RNA–Protein interactions for RNA: ENST00000490800.1

CLDN1-202, Transcript of claudin 1, humanhuman

TSL 2

Gene CLDN1, Length 432 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN1-202ENST00000490800 SLC35F2Q8IXU6 374 aa6.63□□□□□ -1.35
CLDN1-202ENST00000490800 TIGD4Q8IY51 512 aa6.63□□□□□ -1.35
CLDN1-202ENST00000490800 TMEM123Q8N131 208 aa6.63□□□□□ -1.35
CLDN1-202ENST00000490800 ACBD7Q8N6N7 88 aa6.63□□□□□ -1.35
CLDN1-202ENST00000490800 ZNF485Q8NCK3 441 aa6.63□□□□□ -1.35
CLDN1-202ENST00000490800 NOXO1Q8NFA2 376 aa6.63□□□□□ -1.35
CLDN1-202ENST00000490800 YIPF6Q96EC8 236 aa6.63□□□□□ -1.35
CLDN1-202ENST00000490800 PIK3IP1Q96FE7 263 aa6.63□□□□□ -1.35
CLDN1-202ENST00000490800 MISP3Q96FF7 219 aa6.63□□□□□ -1.35
CLDN1-202ENST00000490800 SLC25A44Q96H78 314 aaPredicted RBP6.63□□□□□ -1.35
CLDN1-202ENST00000490800 ZC3HAV1LQ96H79 300 aaKnown RBP6.63□□□□□ -1.35
CLDN1-202ENST00000490800 C1orf159Q96HA4 380 aa6.63□□□□□ -1.35
CLDN1-202ENST00000490800 ADAD1Q96M93 576 aaKnown RBP6.63□□□□□ -1.35
CLDN1-202ENST00000490800 COG8Q96MW5 612 aa6.63□□□□□ -1.35
CLDN1-202ENST00000490800 ZNF385AQ96PM9 386 aaKnown RBP6.63□□□□□ -1.35
CLDN1-202ENST00000490800 OR2M2Q96R28 347 aa6.63□□□□□ -1.35
CLDN1-202ENST00000490800 TBX5Q99593 518 aa6.63□□□□□ -1.35
CLDN1-202ENST00000490800 MED18Q9BUE0 208 aa6.63□□□□□ -1.35
CLDN1-202ENST00000490800 MND1Q9BWT6 205 aa6.63□□□□□ -1.35
CLDN1-202ENST00000490800 RACGAP1Q9H0H5 632 aa6.63□□□□□ -1.35
CLDN1-202ENST00000490800 RERGLQ9H628 205 aa6.63□□□□□ -1.35
CLDN1-202ENST00000490800 MARCH7Q9H992 704 aa6.63□□□□□ -1.35
CLDN1-202ENST00000490800 DLL4Q9NR61 685 aa6.63□□□□□ -1.35
CLDN1-202ENST00000490800 INPP5EQ9NRR6 644 aa6.63□□□□□ -1.35
CLDN1-202ENST00000490800 CHCHD3Q9NX63 227 aaKnown RBP6.63□□□□□ -1.35
CLDN1-202ENST00000490800 ING1Q9UK53 422 aaPredicted RBP6.63□□□□□ -1.35
CLDN1-202ENST00000490800 CLEC4AQ9UMR7 237 aa6.63□□□□□ -1.35
CLDN1-202ENST00000490800 ABCA4P78363 2273 aa6.62□□□□□ -1.35
CLDN1-202ENST00000490800 MED12LQ86YW9 2145 aa6.62□□□□□ -1.35
CLDN1-202ENST00000490800 NIPBLQ6KC79 2804 aaeCLIP6.62□□□□□ -1.35
CLDN1-202ENST00000490800 IGKV3D-15A0A087WSY6 115 aa6.62□□□□□ -1.35
CLDN1-202ENST00000490800 A0A1W2PQL4 384 aaPredicted RBP6.62□□□□□ -1.35
CLDN1-202ENST00000490800 DAPL1A0PJW8 107 aa6.62□□□□□ -1.35
CLDN1-202ENST00000490800 TMEM82A0PJX8 343 aa6.62□□□□□ -1.35
CLDN1-202ENST00000490800 CENPBD1B2RD01 187 aa6.62□□□□□ -1.35
CLDN1-202ENST00000490800 MYL12BO14950 172 aa6.62□□□□□ -1.35
CLDN1-202ENST00000490800 KHDRBS3O75525 346 aaKnown RBP6.62□□□□□ -1.35
CLDN1-202ENST00000490800 ZNF432O94892 652 aa6.62□□□□□ -1.35
CLDN1-202ENST00000490800 SYNGR4O95473 234 aa6.62□□□□□ -1.35
CLDN1-202ENST00000490800 OR2T7P0C7T2 308 aa6.62□□□□□ -1.35
CLDN1-202ENST00000490800 PSKH1P11801 424 aa6.62□□□□□ -1.35
CLDN1-202ENST00000490800 CRYGSP22914 178 aa6.62□□□□□ -1.35
CLDN1-202ENST00000490800 TGFBR2P37173 567 aa6.62□□□□□ -1.35
CLDN1-202ENST00000490800 LIPAP38571 399 aa6.62□□□□□ -1.35
CLDN1-202ENST00000490800 WNT4P56705 351 aa6.62□□□□□ -1.35
CLDN1-202ENST00000490800 CLRN1P58418 232 aa6.62□□□□□ -1.35
CLDN1-202ENST00000490800 ACTC1P68032 377 aa6.62□□□□□ -1.35
CLDN1-202ENST00000490800 ACTA1P68133 377 aa6.62□□□□□ -1.35
CLDN1-202ENST00000490800 RASGEF1BQ0VAM2 473 aa6.62□□□□□ -1.35
CLDN1-202ENST00000490800 GALEQ14376 348 aa6.62□□□□□ -1.35
CLDN1-202ENST00000490800 GUSBP1Q15486 140 aa6.62□□□□□ -1.35
CLDN1-202ENST00000490800 SPHARQ15513 63 aa6.62□□□□□ -1.35
CLDN1-202ENST00000490800 MED22Q15528 200 aa6.62□□□□□ -1.35
CLDN1-202ENST00000490800 HIST3H3Q16695 136 aa6.62□□□□□ -1.35
CLDN1-202ENST00000490800 ARMCX4Q5H9R4 360 aa6.62□□□□□ -1.35
CLDN1-202ENST00000490800 THEM4Q5T1C6 240 aa6.62□□□□□ -1.35
CLDN1-202ENST00000490800 OR2G6Q5TZ20 316 aa6.62□□□□□ -1.35
CLDN1-202ENST00000490800 GPR107Q5VW38 600 aa6.62□□□□□ -1.35
CLDN1-202ENST00000490800 CARD17Q5XLA6 110 aa6.62□□□□□ -1.35
CLDN1-202ENST00000490800 DNM1P34Q6PK57 102 aa6.62□□□□□ -1.35
CLDN1-202ENST00000490800 SLC25A47Q6Q0C1 308 aa6.62□□□□□ -1.35
CLDN1-202ENST00000490800 ZNF322Q6U7Q0 402 aaPredicted RBP6.62□□□□□ -1.35
CLDN1-202ENST00000490800 SSX6Q7RTT6 188 aa6.62□□□□□ -1.35
CLDN1-202ENST00000490800 CLVS1Q8IUQ0 354 aaPredicted RBP6.62□□□□□ -1.35
CLDN1-202ENST00000490800 ERI1Q8IV48 349 aaKnown RBP6.62□□□□□ -1.35
CLDN1-202ENST00000490800 C20orf196Q8IYI0 205 aa6.62□□□□□ -1.35
CLDN1-202ENST00000490800 KLHL36Q8N4N3 616 aa6.62□□□□□ -1.35
CLDN1-202ENST00000490800 RFLNBQ8N5W9 214 aa6.62□□□□□ -1.35
CLDN1-202ENST00000490800 OR2T27Q8NH04 317 aa6.62□□□□□ -1.35
CLDN1-202ENST00000490800 OR52N1Q8NH53 320 aa6.62□□□□□ -1.35
CLDN1-202ENST00000490800 RNF128Q8TEB7 428 aa6.62□□□□□ -1.35
CLDN1-202ENST00000490800 ABHD3Q8WU67 409 aa6.62□□□□□ -1.35
CLDN1-202ENST00000490800 SPRYD4Q8WW59 207 aaPredicted RBP6.62□□□□□ -1.35
CLDN1-202ENST00000490800 TMEM54Q969K7 222 aa6.62□□□□□ -1.35
CLDN1-202ENST00000490800 DGCR14Q96DF8 476 aaKnown RBP6.62□□□□□ -1.35
CLDN1-202ENST00000490800 FOXN4Q96NZ1 517 aa6.62□□□□□ -1.35
CLDN1-202ENST00000490800 OPALINQ96PE5 141 aa6.62□□□□□ -1.35
CLDN1-202ENST00000490800 RBP7Q96R05 134 aa6.62□□□□□ -1.35
CLDN1-202ENST00000490800 INTS14Q96SY0 518 aa6.62□□□□□ -1.35
CLDN1-202ENST00000490800 MGLLQ99685 303 aa6.62□□□□□ -1.35
CLDN1-202ENST00000490800 SMR3AQ99954 134 aa6.62□□□□□ -1.35
CLDN1-202ENST00000490800 ALG8Q9BVK2 526 aa6.62□□□□□ -1.35
CLDN1-202ENST00000490800 YIPF3Q9GZM5 350 aa6.62□□□□□ -1.35
CLDN1-202ENST00000490800 NAA50Q9GZZ1 169 aaKnown RBP6.62□□□□□ -1.35
CLDN1-202ENST00000490800 WDR76Q9H967 626 aa6.62□□□□□ -1.35
CLDN1-202ENST00000490800 PLSCR4Q9NRQ2 329 aa6.62□□□□□ -1.35
CLDN1-202ENST00000490800 BEX4Q9NWD9 120 aaPredicted RBP6.62□□□□□ -1.35
CLDN1-202ENST00000490800 MRPL22Q9NWU5 206 aaKnown RBP6.62□□□□□ -1.35
CLDN1-202ENST00000490800 PAQR5Q9NXK6 330 aaPredicted RBP6.62□□□□□ -1.35
CLDN1-202ENST00000490800 COPS3Q9UNS2 423 aa6.62□□□□□ -1.35
CLDN1-202ENST00000490800 COA3Q9Y2R0 106 aaPredicted RBP6.62□□□□□ -1.35
CLDN1-202ENST00000490800 CAB39Q9Y376 341 aaPredicted RBP6.62□□□□□ -1.35
CLDN1-202ENST00000490800 FLVCR1Q9Y5Y0 555 aa6.62□□□□□ -1.35
CLDN1-202ENST00000490800 ACANP16112 2415 aa6.61□□□□□ -1.35
CLDN1-202ENST00000490800 PRR32B1ATL7 298 aa6.61□□□□□ -1.35
CLDN1-202ENST00000490800 AKAP8O43823 692 aaKnown RBP6.61□□□□□ -1.35
CLDN1-202ENST00000490800 LALBAP00709 142 aa6.61□□□□□ -1.35
CLDN1-202ENST00000490800 QDPRP09417 244 aa6.61□□□□□ -1.35
CLDN1-202ENST00000490800 HSMCR30P0CW71 290 aa6.61□□□□□ -1.35
CLDN1-202ENST00000490800 GAAP10253 952 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms