RNA–Protein interactions for RNA: ENST00000492909.1

PDZRN3-210, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 1 (best)

Gene PDZRN3, Length 1,776 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-210ENST00000492909 C1orf198Q9H425 327 aa12.39□□□□□ -0.43
PDZRN3-210ENST00000492909 SLCO1C1Q9NYB5 712 aa12.39□□□□□ -0.43
PDZRN3-210ENST00000492909 GRIP1Q9Y3R0 1128 aa12.39□□□□□ -0.43
PDZRN3-210ENST00000492909 FAM208BQ5VWN6 2430 aa12.38□□□□□ -0.43
PDZRN3-210ENST00000492909 HSPB2A8KAH6 182 aa12.38□□□□□ -0.43
PDZRN3-210ENST00000492909 E9PI62 339 aa12.38□□□□□ -0.43
PDZRN3-210ENST00000492909 PRRG2O14669 202 aa12.38□□□□□ -0.43
PDZRN3-210ENST00000492909 OR3A2P47893 321 aa12.38□□□□□ -0.43
PDZRN3-210ENST00000492909 PER3P56645 1201 aa12.38□□□□□ -0.43
PDZRN3-210ENST00000492909 RPS25P62851 125 aaKnown RBP12.38□□□□□ -0.43
PDZRN3-210ENST00000492909 SIRPAP78324 504 aa12.38□□□□□ -0.43
PDZRN3-210ENST00000492909 MRPL28Q13084 256 aaKnown RBP12.38□□□□□ -0.43
PDZRN3-210ENST00000492909 GPR50Q13585 617 aa12.38□□□□□ -0.43
PDZRN3-210ENST00000492909 ZNF79Q15937 498 aa12.38□□□□□ -0.43
PDZRN3-210ENST00000492909 HSPB2Q16082 182 aa12.38□□□□□ -0.43
PDZRN3-210ENST00000492909 CARTPTQ16568 116 aa12.38□□□□□ -0.43
PDZRN3-210ENST00000492909 C1orf185Q5T7R7 199 aa12.38□□□□□ -0.43
PDZRN3-210ENST00000492909 C22orf42Q6IC83 251 aa12.38□□□□□ -0.43
PDZRN3-210ENST00000492909 RTL6Q6ICC9 239 aa12.38□□□□□ -0.43
PDZRN3-210ENST00000492909 LRRN1Q6UXK5 716 aa12.38□□□□□ -0.43
PDZRN3-210ENST00000492909 SPATC1Q76KD6 591 aa12.38□□□□□ -0.43
PDZRN3-210ENST00000492909 ABHD12BQ7Z5M8 362 aaPredicted RBP12.38□□□□□ -0.43
PDZRN3-210ENST00000492909 ZNF843Q8N446 348 aa12.38□□□□□ -0.43
PDZRN3-210ENST00000492909 KCTD7Q96MP8 289 aa12.38□□□□□ -0.43
PDZRN3-210ENST00000492909 TP63Q9H3D4 680 aaPredicted RBP12.38□□□□□ -0.43
PDZRN3-210ENST00000492909 ASH2LQ9UBL3 628 aa12.38□□□□□ -0.43
PDZRN3-210ENST00000492909 MALT1Q9UDY8 824 aa12.38□□□□□ -0.43
PDZRN3-210ENST00000492909 PLEKHB1Q9UF11 243 aaPredicted RBP12.38□□□□□ -0.43
PDZRN3-210ENST00000492909 FAM215AQ9Y5M1 114 aa12.38□□□□□ -0.43
PDZRN3-210ENST00000492909 SSX4O60224 188 aa12.38□□□□□ -0.43
PDZRN3-210ENST00000492909 ABHD16AO95870 558 aa12.38□□□□□ -0.43
PDZRN3-210ENST00000492909 CLEC2LP0C7M8 214 aa12.38□□□□□ -0.43
PDZRN3-210ENST00000492909 B4GALT1P15291 398 aa12.38□□□□□ -0.43
PDZRN3-210ENST00000492909 MXD1Q05195 221 aa12.38□□□□□ -0.43
PDZRN3-210ENST00000492909 FAPQ12884 760 aa12.38□□□□□ -0.43
PDZRN3-210ENST00000492909 HNRNPA0Q13151 305 aaKnown RBP12.38□□□□□ -0.43
PDZRN3-210ENST00000492909 ENDOGQ14249 297 aaKnown RBP12.38□□□□□ -0.43
PDZRN3-210ENST00000492909 NRN1LQ496H8 165 aa12.38□□□□□ -0.43
PDZRN3-210ENST00000492909 CCDC58Q4VC31 144 aa12.38□□□□□ -0.43
PDZRN3-210ENST00000492909 AGAP6Q5VW22 663 aa12.38□□□□□ -0.43
PDZRN3-210ENST00000492909 LIPNQ5VXI9 398 aa12.38□□□□□ -0.43
PDZRN3-210ENST00000492909 FBXW9Q5XUX1 488 aa12.38□□□□□ -0.43
PDZRN3-210ENST00000492909 LRRC18Q8N456 261 aa12.38□□□□□ -0.43
PDZRN3-210ENST00000492909 CNEP1R1Q8N9A8 125 aa12.38□□□□□ -0.43
PDZRN3-210ENST00000492909 RNF133Q8WVZ7 376 aa12.38□□□□□ -0.43
PDZRN3-210ENST00000492909 MAP6Q96JE9 813 aa12.38□□□□□ -0.43
PDZRN3-210ENST00000492909 MIXL1Q9H2W2 232 aa12.38□□□□□ -0.43
PDZRN3-210ENST00000492909 ELOVL3Q9HB03 270 aa12.38□□□□□ -0.43
PDZRN3-210ENST00000492909 GDF2Q9UK05 429 aaPredicted RBP12.38□□□□□ -0.43
PDZRN3-210ENST00000492909 SPTA1P02549 2419 aa12.38□□□□□ -0.43
PDZRN3-210ENST00000492909 INTS1Q8N201 2190 aaKnown RBP12.38□□□□□ -0.43
PDZRN3-210ENST00000492909 PLPP2O43688 288 aa12.37□□□□□ -0.43
PDZRN3-210ENST00000492909 ZNF254O75437 659 aa12.37□□□□□ -0.43
PDZRN3-210ENST00000492909 RPP14O95059 124 aaKnown RBP12.37□□□□□ -0.43
PDZRN3-210ENST00000492909 IL7P13232 177 aa12.37□□□□□ -0.43
PDZRN3-210ENST00000492909 EDN3P14138 238 aa12.37□□□□□ -0.43
PDZRN3-210ENST00000492909 FGF9P31371 208 aaPredicted RBP12.37□□□□□ -0.43
PDZRN3-210ENST00000492909 GABRA5P31644 462 aa12.37□□□□□ -0.43
PDZRN3-210ENST00000492909 PSMB10P40306 273 aa12.37□□□□□ -0.43
PDZRN3-210ENST00000492909 KIR2DL2P43627 348 aaPredicted RBP12.37□□□□□ -0.43
PDZRN3-210ENST00000492909 TGM4P49221 684 aa12.37□□□□□ -0.43
PDZRN3-210ENST00000492909 RIDAP52758 137 aaKnown RBP12.37□□□□□ -0.43
PDZRN3-210ENST00000492909 RBPJQ06330 500 aa12.37□□□□□ -0.43
PDZRN3-210ENST00000492909 EIF2S3LQ2VIR3 472 aaKnown RBP12.37□□□□□ -0.43
PDZRN3-210ENST00000492909 ZMAT1Q5H9K5 638 aa12.37□□□□□ -0.43
PDZRN3-210ENST00000492909 RPL22L1Q6P5R6 122 aaKnown RBP12.37□□□□□ -0.43
PDZRN3-210ENST00000492909 XKRXQ6PP77 449 aa12.37□□□□□ -0.43
PDZRN3-210ENST00000492909 CD200R1LQ6Q8B3 271 aa12.37□□□□□ -0.43
PDZRN3-210ENST00000492909 DEGS2Q6QHC5 323 aa12.37□□□□□ -0.43
PDZRN3-210ENST00000492909 ZNF813Q6ZN06 617 aa12.37□□□□□ -0.43
PDZRN3-210ENST00000492909 CFAP77Q6ZQR2 320 aa12.37□□□□□ -0.43
PDZRN3-210ENST00000492909 SEM1Q6ZVN7 128 aa12.37□□□□□ -0.43
PDZRN3-210ENST00000492909 SLC22A24Q8N4F4 322 aa12.37□□□□□ -0.43
PDZRN3-210ENST00000492909 OR6K3Q8NGY3 331 aa12.37□□□□□ -0.43
PDZRN3-210ENST00000492909 TMEM203Q969S6 136 aa12.37□□□□□ -0.43
PDZRN3-210ENST00000492909 SLAMF6Q96DU3 332 aa12.37□□□□□ -0.43
PDZRN3-210ENST00000492909 ABCB9Q9NP78 766 aa12.37□□□□□ -0.43
PDZRN3-210ENST00000492909 CENPMQ9NSP4 180 aa12.37□□□□□ -0.43
PDZRN3-210ENST00000492909 PRSS50Q9UI38 385 aa12.37□□□□□ -0.43
PDZRN3-210ENST00000492909 ST6GALNAC2Q9UJ37 374 aa12.37□□□□□ -0.43
PDZRN3-210ENST00000492909 SIRT4Q9Y6E7 314 aaPredicted RBP12.37□□□□□ -0.43
PDZRN3-210ENST00000492909 TRDV1A0A1B0GX56 115 aa12.36□□□□□ -0.43
PDZRN3-210ENST00000492909 RER1O15258 196 aa12.36□□□□□ -0.43
PDZRN3-210ENST00000492909 OGG1O15527 345 aa12.36□□□□□ -0.43
PDZRN3-210ENST00000492909 SLC19A2O60779 497 aa12.36□□□□□ -0.43
PDZRN3-210ENST00000492909 FARS2O95363 451 aaKnown RBP12.36□□□□□ -0.43
PDZRN3-210ENST00000492909 WNT11O96014 354 aa12.36□□□□□ -0.43
PDZRN3-210ENST00000492909 IL2RAP01589 272 aa12.36□□□□□ -0.43
PDZRN3-210ENST00000492909 CRHP06850 196 aa12.36□□□□□ -0.43
PDZRN3-210ENST00000492909 CST2P09228 141 aa12.36□□□□□ -0.43
PDZRN3-210ENST00000492909 TIMP3P35625 211 aa12.36□□□□□ -0.43
PDZRN3-210ENST00000492909 ARF1P84077 181 aaKnown RBP12.36□□□□□ -0.43
PDZRN3-210ENST00000492909 CDK5R1Q15078 307 aa12.36□□□□□ -0.43
PDZRN3-210ENST00000492909 BAK1Q16611 211 aa12.36□□□□□ -0.43
PDZRN3-210ENST00000492909 DMKNQ6E0U4 476 aaPredicted RBP12.36□□□□□ -0.43
PDZRN3-210ENST00000492909 OR7E24Q6IFN5 339 aa12.36□□□□□ -0.43
PDZRN3-210ENST00000492909 ZNF544Q6NX49 715 aa12.36□□□□□ -0.43
PDZRN3-210ENST00000492909 ARL9Q6T311 187 aa12.36□□□□□ -0.43
PDZRN3-210ENST00000492909 TFAP2EQ6VUC0 442 aa12.36□□□□□ -0.43
PDZRN3-210ENST00000492909 RHOUQ7L0Q8 258 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms