RNA–Protein interactions for RNA: ENST00000492539.5

NELFE-212, Transcript of negative elongation factor complex member E, humanhuman

TSL 3

Gene NELFE, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-212ENST00000492539 GPR4P46093 362 aa16.78■□□□□ 0.28
NELFE-212ENST00000492539 ARHGDIAP52565 204 aa16.78■□□□□ 0.28
NELFE-212ENST00000492539 HMGA2P52926 109 aa16.78■□□□□ 0.28
NELFE-212ENST00000492539 PCBD1P61457 104 aa16.78■□□□□ 0.28
NELFE-212ENST00000492539 TNFAIP6P98066 277 aaPredicted RBP16.78■□□□□ 0.28
NELFE-212ENST00000492539 FOXL1Q12952 345 aa16.78■□□□□ 0.28
NELFE-212ENST00000492539 PSG7Q13046 419 aa16.78■□□□□ 0.28
NELFE-212ENST00000492539 ENDOGQ14249 297 aaKnown RBP16.78■□□□□ 0.28
NELFE-212ENST00000492539 ZNF774Q6NX45 483 aa16.78■□□□□ 0.28
NELFE-212ENST00000492539 DOK3Q7L591 496 aa16.78■□□□□ 0.28
NELFE-212ENST00000492539 SYT9Q86SS6 491 aa16.78■□□□□ 0.28
NELFE-212ENST00000492539 SIGLECL1Q8N7X8 197 aa16.78■□□□□ 0.28
NELFE-212ENST00000492539 CANT1Q8WVQ1 401 aa16.78■□□□□ 0.28
NELFE-212ENST00000492539 PATZ1Q9HBE1 687 aaKnown RBP16.78■□□□□ 0.28
NELFE-212ENST00000492539 TMEM106BQ9NUM4 274 aa16.78■□□□□ 0.28
NELFE-212ENST00000492539 AURKCQ9UQB9 309 aa16.78■□□□□ 0.28
NELFE-212ENST00000492539 TMPRSS2O15393 492 aa16.77■□□□□ 0.28
NELFE-212ENST00000492539 KCNAB3O43448 404 aa16.77■□□□□ 0.28
NELFE-212ENST00000492539 OMPP47874 163 aa16.77■□□□□ 0.28
NELFE-212ENST00000492539 TMEM155Q4W5P6 130 aa16.77■□□□□ 0.28
NELFE-212ENST00000492539 FAM205BPQ63HN1 556 aa16.77■□□□□ 0.28
NELFE-212ENST00000492539 ZER1Q7Z7L7 766 aa16.77■□□□□ 0.28
NELFE-212ENST00000492539 OAFQ86UD1 273 aa16.77■□□□□ 0.28
NELFE-212ENST00000492539 SPICQ8N5J4 248 aa16.77■□□□□ 0.28
NELFE-212ENST00000492539 ZNF283Q8N7M2 679 aa16.77■□□□□ 0.28
NELFE-212ENST00000492539 FAM46AQ96IP4 442 aaKnown RBP16.77■□□□□ 0.28
NELFE-212ENST00000492539 CHID1Q9BWS9 393 aa16.77■□□□□ 0.28
NELFE-212ENST00000492539 ZNF696Q9H7X3 374 aa16.77■□□□□ 0.28
NELFE-212ENST00000492539 NUP50Q9UKX7 468 aa16.77■□□□□ 0.28
NELFE-212ENST00000492539 NDRG4Q9ULP0 352 aaKnown RBP16.77■□□□□ 0.28
NELFE-212ENST00000492539 TMCC3Q9ULS5 477 aa16.77■□□□□ 0.28
NELFE-212ENST00000492539 LYVE1Q9Y5Y7 322 aa16.77■□□□□ 0.28
NELFE-212ENST00000492539 CMYA5Q8N3K9 4069 aa16.76■□□□□ 0.27
NELFE-212ENST00000492539 A8MXK9 166 aa16.76■□□□□ 0.27
NELFE-212ENST00000492539 F5H0A9 414 aaPredicted RBP16.76■□□□□ 0.27
NELFE-212ENST00000492539 TRAPPC2LH3BP13 241 aa16.76■□□□□ 0.27
NELFE-212ENST00000492539 CDC42EP2O14613 210 aa16.76■□□□□ 0.27
NELFE-212ENST00000492539 TIMM8AO60220 97 aaPredicted RBP16.76■□□□□ 0.27
NELFE-212ENST00000492539 SBK2P0C263 348 aa16.76■□□□□ 0.27
NELFE-212ENST00000492539 COX5BP10606 129 aa16.76■□□□□ 0.27
NELFE-212ENST00000492539 ZNF12P17014 697 aa16.76■□□□□ 0.27
NELFE-212ENST00000492539 MSR1P21757 451 aa16.76■□□□□ 0.27
NELFE-212ENST00000492539 PRTN3P24158 256 aa16.76■□□□□ 0.27
NELFE-212ENST00000492539 RBMXP38159 391 aaKnown RBP16.76■□□□□ 0.27
NELFE-212ENST00000492539 CTXN1P60606 82 aa16.76■□□□□ 0.27
NELFE-212ENST00000492539 SEC61A1P61619 476 aaKnown RBP16.76■□□□□ 0.27
NELFE-212ENST00000492539 ZNF154Q13106 437 aa16.76■□□□□ 0.27
NELFE-212ENST00000492539 FHL1Q13642 323 aa16.76■□□□□ 0.27
NELFE-212ENST00000492539 ARMCX4Q5H9R4 360 aa16.76■□□□□ 0.27
NELFE-212ENST00000492539 KLF17Q5JT82 389 aaPredicted RBP16.76■□□□□ 0.27
NELFE-212ENST00000492539 OR2T5Q6IEZ7 315 aa16.76■□□□□ 0.27
NELFE-212ENST00000492539 ARL9Q6T311 187 aa16.76■□□□□ 0.27
NELFE-212ENST00000492539 SHISA2Q6UWI4 295 aa16.76■□□□□ 0.27
NELFE-212ENST00000492539 RBMS3Q6XE24 437 aaKnown RBP16.76■□□□□ 0.27
NELFE-212ENST00000492539 IGFN1Q86VF2 1251 aa16.76■□□□□ 0.27
NELFE-212ENST00000492539 NPEPL1Q8NDH3 523 aa16.76■□□□□ 0.27
NELFE-212ENST00000492539 OR4C15Q8NGM1 316 aa16.76■□□□□ 0.27
NELFE-212ENST00000492539 OR13C2Q8NGS9 318 aa16.76■□□□□ 0.27
NELFE-212ENST00000492539 OR2T29Q8NH02 315 aa16.76■□□□□ 0.27
NELFE-212ENST00000492539 SAMD8Q96LT4 415 aa16.76■□□□□ 0.27
NELFE-212ENST00000492539 C1orf147Q96MC9 270 aaPredicted RBP16.76■□□□□ 0.27
NELFE-212ENST00000492539 SIGLEC11Q96RL6 698 aa16.76■□□□□ 0.27
NELFE-212ENST00000492539 DCLRE1CQ96SD1 692 aaKnown RBP16.76■□□□□ 0.27
NELFE-212ENST00000492539 WACQ9BTA9 647 aa16.76■□□□□ 0.27
NELFE-212ENST00000492539 POFUT1Q9H488 388 aa16.76■□□□□ 0.27
NELFE-212ENST00000492539 ZMAT3Q9HA38 289 aaKnown RBP16.76■□□□□ 0.27
NELFE-212ENST00000492539 POLE4Q9NR33 117 aa16.76■□□□□ 0.27
NELFE-212ENST00000492539 TBCCD1Q9NVR7 557 aa16.76■□□□□ 0.27
NELFE-212ENST00000492539 PLEK2Q9NYT0 353 aa16.76■□□□□ 0.27
NELFE-212ENST00000492539 ZNF69Q9UC07 566 aa16.76■□□□□ 0.27
NELFE-212ENST00000492539 INSIG2Q9Y5U4 225 aa16.76■□□□□ 0.27
NELFE-212ENST00000492539 AUP1Q9Y679 476 aa16.76■□□□□ 0.27
NELFE-212ENST00000492539 TRAV27A0A087WT01 109 aa16.75■□□□□ 0.27
NELFE-212ENST00000492539 A0A1W2PPL8 197 aa16.75■□□□□ 0.27
NELFE-212ENST00000492539 TNFRSF11BO00300 401 aa16.75■□□□□ 0.27
NELFE-212ENST00000492539 ABHD16AO95870 558 aa16.75■□□□□ 0.27
NELFE-212ENST00000492539 SCG5P05408 212 aa16.75■□□□□ 0.27
NELFE-212ENST00000492539 KITLGP21583 273 aa16.75■□□□□ 0.27
NELFE-212ENST00000492539 TUBG1P23258 451 aa16.75■□□□□ 0.27
NELFE-212ENST00000492539 IFNGR2P38484 337 aa16.75■□□□□ 0.27
NELFE-212ENST00000492539 GUCA1AP43080 201 aaPredicted RBP16.75■□□□□ 0.27
NELFE-212ENST00000492539 SLC6A9P48067 706 aa16.75■□□□□ 0.27
NELFE-212ENST00000492539 C1orf146Q5VVC0 180 aa16.75■□□□□ 0.27
NELFE-212ENST00000492539 Q6ZR03 302 aa16.75■□□□□ 0.27
NELFE-212ENST00000492539 LRRC28Q86X40 367 aaPredicted RBP16.75■□□□□ 0.27
NELFE-212ENST00000492539 KLHL36Q8N4N3 616 aa16.75■□□□□ 0.27
NELFE-212ENST00000492539 PAPD5Q8NDF8 572 aaKnown RBP16.75■□□□□ 0.27
NELFE-212ENST00000492539 OR51A7Q8NH64 312 aa16.75■□□□□ 0.27
NELFE-212ENST00000492539 GPA33Q99795 319 aa16.75■□□□□ 0.27
NELFE-212ENST00000492539 TUBG2Q9NRH3 451 aa16.75■□□□□ 0.27
NELFE-212ENST00000492539 DNAJC9-AS1A6NH13 148 aa16.74■□□□□ 0.27
NELFE-212ENST00000492539 A6NIZ1 184 aa16.74■□□□□ 0.27
NELFE-212ENST00000492539 C12orf71A8MTZ7 269 aa16.74■□□□□ 0.27
NELFE-212ENST00000492539 OR10H3O60404 316 aa16.74■□□□□ 0.27
NELFE-212ENST00000492539 CIB2O75838 187 aa16.74■□□□□ 0.27
NELFE-212ENST00000492539 TNFRSF1AP19438 455 aa16.74■□□□□ 0.27
NELFE-212ENST00000492539 GSTM3P21266 225 aa16.74■□□□□ 0.27
NELFE-212ENST00000492539 RAP1BP61224 184 aa16.74■□□□□ 0.27
NELFE-212ENST00000492539 BTG1P62324 171 aa16.74■□□□□ 0.27
NELFE-212ENST00000492539 RAP1AP62834 184 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms