RNA–Protein interactions for RNA: ENST00000491258.1

PHC3-213, Transcript of polyhomeotic homolog 3, humanhuman

TSL 1 (best)

Gene PHC3, Length 719 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHC3-213ENST00000491258 CTAG2O75638 210 aa2.3□□□□□ -2.04
PHC3-213ENST00000491258 SEMA3DO95025 777 aa2.3□□□□□ -2.04
PHC3-213ENST00000491258 KLHL2O95198 593 aa2.3□□□□□ -2.04
PHC3-213ENST00000491258 SNX4O95219 450 aa2.3□□□□□ -2.04
PHC3-213ENST00000491258 LRATO95237 230 aa2.3□□□□□ -2.04
PHC3-213ENST00000491258 AIFM1O95831 613 aa2.3□□□□□ -2.04
PHC3-213ENST00000491258 EPPINO95925 133 aa2.3□□□□□ -2.04
PHC3-213ENST00000491258 KLK1P06870 262 aa2.3□□□□□ -2.04
PHC3-213ENST00000491258 RBP1P09455 135 aa2.3□□□□□ -2.04
PHC3-213ENST00000491258 CT62P0C5K7 136 aa2.3□□□□□ -2.04
PHC3-213ENST00000491258 FAM58BPP0C7Q3 252 aa2.3□□□□□ -2.04
PHC3-213ENST00000491258 GABRA1P14867 456 aa2.3□□□□□ -2.04
PHC3-213ENST00000491258 ID1P41134 155 aa2.3□□□□□ -2.04
PHC3-213ENST00000491258 CASP3P42574 277 aa2.3□□□□□ -2.04
PHC3-213ENST00000491258 MAGEA12P43365 314 aa2.3□□□□□ -2.04
PHC3-213ENST00000491258 OR3A1P47881 315 aa2.3□□□□□ -2.04
PHC3-213ENST00000491258 TRPC1P48995 793 aa2.3□□□□□ -2.04
PHC3-213ENST00000491258 CDK9P50750 372 aaKnown RBP2.3□□□□□ -2.04
PHC3-213ENST00000491258 XKP51811 444 aa2.3□□□□□ -2.04
PHC3-213ENST00000491258 RAP1GDS1P52306 607 aa2.3□□□□□ -2.04
PHC3-213ENST00000491258 FBXW4P57775 412 aa2.3□□□□□ -2.04
PHC3-213ENST00000491258 HERVK_113P63132 956 aa2.3□□□□□ -2.04
PHC3-213ENST00000491258 ERVK-8P63133 956 aa2.3□□□□□ -2.04
PHC3-213ENST00000491258 KCNJ2P63252 427 aa2.3□□□□□ -2.04
PHC3-213ENST00000491258 TNFRSF17Q02223 184 aa2.3□□□□□ -2.04
PHC3-213ENST00000491258 CAV1Q03135 178 aa2.3□□□□□ -2.04
PHC3-213ENST00000491258 NAB1Q13506 487 aa2.3□□□□□ -2.04
PHC3-213ENST00000491258 DDX39BQ13838 428 aaKnown RBP2.3□□□□□ -2.04
PHC3-213ENST00000491258 EBPQ15125 230 aaKnown RBP2.3□□□□□ -2.04
PHC3-213ENST00000491258 FBXL19-AS1Q494R0 122 aa2.3□□□□□ -2.04
PHC3-213ENST00000491258 NHSL2Q5HYW2 709 aa2.3□□□□□ -2.04
PHC3-213ENST00000491258 C1orf185Q5T7R7 199 aa2.3□□□□□ -2.04
PHC3-213ENST00000491258 PRAMEF20Q5VT98 475 aa2.3□□□□□ -2.04
PHC3-213ENST00000491258 SHEQ5VZ18 495 aa2.3□□□□□ -2.04
PHC3-213ENST00000491258 FAM91A1Q658Y4 838 aa2.3□□□□□ -2.04
PHC3-213ENST00000491258 TIGD3Q6B0B8 471 aa2.3□□□□□ -2.04
PHC3-213ENST00000491258 ZNF770Q6IQ21 691 aaPredicted RBP2.3□□□□□ -2.04
PHC3-213ENST00000491258 ARSKQ6UWY0 536 aa2.3□□□□□ -2.04
PHC3-213ENST00000491258 GOLGA7Q7Z5G4 137 aa2.3□□□□□ -2.04
PHC3-213ENST00000491258 CCDC91Q7Z6B0 441 aa2.3□□□□□ -2.04
PHC3-213ENST00000491258 CLYBLQ8N0X4 340 aa2.3□□□□□ -2.04
PHC3-213ENST00000491258 ZNF615Q8N8J6 731 aa2.3□□□□□ -2.04
PHC3-213ENST00000491258 OR7G1Q8NGA0 311 aa2.3□□□□□ -2.04
PHC3-213ENST00000491258 OR10G3Q8NGC4 313 aa2.3□□□□□ -2.04
PHC3-213ENST00000491258 SLC22A8Q8TCC7 542 aa2.3□□□□□ -2.04
PHC3-213ENST00000491258 GPR148Q8TDV2 347 aa2.3□□□□□ -2.04
PHC3-213ENST00000491258 NRGNQ92686 78 aa2.3□□□□□ -2.04
PHC3-213ENST00000491258 ADIPOR1Q96A54 375 aa2.3□□□□□ -2.04
PHC3-213ENST00000491258 TECTBQ96PL2 329 aa2.3□□□□□ -2.04
PHC3-213ENST00000491258 SECISBP2Q96T21 854 aaKnown RBP2.3□□□□□ -2.04
PHC3-213ENST00000491258 SERPINI1Q99574 410 aa2.3□□□□□ -2.04
PHC3-213ENST00000491258 FOXC2Q99958 501 aa2.3□□□□□ -2.04
PHC3-213ENST00000491258 ZNF559Q9BR84 538 aa2.3□□□□□ -2.04
PHC3-213ENST00000491258 PELOQ9BRX2 385 aaKnown RBP2.3□□□□□ -2.04
PHC3-213ENST00000491258 CENPKQ9BS16 269 aa2.3□□□□□ -2.04
PHC3-213ENST00000491258 DOHHQ9BU89 302 aa2.3□□□□□ -2.04
PHC3-213ENST00000491258 NTMT1Q9BV86 223 aa2.3□□□□□ -2.04
PHC3-213ENST00000491258 ERVK-6Q9BXR3 956 aa2.3□□□□□ -2.04
PHC3-213ENST00000491258 ANGPTL4Q9BY76 406 aa2.3□□□□□ -2.04
PHC3-213ENST00000491258 FUT8Q9BYC5 575 aa2.3□□□□□ -2.04
PHC3-213ENST00000491258 OR10A4Q9H209 315 aa2.3□□□□□ -2.04
PHC3-213ENST00000491258 CXXC4Q9H2H0 198 aa2.3□□□□□ -2.04
PHC3-213ENST00000491258 ACTR8Q9H981 624 aa2.3□□□□□ -2.04
PHC3-213ENST00000491258 SDAD1Q9NVU7 687 aaKnown RBP eCLIP2.3□□□□□ -2.04
PHC3-213ENST00000491258 LYARQ9NX58 379 aaKnown RBP2.3□□□□□ -2.04
PHC3-213ENST00000491258 QPCTLQ9NXS2 382 aa2.3□□□□□ -2.04
PHC3-213ENST00000491258 CNIH4Q9P003 139 aa2.3□□□□□ -2.04
PHC3-213ENST00000491258 COPS7AQ9UBW8 275 aa2.3□□□□□ -2.04
PHC3-213ENST00000491258 FETUBQ9UGM5 382 aa2.3□□□□□ -2.04
PHC3-213ENST00000491258 ZNF639Q9UID6 485 aa2.3□□□□□ -2.04
PHC3-213ENST00000491258 PHF11Q9UIL8 331 aa2.3□□□□□ -2.04
PHC3-213ENST00000491258 ZNF225Q9UK10 706 aa2.3□□□□□ -2.04
PHC3-213ENST00000491258 CES1P1Q9UKY3 287 aa2.3□□□□□ -2.04
PHC3-213ENST00000491258 BOKQ9UMX3 212 aaPredicted RBP2.3□□□□□ -2.04
PHC3-213ENST00000491258 ERVK-19Q9WJR5 959 aa2.3□□□□□ -2.04
PHC3-213ENST00000491258 UTP11Q9Y3A2 253 aaKnown RBP2.3□□□□□ -2.04
PHC3-213ENST00000491258 RNF11Q9Y3C5 154 aa2.3□□□□□ -2.04
PHC3-213ENST00000491258 L3MBTL1Q9Y468 752 aa2.3□□□□□ -2.04
PHC3-213ENST00000491258 IKBKGQ9Y6K9 419 aa2.3□□□□□ -2.04
PHC3-213ENST00000491258 SPACA6W5XKT8 324 aa2.3□□□□□ -2.04
PHC3-213ENST00000491258 AKAP9Q99996 3911 aa2.3□□□□□ -2.04
PHC3-213ENST00000491258 MYO16Q9Y6X6 1858 aa2.3□□□□□ -2.04
PHC3-213ENST00000491258 TCHHQ07283 1943 aa2.3□□□□□ -2.04
PHC3-213ENST00000491258 RP1P56715 2156 aa2.29□□□□□ -2.04
PHC3-213ENST00000491258 TRPM6Q9BX84 2022 aa2.29□□□□□ -2.04
PHC3-213ENST00000491258 C15orf38-AP3S2A0A0A6YYH1 394 aa2.29□□□□□ -2.04
PHC3-213ENST00000491258 C2orf92A0A1B0GVN3 265 aa2.29□□□□□ -2.04
PHC3-213ENST00000491258 MANBAO00462 879 aa2.29□□□□□ -2.04
PHC3-213ENST00000491258 TP53I11O14683 189 aa2.29□□□□□ -2.04
PHC3-213ENST00000491258 ACOX3O15254 700 aa2.29□□□□□ -2.04
PHC3-213ENST00000491258 ICOSLGO75144 302 aa2.29□□□□□ -2.04
PHC3-213ENST00000491258 TRAPPC6AO75865 159 aa2.29□□□□□ -2.04
PHC3-213ENST00000491258 CLDN9O95484 217 aa2.29□□□□□ -2.04
PHC3-213ENST00000491258 HPNP05981 417 aa2.29□□□□□ -2.04
PHC3-213ENST00000491258 LYNP07948 512 aa2.29□□□□□ -2.04
PHC3-213ENST00000491258 GFAPP14136 432 aa2.29□□□□□ -2.04
PHC3-213ENST00000491258 CD99P14209 185 aa2.29□□□□□ -2.04
PHC3-213ENST00000491258 CPMP14384 443 aa2.29□□□□□ -2.04
PHC3-213ENST00000491258 ADRA2CP18825 462 aa2.29□□□□□ -2.04
PHC3-213ENST00000491258 DRD5P21918 477 aa2.29□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms