RNA–Protein interactions for RNA: ENST00000490035.6

LSAMP-205, Transcript of limbic system associated membrane protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSAMP, Length 9,446 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-205ENST00000490035 NDRG3Q9UGV2 375 aa8.07□□□□□ -1.12
LSAMP-205ENST00000490035 SCN2AQ99250 2005 aa8.07□□□□□ -1.12
LSAMP-205ENST00000490035 PPP6CO00743 305 aa8.07□□□□□ -1.12
LSAMP-205ENST00000490035 SOCS6O14544 535 aa8.07□□□□□ -1.12
LSAMP-205ENST00000490035 TBXA2RP21731 343 aa8.07□□□□□ -1.12
LSAMP-205ENST00000490035 CD1CP29017 333 aa8.07□□□□□ -1.12
LSAMP-205ENST00000490035 BTG2P78543 158 aa8.07□□□□□ -1.12
LSAMP-205ENST00000490035 HOXC5Q00444 222 aa8.07□□□□□ -1.12
LSAMP-205ENST00000490035 EXD3Q8N9H8 876 aa8.07□□□□□ -1.12
LSAMP-205ENST00000490035 SLC37A2Q8TED4 501 aa8.07□□□□□ -1.12
LSAMP-205ENST00000490035 PAPPAQ13219 1627 aa8.07□□□□□ -1.12
LSAMP-205ENST00000490035 CDC14CA4D256 554 aa8.07□□□□□ -1.12
LSAMP-205ENST00000490035 PRSS44E7EML9 344 aa8.07□□□□□ -1.12
LSAMP-205ENST00000490035 SDHBP21912 280 aa8.07□□□□□ -1.12
LSAMP-205ENST00000490035 GPR12P47775 334 aa8.07□□□□□ -1.12
LSAMP-205ENST00000490035 BATFQ16520 125 aa8.07□□□□□ -1.12
LSAMP-205ENST00000490035 SMIM21Q3B7S5 101 aa8.07□□□□□ -1.12
LSAMP-205ENST00000490035 SFT2D1Q8WV19 159 aa8.07□□□□□ -1.12
LSAMP-205ENST00000490035 SPSB1Q96BD6 273 aa8.07□□□□□ -1.12
LSAMP-205ENST00000490035 CALHM2Q9HA72 323 aa8.07□□□□□ -1.12
LSAMP-205ENST00000490035 MARCH5Q9NX47 278 aa8.07□□□□□ -1.12
LSAMP-205ENST00000490035 PLXNA1Q9UIW2 1896 aa8.07□□□□□ -1.12
LSAMP-205ENST00000490035 PRSS37A4D1T9 235 aa8.07□□□□□ -1.12
LSAMP-205ENST00000490035 NRASP01111 189 aa8.07□□□□□ -1.12
LSAMP-205ENST00000490035 F2RP25116 425 aa8.07□□□□□ -1.12
LSAMP-205ENST00000490035 VEGFBP49765 207 aa8.07□□□□□ -1.12
LSAMP-205ENST00000490035 TRA2AQ13595 282 aaKnown RBP eCLIP8.07□□□□□ -1.12
LSAMP-205ENST00000490035 RNF212Q495C1 297 aa8.07□□□□□ -1.12
LSAMP-205ENST00000490035 LIPNQ5VXI9 398 aa8.07□□□□□ -1.12
LSAMP-205ENST00000490035 OR5M10Q6IEU7 315 aa8.07□□□□□ -1.12
LSAMP-205ENST00000490035 FAHD1Q6P587 224 aa8.07□□□□□ -1.12
LSAMP-205ENST00000490035 DEGS2Q6QHC5 323 aa8.07□□□□□ -1.12
LSAMP-205ENST00000490035 LINC01465Q8N7H1 131 aa8.07□□□□□ -1.12
LSAMP-205ENST00000490035 CRLF2Q9HC73 371 aa8.07□□□□□ -1.12
LSAMP-205ENST00000490035 UFSP2Q9NUQ7 469 aa8.07□□□□□ -1.12
LSAMP-205ENST00000490035 YIF1AO95070 293 aa8.07□□□□□ -1.12
LSAMP-205ENST00000490035 ARRB2P32121 409 aa8.07□□□□□ -1.12
LSAMP-205ENST00000490035 RSPO2Q6UXX9 243 aaPredicted RBP8.07□□□□□ -1.12
LSAMP-205ENST00000490035 IL34Q6ZMJ4 242 aa8.07□□□□□ -1.12
LSAMP-205ENST00000490035 SHISA6Q6ZSJ9 500 aa8.07□□□□□ -1.12
LSAMP-205ENST00000490035 OR10Z1Q8NGY1 313 aa8.07□□□□□ -1.12
LSAMP-205ENST00000490035 SLC39A7Q92504 469 aa8.07□□□□□ -1.12
LSAMP-205ENST00000490035 SLAMF6Q96DU3 332 aa8.07□□□□□ -1.12
LSAMP-205ENST00000490035 SLC35D1Q9NTN3 355 aa8.07□□□□□ -1.12
LSAMP-205ENST00000490035 ZNF586Q9NXT0 402 aa8.07□□□□□ -1.12
LSAMP-205ENST00000490035 ZIC2O95409 532 aaPredicted RBP8.07□□□□□ -1.12
LSAMP-205ENST00000490035 KIR2DS2P43631 304 aa8.07□□□□□ -1.12
LSAMP-205ENST00000490035 FUT6P51993 359 aa8.07□□□□□ -1.12
LSAMP-205ENST00000490035 NLRC3Q7RTR2 1065 aa8.07□□□□□ -1.12
LSAMP-205ENST00000490035 SSX8Q7RTT4 187 aa8.07□□□□□ -1.12
LSAMP-205ENST00000490035 ZDHHC22Q8N966 263 aa8.07□□□□□ -1.12
LSAMP-205ENST00000490035 NUDT22Q9BRQ3 303 aa8.07□□□□□ -1.12
LSAMP-205ENST00000490035 TMPRSS5Q9H3S3 457 aa8.07□□□□□ -1.12
LSAMP-205ENST00000490035 TAS2R5Q9NYW4 299 aa8.07□□□□□ -1.12
LSAMP-205ENST00000490035 MMP17Q9ULZ9 603 aa8.07□□□□□ -1.12
LSAMP-205ENST00000490035 FLVCR1Q9Y5Y0 555 aa8.07□□□□□ -1.12
LSAMP-205ENST00000490035 RGPD3A6NKT7 1758 aaPredicted RBP8.07□□□□□ -1.12
LSAMP-205ENST00000490035 TRBV5-4A0A0C4DH59 114 aa8.07□□□□□ -1.12
LSAMP-205ENST00000490035 M0R135 149 aa8.07□□□□□ -1.12
LSAMP-205ENST00000490035 ERV3-1Q14264 604 aa8.07□□□□□ -1.12
LSAMP-205ENST00000490035 OXA1LQ15070 435 aa8.07□□□□□ -1.12
LSAMP-205ENST00000490035 TRNP1Q6NT89 227 aa8.07□□□□□ -1.12
LSAMP-205ENST00000490035 MAVSQ7Z434 540 aa8.07□□□□□ -1.12
LSAMP-205ENST00000490035 SLC16A11Q8NCK7 471 aa8.07□□□□□ -1.12
LSAMP-205ENST00000490035 ZNF799Q96GE5 643 aa8.07□□□□□ -1.12
LSAMP-205ENST00000490035 MAP6Q96JE9 813 aa8.07□□□□□ -1.12
LSAMP-205ENST00000490035 SUCNR1Q9BXA5 334 aa8.07□□□□□ -1.12
LSAMP-205ENST00000490035 GALR2O43603 387 aaPredicted RBP8.07□□□□□ -1.12
LSAMP-205ENST00000490035 PGA3P0DJD8 388 aa8.07□□□□□ -1.12
LSAMP-205ENST00000490035 MDH2P40926 338 aaKnown RBP8.07□□□□□ -1.12
LSAMP-205ENST00000490035 TMEM229BQ8NBD8 167 aa8.07□□□□□ -1.12
LSAMP-205ENST00000490035 DOK4Q8TEW6 326 aa8.07□□□□□ -1.12
LSAMP-205ENST00000490035 GPR78Q96P69 363 aa8.07□□□□□ -1.12
LSAMP-205ENST00000490035 TBX19O60806 448 aa8.06□□□□□ -1.12
LSAMP-205ENST00000490035 ETFRF1Q6IPR1 90 aa8.06□□□□□ -1.12
LSAMP-205ENST00000490035 SLC7A5P1Q8MH63 180 aa8.06□□□□□ -1.12
LSAMP-205ENST00000490035 TRIB1Q96RU8 372 aa8.06□□□□□ -1.12
LSAMP-205ENST00000490035 C20orf27Q9GZN8 174 aa8.06□□□□□ -1.12
LSAMP-205ENST00000490035 ICE1Q9Y2F5 2266 aa8.06□□□□□ -1.12
LSAMP-205ENST00000490035 CBR3O75828 277 aa8.06□□□□□ -1.12
LSAMP-205ENST00000490035 HOXC4P09017 264 aaPredicted RBP8.06□□□□□ -1.12
LSAMP-205ENST00000490035 LIMS3P0CW19 117 aa8.06□□□□□ -1.12
LSAMP-205ENST00000490035 LIMS4P0CW20 117 aa8.06□□□□□ -1.12
LSAMP-205ENST00000490035 OMGP23515 440 aa8.06□□□□□ -1.12
LSAMP-205ENST00000490035 RPS19P39019 145 aaKnown RBP8.06□□□□□ -1.12
LSAMP-205ENST00000490035 GABRA4P48169 554 aa8.06□□□□□ -1.12
LSAMP-205ENST00000490035 OR10A3P58181 314 aa8.06□□□□□ -1.12
LSAMP-205ENST00000490035 SMAD4Q13485 552 aaKnown RBP8.06□□□□□ -1.12
LSAMP-205ENST00000490035 OR2W3Q7Z3T1 314 aa8.06□□□□□ -1.12
LSAMP-205ENST00000490035 OR51S1Q8NGJ8 323 aa8.06□□□□□ -1.12
LSAMP-205ENST00000490035 NTNG2Q96CW9 530 aa8.06□□□□□ -1.12
LSAMP-205ENST00000490035 ZNF845Q96IR2 970 aaPredicted RBP8.06□□□□□ -1.12
LSAMP-205ENST00000490035 CSAG2Q9Y5P2 127 aa8.06□□□□□ -1.12
LSAMP-205ENST00000490035 ANKRD61A6NGH8 418 aa8.06□□□□□ -1.12
LSAMP-205ENST00000490035 SEC14L6B5MCN3 397 aa8.06□□□□□ -1.12
LSAMP-205ENST00000490035 H7BYZ3 331 aa8.06□□□□□ -1.12
LSAMP-205ENST00000490035 RRASP10301 218 aa8.06□□□□□ -1.12
LSAMP-205ENST00000490035 THBS4P35443 961 aa8.06□□□□□ -1.12
LSAMP-205ENST00000490035 SLC25A1P53007 311 aa8.06□□□□□ -1.12
LSAMP-205ENST00000490035 FCN2Q15485 313 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms