RNA–Protein interactions for RNA: ENST00000491881.1

VTA1-204, Transcript of vesicle trafficking 1, humanhuman

TSL 2

Gene VTA1, Length 528 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-204ENST00000491881 PRMT9Q6P2P2 845 aa2.27□□□□□ -2.05
VTA1-204ENST00000491881 FBXW12Q6X9E4 464 aa2.27□□□□□ -2.05
VTA1-204ENST00000491881 DEFB132Q7Z7B7 95 aa2.27□□□□□ -2.05
VTA1-204ENST00000491881 CTAGE6Q86UF2 777 aa2.27□□□□□ -2.05
VTA1-204ENST00000491881 CMTM1Q8IZ96 169 aa2.27□□□□□ -2.05
VTA1-204ENST00000491881 LGI3Q8N145 548 aa2.27□□□□□ -2.05
VTA1-204ENST00000491881 ZFP41Q8N8Y5 198 aa2.27□□□□□ -2.05
VTA1-204ENST00000491881 COQ8AQ8NI60 647 aa2.27□□□□□ -2.05
VTA1-204ENST00000491881 CAPSLQ8WWF8 208 aa2.27□□□□□ -2.05
VTA1-204ENST00000491881 EEF1AKMT3Q96AZ1 226 aa2.27□□□□□ -2.05
VTA1-204ENST00000491881 ECHDC3Q96DC8 303 aa2.27□□□□□ -2.05
VTA1-204ENST00000491881 RBMXL1Q96E39 390 aaKnown RBP2.27□□□□□ -2.05
VTA1-204ENST00000491881 GALNT14Q96FL9 552 aa2.27□□□□□ -2.05
VTA1-204ENST00000491881 DUS3LQ96G46 650 aaKnown RBP2.27□□□□□ -2.05
VTA1-204ENST00000491881 CAMK2N2Q96S95 79 aa2.27□□□□□ -2.05
VTA1-204ENST00000491881 RSPO3Q9BXY4 272 aaPredicted RBP2.27□□□□□ -2.05
VTA1-204ENST00000491881 ZNF160Q9HCG1 818 aa2.27□□□□□ -2.05
VTA1-204ENST00000491881 ZDHHC4Q9NPG8 344 aa2.27□□□□□ -2.05
VTA1-204ENST00000491881 DDX19AQ9NUU7 478 aaKnown RBP2.27□□□□□ -2.05
VTA1-204ENST00000491881 CCDC59Q9P031 241 aaKnown RBP2.27□□□□□ -2.05
VTA1-204ENST00000491881 OPN4Q9UHM6 478 aa2.27□□□□□ -2.05
VTA1-204ENST00000491881 ZNF835Q9Y2P0 537 aa2.27□□□□□ -2.05
VTA1-204ENST00000491881 SHROOM2Q13796 1616 aa2.27□□□□□ -2.05
VTA1-204ENST00000491881 BIVM-ERCC5R4GMW8 1640 aa2.27□□□□□ -2.05
VTA1-204ENST00000491881 KDM5CP41229 1560 aa2.27□□□□□ -2.05
VTA1-204ENST00000491881 JCADQ9P266 1359 aa2.26□□□□□ -2.05
VTA1-204ENST00000491881 TTC28Q96AY4 2481 aa2.26□□□□□ -2.05
VTA1-204ENST00000491881 TRBV11-1A0A0K0K1C0 115 aa2.26□□□□□ -2.05
VTA1-204ENST00000491881 OR2AG2A6NM03 316 aa2.26□□□□□ -2.05
VTA1-204ENST00000491881 NDUFAB1O14561 156 aa2.26□□□□□ -2.05
VTA1-204ENST00000491881 CDC40O60508 579 aaKnown RBP eCLIP2.26□□□□□ -2.05
VTA1-204ENST00000491881 ZNF286BP0CG31 522 aa2.26□□□□□ -2.05
VTA1-204ENST00000491881 MUC1P15941 1255 aaPredicted RBP2.26□□□□□ -2.05
VTA1-204ENST00000491881 OTX1P32242 354 aaPredicted RBP2.26□□□□□ -2.05
VTA1-204ENST00000491881 SSTR5P35346 364 aa2.26□□□□□ -2.05
VTA1-204ENST00000491881 HCAR3P49019 387 aa2.26□□□□□ -2.05
VTA1-204ENST00000491881 RGS8P57771 180 aaPredicted RBP2.26□□□□□ -2.05
VTA1-204ENST00000491881 LOXL1Q08397 574 aaPredicted RBP2.26□□□□□ -2.05
VTA1-204ENST00000491881 SELENBP1Q13228 472 aa2.26□□□□□ -2.05
VTA1-204ENST00000491881 SHHQ15465 462 aa2.26□□□□□ -2.05
VTA1-204ENST00000491881 ZNF726P1Q15940 193 aa2.26□□□□□ -2.05
VTA1-204ENST00000491881 LRRC66Q68CR7 880 aa2.26□□□□□ -2.05
VTA1-204ENST00000491881 SNX20Q7Z614 316 aa2.26□□□□□ -2.05
VTA1-204ENST00000491881 CMC1Q7Z7K0 106 aa2.26□□□□□ -2.05
VTA1-204ENST00000491881 WDR86Q86TI4 376 aa2.26□□□□□ -2.05
VTA1-204ENST00000491881 OR4C5Q8NGB2 326 aa2.26□□□□□ -2.05
VTA1-204ENST00000491881 ZNF461Q8TAF7 563 aa2.26□□□□□ -2.05
VTA1-204ENST00000491881 FAM81AQ8TBF8 368 aa2.26□□□□□ -2.05
VTA1-204ENST00000491881 C15orf40Q8WUR7 153 aa2.26□□□□□ -2.05
VTA1-204ENST00000491881 LRRC29Q8WV35 223 aa2.26□□□□□ -2.05
VTA1-204ENST00000491881 TMEM230Q96A57 120 aa2.26□□□□□ -2.05
VTA1-204ENST00000491881 MRGPRFQ96AM1 343 aa2.26□□□□□ -2.05
VTA1-204ENST00000491881 MCUR1Q96AQ8 359 aa2.26□□□□□ -2.05
VTA1-204ENST00000491881 OR10C1Q96KK4 312 aa2.26□□□□□ -2.05
VTA1-204ENST00000491881 TIMM17AQ99595 171 aa2.26□□□□□ -2.05
VTA1-204ENST00000491881 ANKRA2Q9H9E1 313 aa2.26□□□□□ -2.05
VTA1-204ENST00000491881 NTN4Q9HB63 628 aa2.26□□□□□ -2.05
VTA1-204ENST00000491881 NEK6Q9HC98 313 aa2.26□□□□□ -2.05
VTA1-204ENST00000491881 TMEM9BQ9NQ34 198 aa2.26□□□□□ -2.05
VTA1-204ENST00000491881 HYOU1Q9Y4L1 999 aa2.26□□□□□ -2.05
VTA1-204ENST00000491881 LAMA3Q16787 3333 aa2.25□□□□□ -2.05
VTA1-204ENST00000491881 ZFHX2Q9C0A1 2572 aaPredicted RBP2.25□□□□□ -2.05
VTA1-204ENST00000491881 PRUNE2Q8WUY3 3088 aa2.25□□□□□ -2.05
VTA1-204ENST00000491881 TRIM64CA6NLI5 447 aa2.25□□□□□ -2.05
VTA1-204ENST00000491881 SGK1O00141 431 aa2.25□□□□□ -2.05
VTA1-204ENST00000491881 EIF3HO15372 352 aaKnown RBP eCLIP2.25□□□□□ -2.05
VTA1-204ENST00000491881 ARG1P05089 322 aa2.25□□□□□ -2.05
VTA1-204ENST00000491881 EIF4EP06730 217 aaKnown RBP2.25□□□□□ -2.05
VTA1-204ENST00000491881 CD3GP09693 182 aa2.25□□□□□ -2.05
VTA1-204ENST00000491881 MYL2P10916 166 aa2.25□□□□□ -2.05
VTA1-204ENST00000491881 ERGP11308 486 aa2.25□□□□□ -2.05
VTA1-204ENST00000491881 RAB3AP20336 220 aa2.25□□□□□ -2.05
VTA1-204ENST00000491881 GTF2E2P29084 291 aaKnown RBP2.25□□□□□ -2.05
VTA1-204ENST00000491881 P2RX1P51575 399 aa2.25□□□□□ -2.05
VTA1-204ENST00000491881 PPP1CBP62140 327 aa2.25□□□□□ -2.05
VTA1-204ENST00000491881 SP4Q02446 784 aa2.25□□□□□ -2.05
VTA1-204ENST00000491881 MOBPQ13875 183 aa2.25□□□□□ -2.05
VTA1-204ENST00000491881 SNRNP35Q16560 246 aaKnown RBP2.25□□□□□ -2.05
VTA1-204ENST00000491881 XKR4Q5GH76 650 aa2.25□□□□□ -2.05
VTA1-204ENST00000491881 SPANXN2Q5MJ10 180 aa2.25□□□□□ -2.05
VTA1-204ENST00000491881 ZNF684Q5T5D7 378 aa2.25□□□□□ -2.05
VTA1-204ENST00000491881 UBE2UQ5VVX9 321 aa2.25□□□□□ -2.05
VTA1-204ENST00000491881 GPR107Q5VW38 600 aa2.25□□□□□ -2.05
VTA1-204ENST00000491881 Q5W150 140 aa2.25□□□□□ -2.05
VTA1-204ENST00000491881 ZNF880Q6PDB4 577 aa2.25□□□□□ -2.05
VTA1-204ENST00000491881 TTC23LQ6PF05 361 aa2.25□□□□□ -2.05
VTA1-204ENST00000491881 SHISA6Q6ZSJ9 500 aa2.25□□□□□ -2.05
VTA1-204ENST00000491881 NTM-AS1Q6ZSK4 140 aa2.25□□□□□ -2.05
VTA1-204ENST00000491881 MRPL55Q7Z7F7 128 aaKnown RBP2.25□□□□□ -2.05
VTA1-204ENST00000491881 BBS5Q8N3I7 341 aa2.25□□□□□ -2.05
VTA1-204ENST00000491881 ZNF615Q8N8J6 731 aa2.25□□□□□ -2.05
VTA1-204ENST00000491881 PIFOQ8TCI5 191 aa2.25□□□□□ -2.05
VTA1-204ENST00000491881 APH1BQ8WW43 257 aa2.25□□□□□ -2.05
VTA1-204ENST00000491881 RGP1Q92546 391 aaPredicted RBP2.25□□□□□ -2.05
VTA1-204ENST00000491881 NARS2Q96I59 477 aaKnown RBP2.25□□□□□ -2.05
VTA1-204ENST00000491881 RNF157Q96PX1 679 aa2.25□□□□□ -2.05
VTA1-204ENST00000491881 CHP1Q99653 195 aa2.25□□□□□ -2.05
VTA1-204ENST00000491881 LZTS2Q9BRK4 669 aa2.25□□□□□ -2.05
VTA1-204ENST00000491881 AKNAQ7Z591 1439 aa2.25□□□□□ -2.05
VTA1-204ENST00000491881 USP34Q70CQ2 3546 aa2.24□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms