RNA–Protein interactions for RNA: ENST00000493208.1

IRF1-210, Transcript of interferon regulatory factor 1, humanhuman

TSL 1 (best)

Gene IRF1, Length 1,023 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF1-210ENST00000493208 FAM107AO95990 144 aa11.56□□□□□ -0.56
IRF1-210ENST00000493208 SEMG1P04279 462 aa11.56□□□□□ -0.56
IRF1-210ENST00000493208 IRF2P14316 349 aa11.56□□□□□ -0.56
IRF1-210ENST00000493208 IL2RGP31785 369 aa11.56□□□□□ -0.56
IRF1-210ENST00000493208 MPV17P39210 176 aa11.56□□□□□ -0.56
IRF1-210ENST00000493208 TPTEP56180 551 aa11.56□□□□□ -0.56
IRF1-210ENST00000493208 MZT1Q08AG7 82 aa11.56□□□□□ -0.56
IRF1-210ENST00000493208 COX10Q12887 443 aa11.56□□□□□ -0.56
IRF1-210ENST00000493208 PSG7Q13046 419 aa11.56□□□□□ -0.56
IRF1-210ENST00000493208 CDK5R2Q13319 367 aa11.56□□□□□ -0.56
IRF1-210ENST00000493208 THSD4Q6ZMP0 1018 aa11.56□□□□□ -0.56
IRF1-210ENST00000493208 ZNF620Q6ZNG0 422 aa11.56□□□□□ -0.56
IRF1-210ENST00000493208 C1orf87Q8N0U7 546 aa11.56□□□□□ -0.56
IRF1-210ENST00000493208 ATG16L2Q8NAA4 619 aa11.56□□□□□ -0.56
IRF1-210ENST00000493208 PROKR2Q8NFJ6 384 aa11.56□□□□□ -0.56
IRF1-210ENST00000493208 OR2Z1Q8NG97 314 aa11.56□□□□□ -0.56
IRF1-210ENST00000493208 OR4K13Q8NH42 304 aa11.56□□□□□ -0.56
IRF1-210ENST00000493208 CCT8L2Q96SF2 557 aa11.56□□□□□ -0.56
IRF1-210ENST00000493208 NMNAT3Q96T66 252 aa11.56□□□□□ -0.56
IRF1-210ENST00000493208 SLC22A4Q9H015 551 aa11.56□□□□□ -0.56
IRF1-210ENST00000493208 SP140LQ9H930 580 aa11.56□□□□□ -0.56
IRF1-210ENST00000493208 SRA1Q9HD15 236 aaKnown RBP11.56□□□□□ -0.56
IRF1-210ENST00000493208 RPRD1BQ9NQG5 326 aaKnown RBP11.56□□□□□ -0.56
IRF1-210ENST00000493208 ARL8BQ9NVJ2 186 aa11.56□□□□□ -0.56
IRF1-210ENST00000493208 KLHL21Q9UJP4 597 aa11.56□□□□□ -0.56
IRF1-210ENST00000493208 B9D1Q9UPM9 204 aa11.56□□□□□ -0.56
IRF1-210ENST00000493208 PPP1R3CQ9UQK1 317 aa11.56□□□□□ -0.56
IRF1-210ENST00000493208 NGFP01138 241 aa11.55□□□□□ -0.56
IRF1-210ENST00000493208 CDKN2AP42771 156 aaKnown RBP11.55□□□□□ -0.56
IRF1-210ENST00000493208 GSSP48637 474 aa11.55□□□□□ -0.56
IRF1-210ENST00000493208 HMGA2P52926 109 aa11.55□□□□□ -0.56
IRF1-210ENST00000493208 TRIM25Q14258 630 aaKnown RBP11.55□□□□□ -0.56
IRF1-210ENST00000493208 TAF13Q15543 124 aa11.55□□□□□ -0.56
IRF1-210ENST00000493208 AVPI1Q5T686 147 aa11.55□□□□□ -0.56
IRF1-210ENST00000493208 DCAF12L2Q5VW00 463 aa11.55□□□□□ -0.56
IRF1-210ENST00000493208 FBXW12Q6X9E4 464 aa11.55□□□□□ -0.56
IRF1-210ENST00000493208 IL17RELQ6ZVW7 336 aa11.55□□□□□ -0.56
IRF1-210ENST00000493208 TSEN54Q7Z6J9 526 aaKnown RBP11.55□□□□□ -0.56
IRF1-210ENST00000493208 ZSCAN2Q7Z7L9 614 aaPredicted RBP11.55□□□□□ -0.56
IRF1-210ENST00000493208 ZBTB46Q86UZ6 589 aa11.55□□□□□ -0.56
IRF1-210ENST00000493208 FAM86B1Q8N7N1 296 aa11.55□□□□□ -0.56
IRF1-210ENST00000493208 OR52E2Q8NGJ4 325 aa11.55□□□□□ -0.56
IRF1-210ENST00000493208 ATF6BQ99941 703 aa11.55□□□□□ -0.56
IRF1-210ENST00000493208 FUZQ9BT04 418 aa11.55□□□□□ -0.56
IRF1-210ENST00000493208 OCEL1Q9H607 264 aa11.55□□□□□ -0.56
IRF1-210ENST00000493208 OPA3Q9H6K4 179 aa11.55□□□□□ -0.56
IRF1-210ENST00000493208 LPAR2Q9HBW0 351 aa11.55□□□□□ -0.56
IRF1-210ENST00000493208 MSL2Q9HCI7 577 aa11.55□□□□□ -0.56
IRF1-210ENST00000493208 TBC1D23Q9NUY8 699 aa11.55□□□□□ -0.56
IRF1-210ENST00000493208 NPTNQ9Y639 398 aa11.55□□□□□ -0.56
IRF1-210ENST00000493208 ATRQ13535 2644 aa11.54□□□□□ -0.56
IRF1-210ENST00000493208 ZSCAN5BA6NJL1 495 aa11.54□□□□□ -0.56
IRF1-210ENST00000493208 DYNC1I1O14576 645 aa11.54□□□□□ -0.56
IRF1-210ENST00000493208 GNGT2O14610 69 aa11.54□□□□□ -0.56
IRF1-210ENST00000493208 RER1O15258 196 aa11.54□□□□□ -0.56
IRF1-210ENST00000493208 APOC1P02654 83 aa11.54□□□□□ -0.56
IRF1-210ENST00000493208 HIST1H1CP16403 213 aaKnown RBP11.54□□□□□ -0.56
IRF1-210ENST00000493208 ZNF26P17031 533 aaPredicted RBP11.54□□□□□ -0.56
IRF1-210ENST00000493208 ZNF3P17036 446 aa11.54□□□□□ -0.56
IRF1-210ENST00000493208 PAICSP22234 425 aaKnown RBP11.54□□□□□ -0.56
IRF1-210ENST00000493208 SLC15A1P46059 708 aa11.54□□□□□ -0.56
IRF1-210ENST00000493208 KHDRBS1Q07666 443 aaKnown RBP eCLIP11.54□□□□□ -0.56
IRF1-210ENST00000493208 TMEM155Q4W5P6 130 aa11.54□□□□□ -0.56
IRF1-210ENST00000493208 LCN8Q6JVE9 175 aa11.54□□□□□ -0.56
IRF1-210ENST00000493208 CYP2R1Q6VVX0 501 aa11.54□□□□□ -0.56
IRF1-210ENST00000493208 RASSF6Q6ZTQ3 369 aa11.54□□□□□ -0.56
IRF1-210ENST00000493208 PTCHD4Q6ZW05 846 aa11.54□□□□□ -0.56
IRF1-210ENST00000493208 OR2T33Q8NG76 320 aa11.54□□□□□ -0.56
IRF1-210ENST00000493208 NANPQ8TBE9 248 aa11.54□□□□□ -0.56
IRF1-210ENST00000493208 ZFAND2BQ8WV99 257 aa11.54□□□□□ -0.56
IRF1-210ENST00000493208 ERGIC1Q969X5 290 aa11.54□□□□□ -0.56
IRF1-210ENST00000493208 ASB9Q96DX5 294 aa11.54□□□□□ -0.56
IRF1-210ENST00000493208 C1orf21Q9H246 121 aa11.54□□□□□ -0.56
IRF1-210ENST00000493208 METTL17Q9H7H0 456 aaPredicted RBP11.54□□□□□ -0.56
IRF1-210ENST00000493208 TMEM106BQ9NUM4 274 aa11.54□□□□□ -0.56
IRF1-210ENST00000493208 UBAP1Q9NZ09 502 aa11.54□□□□□ -0.56
IRF1-210ENST00000493208 SAMHD1Q9Y3Z3 626 aaKnown RBP11.54□□□□□ -0.56
IRF1-210ENST00000493208 LYVE1Q9Y5Y7 322 aa11.54□□□□□ -0.56
IRF1-210ENST00000493208 RTTNQ86VV8 2226 aa11.54□□□□□ -0.56
IRF1-210ENST00000493208 IGLV1-36A0A0B4J1U3 117 aa11.53□□□□□ -0.56
IRF1-210ENST00000493208 RIIAD1A6NNX1 92 aa11.53□□□□□ -0.56
IRF1-210ENST00000493208 UBOX5O94941 541 aa11.53□□□□□ -0.56
IRF1-210ENST00000493208 IGHV2-5P01817 119 aa11.53□□□□□ -0.56
IRF1-210ENST00000493208 RAP2AP10114 183 aa11.53□□□□□ -0.56
IRF1-210ENST00000493208 FPR2P25090 351 aa11.53□□□□□ -0.56
IRF1-210ENST00000493208 FMO3P31513 532 aa11.53□□□□□ -0.56
IRF1-210ENST00000493208 MSX2P35548 267 aaPredicted RBP11.53□□□□□ -0.56
IRF1-210ENST00000493208 MDH2P40926 338 aaKnown RBP11.53□□□□□ -0.56
IRF1-210ENST00000493208 SLC6A9P48067 706 aa11.53□□□□□ -0.56
IRF1-210ENST00000493208 LMO4P61968 165 aa11.53□□□□□ -0.56
IRF1-210ENST00000493208 KCNJ8Q15842 424 aa11.53□□□□□ -0.56
IRF1-210ENST00000493208 SNCBQ16143 134 aa11.53□□□□□ -0.56
IRF1-210ENST00000493208 DNAL1Q4LDG9 190 aa11.53□□□□□ -0.56
IRF1-210ENST00000493208 CCDC92Q53HC0 331 aaPredicted RBP11.53□□□□□ -0.56
IRF1-210ENST00000493208 CLEC12AQ5QGZ9 265 aa11.53□□□□□ -0.56
IRF1-210ENST00000493208 OR2T5Q6IEZ7 315 aa11.53□□□□□ -0.56
IRF1-210ENST00000493208 PGBD2Q6P3X8 592 aa11.53□□□□□ -0.56
IRF1-210ENST00000493208 MRPL21Q7Z2W9 205 aaKnown RBP11.53□□□□□ -0.56
IRF1-210ENST00000493208 OR6V1Q8N148 313 aa11.53□□□□□ -0.56
IRF1-210ENST00000493208 SDR9C7Q8NEX9 313 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 74.4 ms