RNA–Protein interactions for RNA: ENST00000492270.1

UPF3A-209, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 2 BASIC

Gene UPF3A, Length 494 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-209ENST00000492270 MRPS11P82912 194 aaKnown RBP21■□□□□ 0.95
UPF3A-209ENST00000492270 BNIP1Q12981 228 aa21■□□□□ 0.95
UPF3A-209ENST00000492270 CCNIQ14094 377 aa21■□□□□ 0.95
UPF3A-209ENST00000492270 HIPK1Q86Z02 1210 aa21■□□□□ 0.95
UPF3A-209ENST00000492270 OR51L1Q8NGJ5 315 aa21■□□□□ 0.95
UPF3A-209ENST00000492270 HDHD2Q9H0R4 259 aa21■□□□□ 0.95
UPF3A-209ENST00000492270 MSL2Q9HCI7 577 aa21■□□□□ 0.95
UPF3A-209ENST00000492270 CACNG2Q9Y698 323 aa21■□□□□ 0.95
UPF3A-209ENST00000492270 TVP23AA6NH52 213 aa20.99■□□□□ 0.95
UPF3A-209ENST00000492270 GNGT2O14610 69 aa20.99■□□□□ 0.95
UPF3A-209ENST00000492270 WNT9BO14905 357 aa20.99■□□□□ 0.95
UPF3A-209ENST00000492270 GSC2O15499 205 aa20.99■□□□□ 0.95
UPF3A-209ENST00000492270 TIMM8AO60220 97 aaPredicted RBP20.99■□□□□ 0.95
UPF3A-209ENST00000492270 PSKH1P11801 424 aa20.99■□□□□ 0.95
UPF3A-209ENST00000492270 GGT2P36268 569 aa20.99■□□□□ 0.95
UPF3A-209ENST00000492270 RPS27P42677 84 aaKnown RBP20.99■□□□□ 0.95
UPF3A-209ENST00000492270 CRMP1Q14194 572 aa20.99■□□□□ 0.95
UPF3A-209ENST00000492270 SLC36A3Q495N2 470 aa20.99■□□□□ 0.95
UPF3A-209ENST00000492270 SPRNQ5BIV9 151 aa20.99■□□□□ 0.95
UPF3A-209ENST00000492270 USP51Q70EK9 711 aa20.99■□□□□ 0.95
UPF3A-209ENST00000492270 HS3ST5Q8IZT8 346 aa20.99■□□□□ 0.95
UPF3A-209ENST00000492270 PROKR2Q8NFJ6 384 aa20.99■□□□□ 0.95
UPF3A-209ENST00000492270 OR2T33Q8NG76 320 aa20.99■□□□□ 0.95
UPF3A-209ENST00000492270 COQ7Q99807 217 aa20.99■□□□□ 0.95
UPF3A-209ENST00000492270 SAP30LQ9HAJ7 183 aa20.99■□□□□ 0.95
UPF3A-209ENST00000492270 DECR2Q9NUI1 292 aa20.99■□□□□ 0.95
UPF3A-209ENST00000492270 CYB5R1Q9UHQ9 305 aa20.99■□□□□ 0.95
UPF3A-209ENST00000492270 KLHL21Q9UJP4 597 aa20.99■□□□□ 0.95
UPF3A-209ENST00000492270 DYSFO75923 2080 aa20.99■□□□□ 0.95
UPF3A-209ENST00000492270 TCRBV3S1A0A5B6 114 aa20.98■□□□□ 0.95
UPF3A-209ENST00000492270 KIAA1324LA8MWY0 1029 aaPredicted RBP20.98■□□□□ 0.95
UPF3A-209ENST00000492270 PPIHO43447 177 aaKnown RBP20.98■□□□□ 0.95
UPF3A-209ENST00000492270 GYPBP06028 91 aa20.98■□□□□ 0.95
UPF3A-209ENST00000492270 CRYBB2P43320 205 aa20.98■□□□□ 0.95
UPF3A-209ENST00000492270 GK3PQ14409 553 aa20.98■□□□□ 0.95
UPF3A-209ENST00000492270 RSPO1Q2MKA7 263 aaPredicted RBP20.98■□□□□ 0.95
UPF3A-209ENST00000492270 CD300LDQ6UXZ3 194 aa20.98■□□□□ 0.95
UPF3A-209ENST00000492270 IQCF1Q8N6M8 205 aa20.98■□□□□ 0.95
UPF3A-209ENST00000492270 CLDND2Q8NHS1 167 aa20.98■□□□□ 0.95
UPF3A-209ENST00000492270 SLCO4A1Q96BD0 722 aa20.98■□□□□ 0.95
UPF3A-209ENST00000492270 CMBLQ96DG6 245 aa20.98■□□□□ 0.95
UPF3A-209ENST00000492270 RBM4Q9BWF3 364 aaKnown RBP20.98■□□□□ 0.95
UPF3A-209ENST00000492270 CDADC1Q9BWV3 514 aa20.98■□□□□ 0.95
UPF3A-209ENST00000492270 PTTG3PQ9NZH4 202 aa20.98■□□□□ 0.95
UPF3A-209ENST00000492270 PDP1Q9P0J1 537 aaPredicted RBP20.98■□□□□ 0.95
UPF3A-209ENST00000492270 PURGQ9UJV8 347 aaKnown RBP20.98■□□□□ 0.95
UPF3A-209ENST00000492270 SVEP1Q4LDE5 3571 aa20.97■□□□□ 0.95
UPF3A-209ENST00000492270 IGHV1-69-2A0A0G2JMI3 117 aa20.97■□□□□ 0.95
UPF3A-209ENST00000492270 ARRDC5A6NEK1 342 aa20.97■□□□□ 0.95
UPF3A-209ENST00000492270 LMX1BO60663 402 aa20.97■□□□□ 0.95
UPF3A-209ENST00000492270 FKBP6O75344 327 aa20.97■□□□□ 0.95
UPF3A-209ENST00000492270 TGFAP01135 160 aa20.97■□□□□ 0.95
UPF3A-209ENST00000492270 IGFBP5P24593 272 aa20.97■□□□□ 0.95
UPF3A-209ENST00000492270 CBX1P83916 185 aa20.97■□□□□ 0.95
UPF3A-209ENST00000492270 HNRNPA0Q13151 305 aaKnown RBP20.97■□□□□ 0.95
UPF3A-209ENST00000492270 HLXQ14774 488 aaPredicted RBP20.97■□□□□ 0.95
UPF3A-209ENST00000492270 FAM166AQ6J272 317 aa20.97■□□□□ 0.95
UPF3A-209ENST00000492270 OR2AJ1Q8NGZ0 328 aa20.97■□□□□ 0.95
UPF3A-209ENST00000492270 OR2T4Q8NH00 348 aa20.97■□□□□ 0.95
UPF3A-209ENST00000492270 DCLRE1CQ96SD1 692 aaKnown RBP20.97■□□□□ 0.95
UPF3A-209ENST00000492270 PITX2Q99697 317 aa20.97■□□□□ 0.95
UPF3A-209ENST00000492270 PNRC2Q9NPJ4 139 aaKnown RBP20.97■□□□□ 0.95
UPF3A-209ENST00000492270 CYSLTR2Q9NS75 346 aa20.97■□□□□ 0.95
UPF3A-209ENST00000492270 TREM2Q9NZC2 230 aa20.97■□□□□ 0.95
UPF3A-209ENST00000492270 BAIAP2Q9UQB8 552 aa20.97■□□□□ 0.95
UPF3A-209ENST00000492270 CLUP10909 449 aa20.96■□□□□ 0.95
UPF3A-209ENST00000492270 KITLGP21583 273 aa20.96■□□□□ 0.95
UPF3A-209ENST00000492270 TMEM33P57088 247 aa20.96■□□□□ 0.95
UPF3A-209ENST00000492270 FAM209AQ5JX71 171 aa20.96■□□□□ 0.95
UPF3A-209ENST00000492270 AVPI1Q5T686 147 aa20.96■□□□□ 0.95
UPF3A-209ENST00000492270 Q6ZR03 302 aa20.96■□□□□ 0.95
UPF3A-209ENST00000492270 OR10S1Q8NGN2 331 aa20.96■□□□□ 0.95
UPF3A-209ENST00000492270 TEX47Q8TBZ9 253 aa20.96■□□□□ 0.95
UPF3A-209ENST00000492270 HPS1Q92902 700 aa20.96■□□□□ 0.95
UPF3A-209ENST00000492270 MAP6Q96JE9 813 aa20.96■□□□□ 0.95
UPF3A-209ENST00000492270 NMNAT2Q9BZQ4 307 aa20.96■□□□□ 0.95
UPF3A-209ENST00000492270 CGGBP1Q9UFW8 167 aaPredicted RBP20.96■□□□□ 0.95
UPF3A-209ENST00000492270 KCNS2Q9ULS6 477 aa20.96■□□□□ 0.95
UPF3A-209ENST00000492270 H3BN98 237 aa20.95■□□□□ 0.94
UPF3A-209ENST00000492270 ADH4P08319 380 aa20.95■□□□□ 0.94
UPF3A-209ENST00000492270 ZNF823P16415 610 aa20.95■□□□□ 0.94
UPF3A-209ENST00000492270 TUBG1P23258 451 aa20.95■□□□□ 0.94
UPF3A-209ENST00000492270 RBMXP38159 391 aaKnown RBP20.95■□□□□ 0.94
UPF3A-209ENST00000492270 LIPAP38571 399 aa20.95■□□□□ 0.94
UPF3A-209ENST00000492270 RGS6P49758 472 aa20.95■□□□□ 0.94
UPF3A-209ENST00000492270 KRTAP27-1Q3LI81 207 aa20.95■□□□□ 0.94
UPF3A-209ENST00000492270 CHRFAM7AQ494W8 412 aa20.95■□□□□ 0.94
UPF3A-209ENST00000492270 IL17RELQ6ZVW7 336 aa20.95■□□□□ 0.94
UPF3A-209ENST00000492270 PAPD5Q8NDF8 572 aaKnown RBP20.95■□□□□ 0.94
UPF3A-209ENST00000492270 ATF6BQ99941 703 aa20.95■□□□□ 0.94
UPF3A-209ENST00000492270 WDR76Q9H967 626 aa20.95■□□□□ 0.94
UPF3A-209ENST00000492270 TUBG2Q9NRH3 451 aa20.95■□□□□ 0.94
UPF3A-209ENST00000492270 TMEM160Q9NX00 188 aa20.95■□□□□ 0.94
UPF3A-209ENST00000492270 COMMD3-BMI1R4GMX3 469 aa20.95■□□□□ 0.94
UPF3A-209ENST00000492270 E2F6O75461 281 aa20.94■□□□□ 0.94
UPF3A-209ENST00000492270 ACSM4P0C7M7 580 aa20.94■□□□□ 0.94
UPF3A-209ENST00000492270 SPI1P17947 270 aa20.94■□□□□ 0.94
UPF3A-209ENST00000492270 PRKACGP22612 351 aa20.94■□□□□ 0.94
UPF3A-209ENST00000492270 MVKQ03426 396 aa20.94■□□□□ 0.94
UPF3A-209ENST00000492270 NAA40Q86UY6 237 aa20.94■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms