RNA–Protein interactions for RNA: ENST00000490696.5

VPS26A-207, Transcript of VPS26, retromer complex component A, humanhuman

TSL 5

Gene VPS26A, Length 800 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-207ENST00000490696 SLC25A16P16260 332 aa13.15□□□□□ -0.3
VPS26A-207ENST00000490696 ZNF823P16415 610 aa13.15□□□□□ -0.3
VPS26A-207ENST00000490696 PCK2Q16822 640 aa13.15□□□□□ -0.3
VPS26A-207ENST00000490696 NKPD1Q17RQ9 610 aa13.15□□□□□ -0.3
VPS26A-207ENST00000490696 ALKBH6Q3KRA9 238 aa13.15□□□□□ -0.3
VPS26A-207ENST00000490696 LINC01590Q5TEZ4 76 aa13.15□□□□□ -0.3
VPS26A-207ENST00000490696 CLEC9AQ6UXN8 241 aa13.15□□□□□ -0.3
VPS26A-207ENST00000490696 HIPK1Q86Z02 1210 aa13.15□□□□□ -0.3
VPS26A-207ENST00000490696 ZNF511Q8NB15 262 aa13.15□□□□□ -0.3
VPS26A-207ENST00000490696 OR2AJ1Q8NGZ0 328 aa13.15□□□□□ -0.3
VPS26A-207ENST00000490696 IPCEF1Q8WWN9 437 aaPredicted RBP13.15□□□□□ -0.3
VPS26A-207ENST00000490696 PTP4A1Q93096 173 aa13.15□□□□□ -0.3
VPS26A-207ENST00000490696 MAP6Q96JE9 813 aa13.15□□□□□ -0.3
VPS26A-207ENST00000490696 DCLRE1CQ96SD1 692 aaKnown RBP13.15□□□□□ -0.3
VPS26A-207ENST00000490696 CDADC1Q9BWV3 514 aa13.15□□□□□ -0.3
VPS26A-207ENST00000490696 POFUT1Q9H488 388 aa13.15□□□□□ -0.3
VPS26A-207ENST00000490696 MED20Q9H944 212 aa13.15□□□□□ -0.3
VPS26A-207ENST00000490696 WDR76Q9H967 626 aa13.15□□□□□ -0.3
VPS26A-207ENST00000490696 SLC25A19Q9HC21 320 aa13.15□□□□□ -0.3
VPS26A-207ENST00000490696 HINT3Q9NQE9 182 aaKnown RBP13.15□□□□□ -0.3
VPS26A-207ENST00000490696 KIF17Q9P2E2 1029 aa13.15□□□□□ -0.3
VPS26A-207ENST00000490696 GPR160Q9UJ42 338 aa13.15□□□□□ -0.3
VPS26A-207ENST00000490696 NSD1Q96L73 2696 aaPredicted RBP13.15□□□□□ -0.31
VPS26A-207ENST00000490696 LOC390937A0A1W2PQ73 354 aa13.14□□□□□ -0.31
VPS26A-207ENST00000490696 VWC2LB2RUY7 222 aa13.14□□□□□ -0.31
VPS26A-207ENST00000490696 G3V2T6 193 aa13.14□□□□□ -0.31
VPS26A-207ENST00000490696 NDUFS8O00217 210 aa13.14□□□□□ -0.31
VPS26A-207ENST00000490696 SURF4O15260 269 aa13.14□□□□□ -0.31
VPS26A-207ENST00000490696 HEXAP06865 529 aa13.14□□□□□ -0.31
VPS26A-207ENST00000490696 TUBG1P23258 451 aa13.14□□□□□ -0.31
VPS26A-207ENST00000490696 GCH1P30793 250 aa13.14□□□□□ -0.31
VPS26A-207ENST00000490696 FMO3P31513 532 aa13.14□□□□□ -0.31
VPS26A-207ENST00000490696 RPS27P42677 84 aaKnown RBP13.14□□□□□ -0.31
VPS26A-207ENST00000490696 CRISP1P54107 249 aa13.14□□□□□ -0.31
VPS26A-207ENST00000490696 KRTAP1-1Q07627 177 aa13.14□□□□□ -0.31
VPS26A-207ENST00000490696 ECH1Q13011 328 aa13.14□□□□□ -0.31
VPS26A-207ENST00000490696 KPNB1Q14974 876 aaKnown RBP13.14□□□□□ -0.31
VPS26A-207ENST00000490696 MOGQ16653 247 aa13.14□□□□□ -0.31
VPS26A-207ENST00000490696 OR10S1Q8NGN2 331 aa13.14□□□□□ -0.31
VPS26A-207ENST00000490696 OR6K6Q8NGW6 343 aa13.14□□□□□ -0.31
VPS26A-207ENST00000490696 UBASH3BQ8TF42 649 aa13.14□□□□□ -0.31
VPS26A-207ENST00000490696 PYDC1Q8WXC3 89 aa13.14□□□□□ -0.31
VPS26A-207ENST00000490696 GTF3AQ92664 365 aaKnown RBP13.14□□□□□ -0.31
VPS26A-207ENST00000490696 PITX2Q99697 317 aa13.14□□□□□ -0.31
VPS26A-207ENST00000490696 GABARAPL1Q9H0R8 117 aa13.14□□□□□ -0.31
VPS26A-207ENST00000490696 TUBG2Q9NRH3 451 aa13.14□□□□□ -0.31
VPS26A-207ENST00000490696 STARD10Q9Y365 291 aa13.14□□□□□ -0.31
VPS26A-207ENST00000490696 C17orf100A8MU93 164 aa13.13□□□□□ -0.31
VPS26A-207ENST00000490696 J3QW42 95 aa13.13□□□□□ -0.31
VPS26A-207ENST00000490696 NCR1O76036 304 aa13.13□□□□□ -0.31
VPS26A-207ENST00000490696 HPXP02790 462 aa13.13□□□□□ -0.31
VPS26A-207ENST00000490696 ZNF23P17027 643 aa13.13□□□□□ -0.31
VPS26A-207ENST00000490696 ENTPD1P49961 510 aa13.13□□□□□ -0.31
VPS26A-207ENST00000490696 MMP15P51511 669 aa13.13□□□□□ -0.31
VPS26A-207ENST00000490696 BLVRAP53004 296 aa13.13□□□□□ -0.31
VPS26A-207ENST00000490696 LOXL1Q08397 574 aaPredicted RBP13.13□□□□□ -0.31
VPS26A-207ENST00000490696 PSG7Q13046 419 aa13.13□□□□□ -0.31
VPS26A-207ENST00000490696 TEX30Q5JUR7 227 aa13.13□□□□□ -0.31
VPS26A-207ENST00000490696 TMEM236Q5W0B7 351 aa13.13□□□□□ -0.31
VPS26A-207ENST00000490696 KDM4DQ6B0I6 523 aa13.13□□□□□ -0.31
VPS26A-207ENST00000490696 TMEM154Q6P9G4 183 aa13.13□□□□□ -0.31
VPS26A-207ENST00000490696 ZDHHC13Q8IUH4 622 aa13.13□□□□□ -0.31
VPS26A-207ENST00000490696 ZNF786Q8N393 782 aa13.13□□□□□ -0.31
VPS26A-207ENST00000490696 SNX33Q8WV41 574 aa13.13□□□□□ -0.31
VPS26A-207ENST00000490696 CENPNQ96H22 339 aaPredicted RBP13.13□□□□□ -0.31
VPS26A-207ENST00000490696 ATF6BQ99941 703 aa13.13□□□□□ -0.31
VPS26A-207ENST00000490696 SEMA6AQ9H2E6 1030 aa13.13□□□□□ -0.31
VPS26A-207ENST00000490696 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.13□□□□□ -0.31
VPS26A-207ENST00000490696 HIVEP2P31629 2446 aa13.13□□□□□ -0.31
VPS26A-207ENST00000490696 FN1P02751 2386 aaKnown RBP13.13□□□□□ -0.31
VPS26A-207ENST00000490696 H3BNX3 289 aa13.12□□□□□ -0.31
VPS26A-207ENST00000490696 ZNF593O00488 134 aaPredicted RBP13.12□□□□□ -0.31
VPS26A-207ENST00000490696 MITFO75030 526 aaPredicted RBP13.12□□□□□ -0.31
VPS26A-207ENST00000490696 GLCEO94923 617 aa13.12□□□□□ -0.31
VPS26A-207ENST00000490696 ACSM4P0C7M7 580 aa13.12□□□□□ -0.31
VPS26A-207ENST00000490696 PAICSP22234 425 aaKnown RBP13.12□□□□□ -0.31
VPS26A-207ENST00000490696 GIFP27352 417 aa13.12□□□□□ -0.31
VPS26A-207ENST00000490696 NR4A2P43354 598 aa13.12□□□□□ -0.31
VPS26A-207ENST00000490696 MAGEB1P43366 347 aa13.12□□□□□ -0.31
VPS26A-207ENST00000490696 RGS6P49758 472 aa13.12□□□□□ -0.31
VPS26A-207ENST00000490696 ESRRGP62508 458 aa13.12□□□□□ -0.31
VPS26A-207ENST00000490696 CARTPTQ16568 116 aa13.12□□□□□ -0.31
VPS26A-207ENST00000490696 PLBD1Q6P4A8 553 aa13.12□□□□□ -0.31
VPS26A-207ENST00000490696 COLCA1Q6ZS62 124 aa13.12□□□□□ -0.31
VPS26A-207ENST00000490696 Q71RC1 249 aaPredicted RBP13.12□□□□□ -0.31
VPS26A-207ENST00000490696 APOBEC3DQ96AK3 386 aaPredicted RBP13.12□□□□□ -0.31
VPS26A-207ENST00000490696 OTULINQ96BN8 352 aa13.12□□□□□ -0.31
VPS26A-207ENST00000490696 COG8Q96MW5 612 aa13.12□□□□□ -0.31
VPS26A-207ENST00000490696 PIMREGQ9BSJ6 248 aa13.12□□□□□ -0.31
VPS26A-207ENST00000490696 OR51V1Q9H2C8 321 aa13.12□□□□□ -0.31
VPS26A-207ENST00000490696 MARCH7Q9H992 704 aa13.12□□□□□ -0.31
VPS26A-207ENST00000490696 KRT84Q9NSB2 600 aa13.12□□□□□ -0.31
VPS26A-207ENST00000490696 DDX28Q9NUL7 540 aaKnown RBP13.12□□□□□ -0.31
VPS26A-207ENST00000490696 NKIRAS2Q9NYR9 191 aa13.12□□□□□ -0.31
VPS26A-207ENST00000490696 NIPBLQ6KC79 2804 aaeCLIP13.11□□□□□ -0.31
VPS26A-207ENST00000490696 ZSCAN5BA6NJL1 495 aa13.11□□□□□ -0.31
VPS26A-207ENST00000490696 PRR23D1E9PI22 279 aaPredicted RBP13.11□□□□□ -0.31
VPS26A-207ENST00000490696 F5H5K5 113 aa13.11□□□□□ -0.31
VPS26A-207ENST00000490696 LYNX1G3V0Z9 82 aa13.11□□□□□ -0.31
VPS26A-207ENST00000490696 MT-ND5P03915 603 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms