RNA–Protein interactions for RNA: ENST00000491833.5

SSR4-212, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 3

Gene SSR4, Length 921 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-212ENST00000491833 NSMAFQ92636 917 aa12.12□□□□□ -0.47
SSR4-212ENST00000491833 ASB9Q96DX5 294 aa12.12□□□□□ -0.47
SSR4-212ENST00000491833 CLPTM1LQ96KA5 538 aa12.12□□□□□ -0.47
SSR4-212ENST00000491833 C4orf45Q96LM5 186 aa12.12□□□□□ -0.47
SSR4-212ENST00000491833 PCDHAC1Q9H158 963 aa12.12□□□□□ -0.47
SSR4-212ENST00000491833 TNFRSF19Q9NS68 423 aa12.12□□□□□ -0.47
SSR4-212ENST00000491833 MAN2C1Q9NTJ4 1040 aa12.12□□□□□ -0.47
SSR4-212ENST00000491833 ACTR3BQ9P1U1 418 aa12.12□□□□□ -0.47
SSR4-212ENST00000491833 NDRG4Q9ULP0 352 aaKnown RBP12.12□□□□□ -0.47
SSR4-212ENST00000491833 FAM32AQ9Y421 112 aaKnown RBP12.12□□□□□ -0.47
SSR4-212ENST00000491833 IGKV1D-43A0A0B4J1Z2 117 aa12.11□□□□□ -0.47
SSR4-212ENST00000491833 NDUFA7O95182 113 aa12.11□□□□□ -0.47
SSR4-212ENST00000491833 ABHD16AO95870 558 aa12.11□□□□□ -0.47
SSR4-212ENST00000491833 CST2P09228 141 aa12.11□□□□□ -0.47
SSR4-212ENST00000491833 TNFRSF1BP20333 461 aa12.11□□□□□ -0.47
SSR4-212ENST00000491833 CPT2P23786 658 aa12.11□□□□□ -0.47
SSR4-212ENST00000491833 OR1E2P47887 323 aa12.11□□□□□ -0.47
SSR4-212ENST00000491833 MMP16P51512 607 aa12.11□□□□□ -0.47
SSR4-212ENST00000491833 PCBD1P61457 104 aa12.11□□□□□ -0.47
SSR4-212ENST00000491833 TRIM25Q14258 630 aaKnown RBP12.11□□□□□ -0.47
SSR4-212ENST00000491833 FAM27BQ5VT28 67 aa12.11□□□□□ -0.47
SSR4-212ENST00000491833 ZNF774Q6NX45 483 aa12.11□□□□□ -0.47
SSR4-212ENST00000491833 BRD3OSQ6XYD6 125 aa12.11□□□□□ -0.47
SSR4-212ENST00000491833 VTCN1Q7Z7D3 282 aa12.11□□□□□ -0.47
SSR4-212ENST00000491833 RBM45Q8IUH3 476 aaKnown RBP12.11□□□□□ -0.47
SSR4-212ENST00000491833 OR10S1Q8NGN2 331 aa12.11□□□□□ -0.47
SSR4-212ENST00000491833 RAB40AQ8WXH6 277 aa12.11□□□□□ -0.47
SSR4-212ENST00000491833 HDAC2Q92769 488 aaKnown RBP12.11□□□□□ -0.47
SSR4-212ENST00000491833 SLC7A6OSQ96CW6 309 aaPredicted RBP12.11□□□□□ -0.47
SSR4-212ENST00000491833 NMD3Q96D46 503 aaKnown RBP12.11□□□□□ -0.47
SSR4-212ENST00000491833 RSRC1Q96IZ7 334 aaKnown RBP12.11□□□□□ -0.47
SSR4-212ENST00000491833 PLEKHA8Q96JA3 519 aa12.11□□□□□ -0.47
SSR4-212ENST00000491833 OR2V2Q96R30 315 aa12.11□□□□□ -0.47
SSR4-212ENST00000491833 PRDM13Q9H4Q3 707 aa12.11□□□□□ -0.47
SSR4-212ENST00000491833 GORASP2Q9H8Y8 452 aa12.11□□□□□ -0.47
SSR4-212ENST00000491833 MEPEQ9NQ76 525 aaPredicted RBP12.11□□□□□ -0.47
SSR4-212ENST00000491833 C1RLQ9NZP8 487 aa12.11□□□□□ -0.47
SSR4-212ENST00000491833 CD300AQ9UGN4 299 aa12.11□□□□□ -0.47
SSR4-212ENST00000491833 NOTCH1P46531 2555 aa12.1□□□□□ -0.47
SSR4-212ENST00000491833 CLPSL1A2RUU4 121 aa12.1□□□□□ -0.47
SSR4-212ENST00000491833 TMEM178BH3BS89 294 aa12.1□□□□□ -0.47
SSR4-212ENST00000491833 IFNL4K9M1U5 179 aa12.1□□□□□ -0.47
SSR4-212ENST00000491833 OR7A10O76100 309 aa12.1□□□□□ -0.47
SSR4-212ENST00000491833 MT-ND1P03886 318 aa12.1□□□□□ -0.47
SSR4-212ENST00000491833 WNT2P09544 360 aa12.1□□□□□ -0.47
SSR4-212ENST00000491833 ATP6V1B2P21281 511 aa12.1□□□□□ -0.47
SSR4-212ENST00000491833 KITLGP21583 273 aa12.1□□□□□ -0.47
SSR4-212ENST00000491833 LAP3P28838 519 aa12.1□□□□□ -0.47
SSR4-212ENST00000491833 AQP2P41181 271 aa12.1□□□□□ -0.47
SSR4-212ENST00000491833 RELBQ01201 579 aa12.1□□□□□ -0.47
SSR4-212ENST00000491833 PDCD1Q15116 288 aa12.1□□□□□ -0.47
SSR4-212ENST00000491833 ARMC4Q5T2S8 1044 aa12.1□□□□□ -0.47
SSR4-212ENST00000491833 GPR157Q5UAW9 335 aa12.1□□□□□ -0.47
SSR4-212ENST00000491833 LCN8Q6JVE9 175 aa12.1□□□□□ -0.47
SSR4-212ENST00000491833 Q6ZR03 302 aa12.1□□□□□ -0.47
SSR4-212ENST00000491833 RHOUQ7L0Q8 258 aa12.1□□□□□ -0.47
SSR4-212ENST00000491833 TSPYL5Q86VY4 417 aaPredicted RBP12.1□□□□□ -0.47
SSR4-212ENST00000491833 SPATA24Q86W54 205 aa12.1□□□□□ -0.47
SSR4-212ENST00000491833 KLBQ86Z14 1044 aa12.1□□□□□ -0.47
SSR4-212ENST00000491833 OR4D11Q8NGI4 311 aa12.1□□□□□ -0.47
SSR4-212ENST00000491833 PFN4Q8NHR9 129 aa12.1□□□□□ -0.47
SSR4-212ENST00000491833 DACT3Q96B18 629 aaPredicted RBP12.1□□□□□ -0.47
SSR4-212ENST00000491833 PRRC1Q96M27 445 aa12.1□□□□□ -0.47
SSR4-212ENST00000491833 RBM4BQ9BQ04 359 aaKnown RBP12.1□□□□□ -0.47
SSR4-212ENST00000491833 POLR2J2Q9GZM3 115 aaKnown RBP12.1□□□□□ -0.47
SSR4-212ENST00000491833 POLR2J3Q9H1A7 115 aaKnown RBP12.1□□□□□ -0.47
SSR4-212ENST00000491833 MMADHCQ9H3L0 296 aaPredicted RBP12.1□□□□□ -0.47
SSR4-212ENST00000491833 MARCH7Q9H992 704 aa12.1□□□□□ -0.47
SSR4-212ENST00000491833 NOX4Q9NPH5 578 aa12.1□□□□□ -0.47
SSR4-212ENST00000491833 DCAF13Q9NV06 445 aaKnown RBP12.1□□□□□ -0.47
SSR4-212ENST00000491833 MIOXQ9UGB7 285 aa12.1□□□□□ -0.47
SSR4-212ENST00000491833 TIMM10BQ9Y5J6 103 aa12.1□□□□□ -0.47
SSR4-212ENST00000491833 NPIPB13A6NJU9 1138 aa12.09□□□□□ -0.47
SSR4-212ENST00000491833 NPIPB4C9JG80 1138 aa12.09□□□□□ -0.47
SSR4-212ENST00000491833 FABP3P05413 133 aa12.09□□□□□ -0.47
SSR4-212ENST00000491833 FUT1P19526 365 aa12.09□□□□□ -0.47
SSR4-212ENST00000491833 TUBG1P23258 451 aa12.09□□□□□ -0.47
SSR4-212ENST00000491833 GUCA1AP43080 201 aaPredicted RBP12.09□□□□□ -0.47
SSR4-212ENST00000491833 CRYBA2P53672 197 aa12.09□□□□□ -0.47
SSR4-212ENST00000491833 BPIFB3P59826 476 aa12.09□□□□□ -0.47
SSR4-212ENST00000491833 TRAP1Q12931 704 aaKnown RBP12.09□□□□□ -0.47
SSR4-212ENST00000491833 FAM98BQ52LJ0 330 aaKnown RBP12.09□□□□□ -0.47
SSR4-212ENST00000491833 C1orf146Q5VVC0 180 aa12.09□□□□□ -0.47
SSR4-212ENST00000491833 SLC25A47Q6Q0C1 308 aa12.09□□□□□ -0.47
SSR4-212ENST00000491833 TMEM86BQ8N661 226 aa12.09□□□□□ -0.47
SSR4-212ENST00000491833 OR8B3Q8NGG8 313 aa12.09□□□□□ -0.47
SSR4-212ENST00000491833 FNDC8Q8TC99 324 aa12.09□□□□□ -0.47
SSR4-212ENST00000491833 SGTBQ96EQ0 304 aa12.09□□□□□ -0.47
SSR4-212ENST00000491833 NEIL1Q96FI4 390 aaPredicted RBP12.09□□□□□ -0.47
SSR4-212ENST00000491833 PYURFQ96I23 114 aa12.09□□□□□ -0.47
SSR4-212ENST00000491833 RAB3IPQ96QF0 476 aaPredicted RBP12.09□□□□□ -0.47
SSR4-212ENST00000491833 OR8B2Q96RD0 313 aa12.09□□□□□ -0.47
SSR4-212ENST00000491833 PRSS27Q9BQR3 290 aa12.09□□□□□ -0.47
SSR4-212ENST00000491833 SLC30A2Q9BRI3 323 aa12.09□□□□□ -0.47
SSR4-212ENST00000491833 ALG12Q9BV10 488 aa12.09□□□□□ -0.47
SSR4-212ENST00000491833 FNDC11Q9BVV2 318 aa12.09□□□□□ -0.47
SSR4-212ENST00000491833 CHIAQ9BZP6 476 aa12.09□□□□□ -0.47
SSR4-212ENST00000491833 POFUT1Q9H488 388 aa12.09□□□□□ -0.47
SSR4-212ENST00000491833 TUBG2Q9NRH3 451 aa12.09□□□□□ -0.47
SSR4-212ENST00000491833 A0A1W2PPL8 197 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms