□□□□□ -0.43
ATG4B-223ENST00000493618 ATG16L2Q8NAA4 619 aa12.35□□□□□ -0.43
ATG4B-223ENST00000493618 OR10AD1Q8NGE0 317 aa12.35□□□□□ -0.43
ATG4B-223ENST00000493618 C22orf15Q8WYQ4 148 aa12.35□□□□□ -0.43
ATG4B-223ENST00000493618 OR2V2Q96R30 315 aa12.35□□□□□ -0.43
ATG4B-223ENST00000493618 CDRT15Q96T59 188 aa12.35□□□□□ -0.43
ATG4B-223ENST00000493618 IFT27Q9BW83 186 aa12.35□□□□□ -0.43
ATG4B-223ENST00000493618 NSRP1Q9H0G5 558 aaKnown RBP12.35□□□□□ -0.43
ATG4B-223ENST00000493618 WDR76Q9H967 626 aa12.35□□□□□ -0.43
ATG4B-223ENST00000493618 RPRD1BQ9NQG5 326 aaKnown RBP12.35□□□□□ -0.43
ATG4B-223ENST00000493618 ARL8BQ9NVJ2 186 aa12.35□□□□□ -0.43
ATG4B-223ENST00000493618 OPN4Q9UHM6 478 aa12.35□□□□□ -0.43
ATG4B-223ENST00000493618 MAGEL2Q9UJ55 1249 aa12.35□□□□□ -0.43
ATG4B-223ENST00000493618 A0A0A6YYJ9 748 aa12.34□□□□□ -0.43
ATG4B-223ENST00000493618 J3QLI3 93 aa12.34□□□□□ -0.43
ATG4B-223ENST00000493618 ARPC2O15144 300 aa12.34□□□□□ -0.43
ATG4B-223ENST00000493618 ZNF205O95201 554 aa12.34□□□□□ -0.43
ATG4B-223ENST00000493618 RENP00797 406 aa12.34□□□□□ -0.43
ATG4B-223ENST00000493618 FABP3P05413 133 aa12.34□□□□□ -0.43
ATG4B-223ENST00000493618 HIST1H1CP16403 213 aaKnown RBP12.34□□□□□ -0.43
ATG4B-223ENST00000493618 TNFRSF1AP19438 455 aa12.34□□□□□ -0.43
ATG4B-223ENST00000493618 TUBG1P23258 451 aa12.34□□□□□ -0.43
ATG4B-223ENST00000493618 CRABP1P29762 137 aa12.34□□□□□ -0.43
ATG4B-223ENST00000493618 RRM2P31350 389 aa12.34□□□□□ -0.43
ATG4B-223ENST00000493618 ACTG1P63261 375 aa12.34□□□□□ -0.43
ATG4B-223ENST00000493618 HIST1H3AP68431 136 aa12.34□□□□□ -0.43
ATG4B-223ENST00000493618 ZMYND11Q15326 602 aa12.34□□□□□ -0.43
ATG4B-223ENST00000493618 HIST2H3PS2Q5TEC6 136 aa12.34□□□□□ -0.43
ATG4B-223ENST00000493618 DNM1P34Q6PK57 102 aa12.34□□□□□ -0.43
ATG4B-223ENST00000493618 C12orf54Q6X4T0 127 aa12.34□□□□□ -0.43
ATG4B-223ENST00000493618 CFAP77Q6ZQR2 320 aa12.34□□□□□ -0.43
ATG4B-223ENST00000493618 HIST2H3AQ71DI3 136 aa12.34□□□□□ -0.43
ATG4B-223ENST00000493618 ZNF283Q8N7M2 679 aa12.34□□□□□ -0.43
ATG4B-223ENST00000493618 BHLHE23Q8NDY6 225 aa12.34□□□□□ -0.43
ATG4B-223ENST00000493618 SDR9C7Q8NEX9 313 aa12.34□□□□□ -0.43
ATG4B-223ENST00000493618 GJC3Q8NFK1 279 aa12.34□□□□□ -0.43
ATG4B-223ENST00000493618 ZNF420Q8TAQ5 688 aaPredicted RBP12.34□□□□□ -0.43
ATG4B-223ENST00000493618 NANPQ8TBE9 248 aa12.34□□□□□ -0.43
ATG4B-223ENST00000493618 MCUR1Q96AQ8 359 aa12.34□□□□□ -0.43
ATG4B-223ENST00000493618 NSMCE2Q96MF7 247 aa12.34□□□□□ -0.43
ATG4B-223ENST00000493618 SIGLEC11Q96RL6 698 aa12.34□□□□□ -0.43
ATG4B-223ENST00000493618 MMP26Q9NRE1 261 aa12.34□□□□□ -0.43
ATG4B-223ENST00000493618 TUBG2Q9NRH3 451 aa12.34□□□□□ -0.43
ATG4B-223ENST00000493618 IL19Q9UHD0 177 aa12.34□□□□□ -0.43
ATG4B-223ENST00000493618 PPP1R3CQ9UQK1 317 aa12.34□□□□□ -0.43
ATG4B-223ENST00000493618 FOXH1O75593 365 aa12.33□□□□□ -0.44
ATG4B-223ENST00000493618 HLA-DQA2P01906 255 aa12.33□□□□□ -0.44
ATG4B-223ENST00000493618 HSD17B1P14061 328 aa12.33□□□□□ -0.44
ATG4B-223ENST00000493618 RAC2P15153 192 aa12.33□□□□□ -0.44
ATG4B-223ENST00000493618 RGS6P49758 472 aa12.33□□□□□ -0.44
ATG4B-223ENST00000493618 MMP16P51512 607 aa12.33□□□□□ -0.44
ATG4B-223ENST00000493618 SMIM11AP58511 58 aa12.33□□□□□ -0.44
ATG4B-223ENST00000493618 BTG1P62324 171 aa12.33□□□□□ -0.44
ATG4B-223ENST00000493618 SAMD4BQ5PRF9 694 aaKnown RBP12.33□□□□□ -0.44
ATG4B-223ENST00000493618 SLC35F1Q5T1Q4 408 aa12.33□□□□□ -0.44
ATG4B-223ENST00000493618 NAA40Q86UY6 237 aa12.33□□□□□ -0.44
ATG4B-223ENST00000493618 PGAM4Q8N0Y7 254 aa12.33□□□□□ -0.44
ATG4B-223ENST00000493618 BPIFB2Q8N4F0 458 aa12.33□□□□□ -0.44
ATG4B-223ENST00000493618 TEX29Q8N6K0 151 aa12.33□□□□□ -0.44
ATG4B-223ENST00000493618 SLC26A10Q8NG04 563 aa12.33□□□□□ -0.44
ATG4B-223ENST00000493618 OR5L1Q8NGL2 311 aa12.33□□□□□ -0.44
ATG4B-223ENST00000493618 COG8Q96MW5 612 aa12.33□□□□□ -0.44
ATG4B-223ENST00000493618 COQ7Q99807 217 aa12.33□□□□□ -0.44
ATG4B-223ENST00000493618 EGLN3Q9H6Z9 239 aa12.33□□□□□ -0.44
ATG4B-223ENST00000493618 PATZ1Q9HBE1 687 aaKnown RBP12.33□□□□□ -0.44
ATG4B-223ENST00000493618 GCM1Q9NP62 436 aa12.33□□□□□ -0.44
ATG4B-223ENST00000493618 CD300AQ9UGN4 299 aa12.33□□□□□ -0.44
ATG4B-223ENST00000493618 TAGLN3Q9UI15 199 aa12.33□□□□□ -0.44
ATG4B-223ENST00000493618 TMCC3Q9ULS5 477 aa12.33□□□□□ -0.44
ATG4B-223ENST00000493618 OR6C68A6NDL8 312 aa12.32□□□□□ -0.44
ATG4B-223ENST00000493618 F5H5K5 113 aa12.32□□□□□ -0.44
ATG4B-223ENST00000493618 F5H5P2 479 aa12.32□□□□□ -0.44
ATG4B-223ENST00000493618 TRAPPC2LH3BP13 241 aa12.32□□□□□ -0.44
ATG4B-223ENST00000493618 MLNRO43193 412 aa12.32□□□□□ -0.44
ATG4B-223ENST00000493618 CYB5R3P00387 301 aaPredicted RBP12.32□□□□□ -0.44
ATG4B-223ENST00000493618 FPR3P25089 353 aa12.32□□□□□ -0.44
ATG4B-223ENST00000493618 NOS3P29474 1203 aa12.32□□□□□ -0.44
ATG4B-223ENST00000493618 HILS1P60008 231 aa12.32□□□□□ -0.44
ATG4B-223ENST00000493618 GNGT1P63211 74 aa12.32□□□□□ -0.44
ATG4B-223ENST00000493618 MXRA7P84157 204 aa12.32□□□□□ -0.44
ATG4B-223ENST00000493618 KHDRBS1Q07666 443 aaKnown RBP eCLIP12.32□□□□□ -0.44
ATG4B-223ENST00000493618 COX10Q12887 443 aa12.32□□□□□ -0.44
ATG4B-223ENST00000493618 RSPO1Q2MKA7 263 aaPredicted RBP12.32□□□□□ -0.44
ATG4B-223ENST00000493618 CLEC12AQ5QGZ9 265 aa12.32□□□□□ -0.44
ATG4B-223ENST00000493618 SLC18B1Q6NT16 456 aa12.32□□□□□ -0.44
ATG4B-223ENST00000493618 PGM2L1Q6PCE3 622 aa12.32□□□□□ -0.44
ATG4B-223ENST00000493618 FBXW12Q6X9E4 464 aa12.32□□□□□ -0.44
ATG4B-223ENST00000493618 LRRC28Q86X40 367 aaPredicted RBP12.32□□□□□ -0.44
ATG4B-223ENST00000493618 ZDHHC21Q8IVQ6 265 aa12.32□□□□□ -0.44
ATG4B-223ENST00000493618 KLHL36Q8N4N3 616 aa12.32□□□□□ -0.44
ATG4B-223ENST00000493618 SPICQ8N5J4 248 aa12.32□□□□□ -0.44
ATG4B-223ENST00000493618 OR8G5Q8NG78 346 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms