RNA–Protein interactions for RNA: ENST00000489862.1

DEPDC1-204, Transcript of DEP domain containing 1, humanhuman

TSL 1 (best)

Gene DEPDC1, Length 1,613 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-204ENST00000489862 BARHL1Q9BZE3 327 aa2.54□□□□□ -2
DEPDC1-204ENST00000489862 CHIAQ9BZP6 476 aa2.54□□□□□ -2
DEPDC1-204ENST00000489862 UBE2ZQ9H832 354 aaPredicted RBP2.54□□□□□ -2
DEPDC1-204ENST00000489862 FKRPQ9H9S5 495 aa2.54□□□□□ -2
DEPDC1-204ENST00000489862 NMUR1Q9HB89 426 aa2.54□□□□□ -2
DEPDC1-204ENST00000489862 MRM3Q9HC36 420 aaKnown RBP2.54□□□□□ -2
DEPDC1-204ENST00000489862 NLE1Q9NVX2 485 aaPredicted RBP2.54□□□□□ -2
DEPDC1-204ENST00000489862 SEC14L4Q9UDX3 406 aa2.54□□□□□ -2
DEPDC1-204ENST00000489862 CPQQ9Y646 472 aa2.54□□□□□ -2
DEPDC1-204ENST00000489862 TRPM7Q96QT4 1865 aa2.54□□□□□ -2
DEPDC1-204ENST00000489862 IGHV3-38A0A0C4DH36 116 aa2.53□□□□□ -2
DEPDC1-204ENST00000489862 A0A0D9SFI3 127 aa2.53□□□□□ -2
DEPDC1-204ENST00000489862 CENPXA8MT69 81 aa2.53□□□□□ -2
DEPDC1-204ENST00000489862 F8VP50 259 aa2.53□□□□□ -2
DEPDC1-204ENST00000489862 hCG_2039718K7EN88 272 aa2.53□□□□□ -2
DEPDC1-204ENST00000489862 K7EQG2 157 aa2.53□□□□□ -2
DEPDC1-204ENST00000489862 CCL21O00585 134 aa2.53□□□□□ -2
DEPDC1-204ENST00000489862 SGCEO43556 437 aa2.53□□□□□ -2
DEPDC1-204ENST00000489862 ENSAO43768 121 aaKnown RBP2.53□□□□□ -2
DEPDC1-204ENST00000489862 MAGEC1O60732 1142 aa2.53□□□□□ -2
DEPDC1-204ENST00000489862 RAMP1O60894 148 aa2.53□□□□□ -2
DEPDC1-204ENST00000489862 MPDU1O75352 247 aa2.53□□□□□ -2
DEPDC1-204ENST00000489862 HSBP1O75506 76 aa2.53□□□□□ -2
DEPDC1-204ENST00000489862 GPX5O75715 221 aa2.53□□□□□ -2
DEPDC1-204ENST00000489862 IGHV2-5P01817 119 aa2.53□□□□□ -2
DEPDC1-204ENST00000489862 LGALS2P05162 132 aa2.53□□□□□ -2
DEPDC1-204ENST00000489862 PATE4P0C8F1 98 aa2.53□□□□□ -2
DEPDC1-204ENST00000489862 MLNP12872 115 aa2.53□□□□□ -2
DEPDC1-204ENST00000489862 MYOGP15173 224 aa2.53□□□□□ -2
DEPDC1-204ENST00000489862 BCL3P20749 454 aa2.53□□□□□ -2
DEPDC1-204ENST00000489862 FASP25445 335 aa2.53□□□□□ -2
DEPDC1-204ENST00000489862 RFC3P40938 356 aa2.53□□□□□ -2
DEPDC1-204ENST00000489862 HOXA1P49639 335 aaPredicted RBP2.53□□□□□ -2
DEPDC1-204ENST00000489862 FBXW4P57775 412 aa2.53□□□□□ -2
DEPDC1-204ENST00000489862 GAGE5Q13069 117 aa2.53□□□□□ -2
DEPDC1-204ENST00000489862 GAGE6Q13070 117 aa2.53□□□□□ -2
DEPDC1-204ENST00000489862 DGCR6Q14129 220 aa2.53□□□□□ -2
DEPDC1-204ENST00000489862 CCL14Q16627 93 aa2.53□□□□□ -2
DEPDC1-204ENST00000489862 NSUN5P1Q3KNT7 163 aa2.53□□□□□ -2
DEPDC1-204ENST00000489862 ZNF876PQ49A33 203 aa2.53□□□□□ -2
DEPDC1-204ENST00000489862 ACTL10Q5JWF8 245 aa2.53□□□□□ -2
DEPDC1-204ENST00000489862 TMEM31Q5JXX7 168 aa2.53□□□□□ -2
DEPDC1-204ENST00000489862 VAX1Q5SQQ9 334 aa2.53□□□□□ -2
DEPDC1-204ENST00000489862 FAHD1Q6P587 224 aa2.53□□□□□ -2
DEPDC1-204ENST00000489862 FAM151BQ6UXP7 276 aa2.53□□□□□ -2
DEPDC1-204ENST00000489862 STOX1Q6ZVD7 989 aa2.53□□□□□ -2
DEPDC1-204ENST00000489862 FAM19A1Q7Z5A9 133 aa2.53□□□□□ -2
DEPDC1-204ENST00000489862 TRPT1Q86TN4 253 aaKnown RBP2.53□□□□□ -2
DEPDC1-204ENST00000489862 ZNF589Q86UQ0 364 aaPredicted RBP2.53□□□□□ -2
DEPDC1-204ENST00000489862 UNC93AQ86WB7 457 aa2.53□□□□□ -2
DEPDC1-204ENST00000489862 CARM1Q86X55 608 aa2.53□□□□□ -2
DEPDC1-204ENST00000489862 CBLN2Q8IUK8 224 aa2.53□□□□□ -2
DEPDC1-204ENST00000489862 ENTHD1Q8IYW4 607 aa2.53□□□□□ -2
DEPDC1-204ENST00000489862 TMEM178AQ8NBL3 297 aa2.53□□□□□ -2
DEPDC1-204ENST00000489862 TTLQ8NG68 377 aa2.53□□□□□ -2
DEPDC1-204ENST00000489862 OR10G8Q8NGN5 311 aa2.53□□□□□ -2
DEPDC1-204ENST00000489862 ITFG1Q8TB96 612 aa2.53□□□□□ -2
DEPDC1-204ENST00000489862 SDR42E1Q8WUS8 393 aa2.53□□□□□ -2
DEPDC1-204ENST00000489862 WDR34Q96EX3 536 aa2.53□□□□□ -2
DEPDC1-204ENST00000489862 ZNF488Q96MN9 340 aa2.53□□□□□ -2
DEPDC1-204ENST00000489862 ZNF251Q9BRH9 671 aa2.53□□□□□ -2
DEPDC1-204ENST00000489862 CABLES2Q9BTV7 478 aa2.53□□□□□ -2
DEPDC1-204ENST00000489862 C9orf16Q9BUW7 83 aa2.53□□□□□ -2
DEPDC1-204ENST00000489862 ZYG11BQ9C0D3 744 aa2.53□□□□□ -2
DEPDC1-204ENST00000489862 SYT4Q9H2B2 425 aa2.53□□□□□ -2
DEPDC1-204ENST00000489862 TMEM38AQ9H6F2 299 aa2.53□□□□□ -2
DEPDC1-204ENST00000489862 DMAP1Q9NPF5 467 aaPredicted RBP2.53□□□□□ -2
DEPDC1-204ENST00000489862 CLN6Q9NWW5 311 aa2.53□□□□□ -2
DEPDC1-204ENST00000489862 ELOVL2Q9NXB9 296 aa2.53□□□□□ -2
DEPDC1-204ENST00000489862 THAP10Q9P2Z0 257 aaPredicted RBP2.53□□□□□ -2
DEPDC1-204ENST00000489862 Q9UF83 564 aa2.53□□□□□ -2
DEPDC1-204ENST00000489862 TP53BP1Q12888 1972 aaPredicted RBP2.53□□□□□ -2
DEPDC1-204ENST00000489862 LAMA2P24043 3122 aaKnown RBP2.53□□□□□ -2
DEPDC1-204ENST00000489862 STK36Q9NRP7 1315 aa2.53□□□□□ -2
DEPDC1-204ENST00000489862 OTOFQ9HC10 1997 aa2.53□□□□□ -2
DEPDC1-204ENST00000489862 ECM29Q5VYK3 1845 aa2.53□□□□□ -2
DEPDC1-204ENST00000489862 IGKV3D-15A0A087WSY6 115 aa2.53□□□□□ -2
DEPDC1-204ENST00000489862 TRBV7-9A0A0J9YWB2 115 aa2.53□□□□□ -2
DEPDC1-204ENST00000489862 CCDC182A6NF36 153 aa2.53□□□□□ -2
DEPDC1-204ENST00000489862 BLOC1S5-TXNDC5H3BN57 136 aa2.53□□□□□ -2
DEPDC1-204ENST00000489862 SULT2B1O00204 365 aa2.53□□□□□ -2
DEPDC1-204ENST00000489862 AP2A2O94973 939 aa2.53□□□□□ -2
DEPDC1-204ENST00000489862 LYPLA2O95372 231 aa2.53□□□□□ -2
DEPDC1-204ENST00000489862 LDOC1O95751 146 aaPredicted RBP2.53□□□□□ -2
DEPDC1-204ENST00000489862 CSNK2A2P19784 350 aaPredicted RBP2.53□□□□□ -2
DEPDC1-204ENST00000489862 SERPINA2P20848 420 aa2.53□□□□□ -2
DEPDC1-204ENST00000489862 PDHA2P29803 388 aa2.53□□□□□ -2
DEPDC1-204ENST00000489862 OR1D4P47884 311 aa2.53□□□□□ -2
DEPDC1-204ENST00000489862 CSNK1DP48730 415 aa2.53□□□□□ -2
DEPDC1-204ENST00000489862 EMDP50402 254 aa2.53□□□□□ -2
DEPDC1-204ENST00000489862 XKP51811 444 aa2.53□□□□□ -2
DEPDC1-204ENST00000489862 MFAP2P55001 183 aa2.53□□□□□ -2
DEPDC1-204ENST00000489862 PRPS1P60891 318 aa2.53□□□□□ -2
DEPDC1-204ENST00000489862 TSPAN5P62079 268 aa2.53□□□□□ -2
DEPDC1-204ENST00000489862 FADDQ13158 208 aa2.53□□□□□ -2
DEPDC1-204ENST00000489862 ORC2Q13416 577 aaPredicted RBP2.53□□□□□ -2
DEPDC1-204ENST00000489862 TAL2Q16559 108 aa2.53□□□□□ -2
DEPDC1-204ENST00000489862 SGCAQ16586 387 aa2.53□□□□□ -2
DEPDC1-204ENST00000489862 UPP1Q16831 310 aa2.53□□□□□ -2
DEPDC1-204ENST00000489862 CCDC14Q49A88 953 aa2.53□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms