RNA–Protein interactions for RNA: ENST00000490163.5

UBXN4-208, Transcript of UBX domain protein 4, humanhuman

TSL 2

Gene UBXN4, Length 3,394 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-208ENST00000490163 PRLHRP49683 370 aa2.39□□□□□ -2.03
UBXN4-208ENST00000490163 RAB4BP61018 213 aa2.39□□□□□ -2.03
UBXN4-208ENST00000490163 TFAMQ00059 246 aaKnown RBP2.39□□□□□ -2.03
UBXN4-208ENST00000490163 EMC2Q15006 297 aa2.39□□□□□ -2.03
UBXN4-208ENST00000490163 MLF2Q15773 248 aaPredicted RBP2.39□□□□□ -2.03
UBXN4-208ENST00000490163 ZNF404Q494X3 552 aa2.39□□□□□ -2.03
UBXN4-208ENST00000490163 Q5BKY6 102 aa2.39□□□□□ -2.03
UBXN4-208ENST00000490163 RBM48Q5RL73 367 aaKnown RBP2.39□□□□□ -2.03
UBXN4-208ENST00000490163 TPRG1LQ5T0D9 272 aa2.39□□□□□ -2.03
UBXN4-208ENST00000490163 SYPL2Q5VXT5 272 aa2.39□□□□□ -2.03
UBXN4-208ENST00000490163 ADNP2Q6IQ32 1131 aa2.39□□□□□ -2.03
UBXN4-208ENST00000490163 Q6ZRG5 221 aa2.39□□□□□ -2.03
UBXN4-208ENST00000490163 RASSF6Q6ZTQ3 369 aa2.39□□□□□ -2.03
UBXN4-208ENST00000490163 RD3Q7Z3Z2 195 aa2.39□□□□□ -2.03
UBXN4-208ENST00000490163 SLC47A2Q86VL8 602 aa2.39□□□□□ -2.03
UBXN4-208ENST00000490163 PDIK1LQ8N165 341 aa2.39□□□□□ -2.03
UBXN4-208ENST00000490163 PROKR2Q8NFJ6 384 aa2.39□□□□□ -2.03
UBXN4-208ENST00000490163 RCN3Q96D15 328 aa2.39□□□□□ -2.03
UBXN4-208ENST00000490163 RNF2Q99496 336 aa2.39□□□□□ -2.03
UBXN4-208ENST00000490163 PIGUQ9H490 435 aa2.39□□□□□ -2.03
UBXN4-208ENST00000490163 KIR3DX1Q9H7L2 352 aa2.39□□□□□ -2.03
UBXN4-208ENST00000490163 NIT2Q9NQR4 276 aa2.39□□□□□ -2.03
UBXN4-208ENST00000490163 INPP5EQ9NRR6 644 aa2.39□□□□□ -2.03
UBXN4-208ENST00000490163 ZNF275Q9NSD4 429 aaPredicted RBP2.39□□□□□ -2.03
UBXN4-208ENST00000490163 DUS2Q9NX74 493 aaKnown RBP2.39□□□□□ -2.03
UBXN4-208ENST00000490163 CMTM6Q9NX76 183 aa2.39□□□□□ -2.03
UBXN4-208ENST00000490163 THUMPD1Q9NXG2 353 aaKnown RBP2.39□□□□□ -2.03
UBXN4-208ENST00000490163 ABCD2Q9UBJ2 740 aa2.39□□□□□ -2.03
UBXN4-208ENST00000490163 ACOT9Q9Y305 439 aa2.39□□□□□ -2.03
UBXN4-208ENST00000490163 AUP1Q9Y679 476 aa2.39□□□□□ -2.03
UBXN4-208ENST00000490163 ALPK3Q96L96 1907 aa2.39□□□□□ -2.03
UBXN4-208ENST00000490163 COL4A4P53420 1690 aaPredicted RBP2.39□□□□□ -2.03
UBXN4-208ENST00000490163 KIAA1671Q9BY89 1806 aa2.39□□□□□ -2.03
UBXN4-208ENST00000490163 COL4A6Q14031 1691 aa2.38□□□□□ -2.03
UBXN4-208ENST00000490163 SERPINE3A8MV23 424 aa2.38□□□□□ -2.03
UBXN4-208ENST00000490163 KRBOX1C9JBD0 128 aa2.38□□□□□ -2.03
UBXN4-208ENST00000490163 WWP2O00308 870 aa2.38□□□□□ -2.03
UBXN4-208ENST00000490163 SOCS2O14508 198 aa2.38□□□□□ -2.03
UBXN4-208ENST00000490163 FPGTO14772 594 aa2.38□□□□□ -2.03
UBXN4-208ENST00000490163 B4GALT5O43286 388 aa2.38□□□□□ -2.03
UBXN4-208ENST00000490163 CCNB2O95067 398 aa2.38□□□□□ -2.03
UBXN4-208ENST00000490163 GABARAPO95166 117 aa2.38□□□□□ -2.03
UBXN4-208ENST00000490163 C1QBP02746 253 aa2.38□□□□□ -2.03
UBXN4-208ENST00000490163 S100A8P05109 93 aa2.38□□□□□ -2.03
UBXN4-208ENST00000490163 SERPINE1P05121 402 aa2.38□□□□□ -2.03
UBXN4-208ENST00000490163 RNF224P0DH78 156 aa2.38□□□□□ -2.03
UBXN4-208ENST00000490163 ZP3P21754 424 aa2.38□□□□□ -2.03
UBXN4-208ENST00000490163 POU3F4P49335 361 aa2.38□□□□□ -2.03
UBXN4-208ENST00000490163 PSG5Q15238 335 aa2.38□□□□□ -2.03
UBXN4-208ENST00000490163 LRRC26Q2I0M4 334 aa2.38□□□□□ -2.03
UBXN4-208ENST00000490163 PARP15Q460N3 678 aa2.38□□□□□ -2.03
UBXN4-208ENST00000490163 EIPR1Q53HC9 387 aa2.38□□□□□ -2.03
UBXN4-208ENST00000490163 PAN3Q58A45 887 aaKnown RBP2.38□□□□□ -2.03
UBXN4-208ENST00000490163 PIGGQ5H8A4 983 aa2.38□□□□□ -2.03
UBXN4-208ENST00000490163 TMPRSS11AQ6ZMR5 421 aa2.38□□□□□ -2.03
UBXN4-208ENST00000490163 C17orf107Q6ZR85 190 aa2.38□□□□□ -2.03
UBXN4-208ENST00000490163 ZCCHC23Q6ZST2 131 aa2.38□□□□□ -2.03
UBXN4-208ENST00000490163 NDUFAF7Q7L592 441 aa2.38□□□□□ -2.03
UBXN4-208ENST00000490163 DPY19L4Q7Z388 723 aa2.38□□□□□ -2.03
UBXN4-208ENST00000490163 VTCN1Q7Z7D3 282 aa2.38□□□□□ -2.03
UBXN4-208ENST00000490163 IFNEQ86WN2 208 aa2.38□□□□□ -2.03
UBXN4-208ENST00000490163 TCTE3Q8IZS6 198 aa2.38□□□□□ -2.03
UBXN4-208ENST00000490163 C8orf59Q8N0T1 100 aaPredicted RBP2.38□□□□□ -2.03
UBXN4-208ENST00000490163 LINC01561Q8N1V8 128 aa2.38□□□□□ -2.03
UBXN4-208ENST00000490163 CSNK1A1LQ8N752 337 aa2.38□□□□□ -2.03
UBXN4-208ENST00000490163 TPRX1Q8N7U7 411 aa2.38□□□□□ -2.03
UBXN4-208ENST00000490163 B3GNT7Q8NFL0 401 aa2.38□□□□□ -2.03
UBXN4-208ENST00000490163 PLPPR1Q8TBJ4 325 aa2.38□□□□□ -2.03
UBXN4-208ENST00000490163 SSC4DQ8WTU2 575 aa2.38□□□□□ -2.03
UBXN4-208ENST00000490163 EXOSC8Q96B26 276 aaKnown RBP2.38□□□□□ -2.03
UBXN4-208ENST00000490163 SEH1LQ96EE3 360 aa2.38□□□□□ -2.03
UBXN4-208ENST00000490163 RNF170Q96K19 258 aa2.38□□□□□ -2.03
UBXN4-208ENST00000490163 C2orf48Q96LS8 159 aa2.38□□□□□ -2.03
UBXN4-208ENST00000490163 PFDN5Q99471 154 aa2.38□□□□□ -2.03
UBXN4-208ENST00000490163 KCNS3Q9BQ31 491 aa2.38□□□□□ -2.03
UBXN4-208ENST00000490163 RBM4Q9BWF3 364 aaKnown RBP2.38□□□□□ -2.03
UBXN4-208ENST00000490163 ELOVL4Q9GZR5 314 aa2.38□□□□□ -2.03
UBXN4-208ENST00000490163 GAL3ST2Q9H3Q3 398 aa2.38□□□□□ -2.03
UBXN4-208ENST00000490163 NMRAL1Q9HBL8 299 aa2.38□□□□□ -2.03
UBXN4-208ENST00000490163 DCAF13Q9NV06 445 aaKnown RBP2.38□□□□□ -2.03
UBXN4-208ENST00000490163 IMP3Q9NV31 184 aaKnown RBP2.38□□□□□ -2.03
UBXN4-208ENST00000490163 PAK1IP1Q9NWT1 392 aaPredicted RBP2.38□□□□□ -2.03
UBXN4-208ENST00000490163 KLHL21Q9UJP4 597 aa2.38□□□□□ -2.03
UBXN4-208ENST00000490163 RALYQ9UKM9 306 aaKnown RBP2.38□□□□□ -2.03
UBXN4-208ENST00000490163 ING4Q9UNL4 249 aa2.38□□□□□ -2.03
UBXN4-208ENST00000490163 NCKAP1Q9Y2A7 1128 aa2.38□□□□□ -2.03
UBXN4-208ENST00000490163 PAM16Q9Y3D7 125 aa2.38□□□□□ -2.03
UBXN4-208ENST00000490163 HSPE1-MOB4S4R3N1 261 aa2.38□□□□□ -2.03
UBXN4-208ENST00000490163 MICAL3Q7RTP6 2002 aa2.38□□□□□ -2.03
UBXN4-208ENST00000490163 A0A1B0GW55 424 aa2.38□□□□□ -2.03
UBXN4-208ENST00000490163 PQLC2LA1A4F0 135 aa2.38□□□□□ -2.03
UBXN4-208ENST00000490163 RNF212BA8MTL3 300 aa2.38□□□□□ -2.03
UBXN4-208ENST00000490163 CLIC3O95833 236 aa2.38□□□□□ -2.03
UBXN4-208ENST00000490163 FADS2O95864 444 aaKnown RBP2.38□□□□□ -2.03
UBXN4-208ENST00000490163 BPGMP07738 259 aa2.38□□□□□ -2.03
UBXN4-208ENST00000490163 DUX4L2P0CJ85 424 aa2.38□□□□□ -2.03
UBXN4-208ENST00000490163 DUX4L3P0CJ86 424 aa2.38□□□□□ -2.03
UBXN4-208ENST00000490163 DUX4L4P0CJ87 422 aa2.38□□□□□ -2.03
UBXN4-208ENST00000490163 DUX4L5P0CJ88 424 aa2.38□□□□□ -2.03
UBXN4-208ENST00000490163 DUX4L6P0CJ89 424 aa2.38□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms