RNA–Protein interactions for RNA: ENST00000492796.5

CDC42SE1-206, Transcript of CDC42 small effector 1, humanhuman

TSL 2

Gene CDC42SE1, Length 1,174 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-206ENST00000492796 PITX2Q99697 317 aa9.12□□□□□ -0.95
CDC42SE1-206ENST00000492796 ATF6BQ99941 703 aa9.12□□□□□ -0.95
CDC42SE1-206ENST00000492796 PRRG3Q9BZD7 231 aa9.12□□□□□ -0.95
CDC42SE1-206ENST00000492796 GSX1Q9H4S2 264 aaPredicted RBP9.12□□□□□ -0.95
CDC42SE1-206ENST00000492796 OCEL1Q9H607 264 aa9.12□□□□□ -0.95
CDC42SE1-206ENST00000492796 HINT3Q9NQE9 182 aaKnown RBP9.12□□□□□ -0.95
CDC42SE1-206ENST00000492796 CYSLTR2Q9NS75 346 aa9.12□□□□□ -0.95
CDC42SE1-206ENST00000492796 NKIRAS2Q9NYR9 191 aa9.12□□□□□ -0.95
CDC42SE1-206ENST00000492796 ENOPH1Q9UHY7 261 aa9.12□□□□□ -0.95
CDC42SE1-206ENST00000492796 GRIP1Q9Y3R0 1128 aa9.12□□□□□ -0.95
CDC42SE1-206ENST00000492796 CR1P17927 2039 aa9.12□□□□□ -0.95
CDC42SE1-206ENST00000492796 CHD3Q12873 2000 aaKnown RBP9.12□□□□□ -0.95
CDC42SE1-206ENST00000492796 PLSCR5A0PG75 271 aa9.11□□□□□ -0.95
CDC42SE1-206ENST00000492796 TVP23AA6NH52 213 aa9.11□□□□□ -0.95
CDC42SE1-206ENST00000492796 PRR23D1E9PI22 279 aaPredicted RBP9.11□□□□□ -0.95
CDC42SE1-206ENST00000492796 PRODHO43272 600 aa9.11□□□□□ -0.95
CDC42SE1-206ENST00000492796 GYPBP06028 91 aa9.11□□□□□ -0.95
CDC42SE1-206ENST00000492796 PRR23D2P0DMB1 279 aaPredicted RBP9.11□□□□□ -0.95
CDC42SE1-206ENST00000492796 NAT2P11245 290 aa9.11□□□□□ -0.95
CDC42SE1-206ENST00000492796 ZNF23P17027 643 aa9.11□□□□□ -0.95
CDC42SE1-206ENST00000492796 GIFP27352 417 aa9.11□□□□□ -0.95
CDC42SE1-206ENST00000492796 MPV17P39210 176 aa9.11□□□□□ -0.95
CDC42SE1-206ENST00000492796 ENTPD1P49961 510 aa9.11□□□□□ -0.95
CDC42SE1-206ENST00000492796 DAPP51397 102 aa9.11□□□□□ -0.95
CDC42SE1-206ENST00000492796 ESRRGP62508 458 aa9.11□□□□□ -0.95
CDC42SE1-206ENST00000492796 MRPS11P82912 194 aaKnown RBP9.11□□□□□ -0.95
CDC42SE1-206ENST00000492796 DBPQ10586 325 aaPredicted RBP9.11□□□□□ -0.95
CDC42SE1-206ENST00000492796 PCK2Q16822 640 aa9.11□□□□□ -0.95
CDC42SE1-206ENST00000492796 KRTAP27-1Q3LI81 207 aa9.11□□□□□ -0.95
CDC42SE1-206ENST00000492796 FAM209AQ5JX71 171 aa9.11□□□□□ -0.95
CDC42SE1-206ENST00000492796 LINC01590Q5TEZ4 76 aa9.11□□□□□ -0.95
CDC42SE1-206ENST00000492796 ACSM5Q6NUN0 579 aa9.11□□□□□ -0.95
CDC42SE1-206ENST00000492796 ZFP1Q6P2D0 407 aa9.11□□□□□ -0.95
CDC42SE1-206ENST00000492796 C10orf67Q8IYJ2 551 aa9.11□□□□□ -0.95
CDC42SE1-206ENST00000492796 OR51L1Q8NGJ5 315 aa9.11□□□□□ -0.95
CDC42SE1-206ENST00000492796 OR5L1Q8NGL2 311 aa9.11□□□□□ -0.95
CDC42SE1-206ENST00000492796 OR6K6Q8NGW6 343 aa9.11□□□□□ -0.95
CDC42SE1-206ENST00000492796 ZNRF4Q8WWF5 429 aa9.11□□□□□ -0.95
CDC42SE1-206ENST00000492796 LRTOMTQ8WZ04 291 aa9.11□□□□□ -0.95
CDC42SE1-206ENST00000492796 SLC7A6Q92536 515 aa9.11□□□□□ -0.95
CDC42SE1-206ENST00000492796 APOBEC3DQ96AK3 386 aaPredicted RBP9.11□□□□□ -0.95
CDC42SE1-206ENST00000492796 CENPNQ96H22 339 aaPredicted RBP9.11□□□□□ -0.95
CDC42SE1-206ENST00000492796 PLEKHA8Q96JA3 519 aa9.11□□□□□ -0.95
CDC42SE1-206ENST00000492796 SMR3AQ99954 134 aa9.11□□□□□ -0.95
CDC42SE1-206ENST00000492796 OSBPL10Q9BXB5 764 aa9.11□□□□□ -0.95
CDC42SE1-206ENST00000492796 PNRC2Q9NPJ4 139 aaKnown RBP9.11□□□□□ -0.95
CDC42SE1-206ENST00000492796 KRT84Q9NSB2 600 aa9.11□□□□□ -0.95
CDC42SE1-206ENST00000492796 DDX28Q9NUL7 540 aaKnown RBP9.11□□□□□ -0.95
CDC42SE1-206ENST00000492796 BOLA1Q9Y3E2 137 aa9.11□□□□□ -0.95
CDC42SE1-206ENST00000492796 NF1P21359 2839 aa9.1□□□□□ -0.95
CDC42SE1-206ENST00000492796 ACANP16112 2415 aa9.1□□□□□ -0.95
CDC42SE1-206ENST00000492796 FAM183AA6NL82 134 aa9.1□□□□□ -0.95
CDC42SE1-206ENST00000492796 GLCEO94923 617 aa9.1□□□□□ -0.95
CDC42SE1-206ENST00000492796 LY6G6DO95868 133 aa9.1□□□□□ -0.95
CDC42SE1-206ENST00000492796 ADH4P08319 380 aa9.1□□□□□ -0.95
CDC42SE1-206ENST00000492796 DBHP09172 617 aa9.1□□□□□ -0.95
CDC42SE1-206ENST00000492796 SPARCP09486 303 aa9.1□□□□□ -0.95
CDC42SE1-206ENST00000492796 CLUP10909 449 aa9.1□□□□□ -0.95
CDC42SE1-206ENST00000492796 KITLGP21583 273 aa9.1□□□□□ -0.95
CDC42SE1-206ENST00000492796 NR4A2P43354 598 aa9.1□□□□□ -0.95
CDC42SE1-206ENST00000492796 ZNF81P51508 661 aa9.1□□□□□ -0.95
CDC42SE1-206ENST00000492796 MMP15P51511 669 aa9.1□□□□□ -0.95
CDC42SE1-206ENST00000492796 CRISP1P54107 249 aa9.1□□□□□ -0.95
CDC42SE1-206ENST00000492796 TPTEP56180 551 aa9.1□□□□□ -0.95
CDC42SE1-206ENST00000492796 CARTPTQ16568 116 aa9.1□□□□□ -0.95
CDC42SE1-206ENST00000492796 ALKBH6Q3KRA9 238 aa9.1□□□□□ -0.95
CDC42SE1-206ENST00000492796 SLC35D3Q5M8T2 416 aa9.1□□□□□ -0.95
CDC42SE1-206ENST00000492796 KDM4DQ6B0I6 523 aa9.1□□□□□ -0.95
CDC42SE1-206ENST00000492796 LYPD4Q6UWN0 246 aa9.1□□□□□ -0.95
CDC42SE1-206ENST00000492796 PYDC1Q8WXC3 89 aa9.1□□□□□ -0.95
CDC42SE1-206ENST00000492796 RDH5Q92781 318 aa9.1□□□□□ -0.95
CDC42SE1-206ENST00000492796 SPTSSAQ969W0 71 aa9.1□□□□□ -0.95
CDC42SE1-206ENST00000492796 OTULINQ96BN8 352 aa9.1□□□□□ -0.95
CDC42SE1-206ENST00000492796 MAP6Q96JE9 813 aa9.1□□□□□ -0.95
CDC42SE1-206ENST00000492796 RAB3IPQ96QF0 476 aaPredicted RBP9.1□□□□□ -0.95
CDC42SE1-206ENST00000492796 DIRC2Q96SL1 478 aa9.1□□□□□ -0.95
CDC42SE1-206ENST00000492796 INTS14Q96SY0 518 aa9.1□□□□□ -0.95
CDC42SE1-206ENST00000492796 HCAR1Q9BXC0 346 aa9.1□□□□□ -0.95
CDC42SE1-206ENST00000492796 WDR76Q9H967 626 aa9.1□□□□□ -0.95
CDC42SE1-206ENST00000492796 MARCH7Q9H992 704 aa9.1□□□□□ -0.95
CDC42SE1-206ENST00000492796 CHODLQ9H9P2 273 aa9.1□□□□□ -0.95
CDC42SE1-206ENST00000492796 M0R135 149 aa9.09□□□□□ -0.95
CDC42SE1-206ENST00000492796 ZNF593O00488 134 aaPredicted RBP9.09□□□□□ -0.95
CDC42SE1-206ENST00000492796 TIMM8AO60220 97 aaPredicted RBP9.09□□□□□ -0.95
CDC42SE1-206ENST00000492796 NCR1O76036 304 aa9.09□□□□□ -0.95
CDC42SE1-206ENST00000492796 HPXP02790 462 aa9.09□□□□□ -0.95
CDC42SE1-206ENST00000492796 ACSM4P0C7M7 580 aa9.09□□□□□ -0.95
CDC42SE1-206ENST00000492796 RAC2P15153 192 aa9.09□□□□□ -0.95
CDC42SE1-206ENST00000492796 ACHEP22303 614 aa9.09□□□□□ -0.95
CDC42SE1-206ENST00000492796 USF1P22415 310 aaPredicted RBP9.09□□□□□ -0.95
CDC42SE1-206ENST00000492796 IGFBP5P24593 272 aa9.09□□□□□ -0.95
CDC42SE1-206ENST00000492796 GSTT1P30711 240 aa9.09□□□□□ -0.95
CDC42SE1-206ENST00000492796 OTX1P32242 354 aaPredicted RBP9.09□□□□□ -0.95
CDC42SE1-206ENST00000492796 RPS27P42677 84 aaKnown RBP9.09□□□□□ -0.95
CDC42SE1-206ENST00000492796 PSG7Q13046 419 aa9.09□□□□□ -0.95
CDC42SE1-206ENST00000492796 KPNB1Q14974 876 aaKnown RBP9.09□□□□□ -0.95
CDC42SE1-206ENST00000492796 PTGES3Q15185 160 aaKnown RBP9.09□□□□□ -0.95
CDC42SE1-206ENST00000492796 TMEM255AQ5JRV8 349 aa9.09□□□□□ -0.95
CDC42SE1-206ENST00000492796 PLBD1Q6P4A8 553 aa9.09□□□□□ -0.95
CDC42SE1-206ENST00000492796 FBXW12Q6X9E4 464 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms