RNA–Protein interactions for RNA: ENST00000489712.6

NF1-213, Transcript of neurofibromin 1, humanhuman

TSL 4

Gene NF1, Length 543 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-213ENST00000489712 MICU1Q9BPX6 476 aa1.72□□□□□ -2.13
NF1-213ENST00000489712 CHMP4BQ9H444 224 aaKnown RBP1.72□□□□□ -2.13
NF1-213ENST00000489712 CWH43Q9H720 699 aa1.72□□□□□ -2.13
NF1-213ENST00000489712 BEX1Q9HBH7 125 aa1.72□□□□□ -2.13
NF1-213ENST00000489712 VCX3AQ9NNX9 186 aa1.72□□□□□ -2.13
NF1-213ENST00000489712 KCNJ16Q9NPI9 418 aa1.72□□□□□ -2.13
NF1-213ENST00000489712 AGPAT4Q9NRZ5 378 aa1.72□□□□□ -2.13
NF1-213ENST00000489712 ZNF835Q9Y2P0 537 aa1.72□□□□□ -2.13
NF1-213ENST00000489712 YARS2Q9Y2Z4 477 aaKnown RBP1.72□□□□□ -2.13
NF1-213ENST00000489712 KPTNQ9Y664 436 aa1.72□□□□□ -2.13
NF1-213ENST00000489712 EIF4G1Q04637 1599 aaKnown RBP1.72□□□□□ -2.13
NF1-213ENST00000489712 NEURL4Q96JN8 1562 aa1.72□□□□□ -2.13
NF1-213ENST00000489712 MTCL1Q9Y4B5 1905 aaKnown RBP1.72□□□□□ -2.13
NF1-213ENST00000489712 MAP3K15Q6ZN16 1313 aa1.71□□□□□ -2.14
NF1-213ENST00000489712 CENPJQ9HC77 1338 aaPredicted RBP1.71□□□□□ -2.14
NF1-213ENST00000489712 TSPAN11A1L157 253 aa1.71□□□□□ -2.14
NF1-213ENST00000489712 PDZK1P1A8MUH7 402 aa1.71□□□□□ -2.14
NF1-213ENST00000489712 SCAMP2O15127 329 aaKnown RBP1.71□□□□□ -2.14
NF1-213ENST00000489712 CETN3O15182 167 aa1.71□□□□□ -2.14
NF1-213ENST00000489712 SIVA1O15304 175 aa1.71□□□□□ -2.14
NF1-213ENST00000489712 KDELR3O43731 214 aa1.71□□□□□ -2.14
NF1-213ENST00000489712 SLC19A2O60779 497 aa1.71□□□□□ -2.14
NF1-213ENST00000489712 SCELO95171 688 aa1.71□□□□□ -2.14
NF1-213ENST00000489712 CD160O95971 181 aa1.71□□□□□ -2.14
NF1-213ENST00000489712 MOSP00540 346 aa1.71□□□□□ -2.14
NF1-213ENST00000489712 ARG1P05089 322 aa1.71□□□□□ -2.14
NF1-213ENST00000489712 DCNP07585 359 aaKnown RBP1.71□□□□□ -2.14
NF1-213ENST00000489712 GIPP09681 153 aaPredicted RBP1.71□□□□□ -2.14
NF1-213ENST00000489712 CSF3P09919 207 aa1.71□□□□□ -2.14
NF1-213ENST00000489712 GKN3PP0CG01 181 aa1.71□□□□□ -2.14
NF1-213ENST00000489712 ZNF286BP0CG31 522 aa1.71□□□□□ -2.14
NF1-213ENST00000489712 PNMA6AP0CW24 399 aaPredicted RBP1.71□□□□□ -2.14
NF1-213ENST00000489712 CT45A6P0DMU7 189 aa1.71□□□□□ -2.14
NF1-213ENST00000489712 CT45A5P0DMU8 189 aa1.71□□□□□ -2.14
NF1-213ENST00000489712 CT45A7P0DMV0 189 aa1.71□□□□□ -2.14
NF1-213ENST00000489712 F2RP25116 425 aa1.71□□□□□ -2.14
NF1-213ENST00000489712 ARR3P36575 388 aa1.71□□□□□ -2.14
NF1-213ENST00000489712 RFC3P40938 356 aa1.71□□□□□ -2.14
NF1-213ENST00000489712 VSX2P58304 361 aaPredicted RBP1.71□□□□□ -2.14
NF1-213ENST00000489712 UBE2MP61081 183 aaKnown RBP1.71□□□□□ -2.14
NF1-213ENST00000489712 PSMC5P62195 406 aa1.71□□□□□ -2.14
NF1-213ENST00000489712 RCAN2Q14206 197 aa1.71□□□□□ -2.14
NF1-213ENST00000489712 GPR176Q14439 515 aa1.71□□□□□ -2.14
NF1-213ENST00000489712 VAMP3Q15836 100 aa1.71□□□□□ -2.14
NF1-213ENST00000489712 DEFB116Q30KQ4 102 aa1.71□□□□□ -2.14
NF1-213ENST00000489712 TRMT5Q32P41 509 aaKnown RBP1.71□□□□□ -2.14
NF1-213ENST00000489712 ZBED5Q49AG3 693 aa1.71□□□□□ -2.14
NF1-213ENST00000489712 HSP90B2PQ58FF3 399 aa1.71□□□□□ -2.14
NF1-213ENST00000489712 CT45A1Q5HYN5 189 aa1.71□□□□□ -2.14
NF1-213ENST00000489712 COA6Q5JTJ3 125 aaKnown RBP1.71□□□□□ -2.14
NF1-213ENST00000489712 TPRG1LQ5T0D9 272 aa1.71□□□□□ -2.14
NF1-213ENST00000489712 UBE2UQ5VVX9 321 aa1.71□□□□□ -2.14
NF1-213ENST00000489712 RWDD4Q6NW29 188 aaKnown RBP1.71□□□□□ -2.14
NF1-213ENST00000489712 SLC35D2Q76EJ3 337 aa1.71□□□□□ -2.14
NF1-213ENST00000489712 UNC93AQ86WB7 457 aa1.71□□□□□ -2.14
NF1-213ENST00000489712 RBM45Q8IUH3 476 aaKnown RBP1.71□□□□□ -2.14
NF1-213ENST00000489712 TRAM1L1Q8N609 369 aa1.71□□□□□ -2.14
NF1-213ENST00000489712 NKAPP1Q8N9T2 125 aa1.71□□□□□ -2.14
NF1-213ENST00000489712 MNS1Q8NEH6 495 aa1.71□□□□□ -2.14
NF1-213ENST00000489712 VN1R2Q8NFZ6 395 aa1.71□□□□□ -2.14
NF1-213ENST00000489712 OR4A15Q8NGL6 344 aa1.71□□□□□ -2.14
NF1-213ENST00000489712 OR2A1Q8NGT9 310 aa1.71□□□□□ -2.14
NF1-213ENST00000489712 OR10R2Q8NGX6 335 aa1.71□□□□□ -2.14
NF1-213ENST00000489712 CT45A3Q8NHU0 189 aa1.71□□□□□ -2.14
NF1-213ENST00000489712 NDNFQ8TB73 568 aa1.71□□□□□ -2.14
NF1-213ENST00000489712 TCP10LQ8TDR4 215 aa1.71□□□□□ -2.14
NF1-213ENST00000489712 GEMIN6Q8WXD5 167 aaKnown RBP1.71□□□□□ -2.14
NF1-213ENST00000489712 FGF14Q92915 247 aa1.71□□□□□ -2.14
NF1-213ENST00000489712 CCDC124Q96CT7 223 aaKnown RBP1.71□□□□□ -2.14
NF1-213ENST00000489712 CALN1Q9BXU9 219 aa1.71□□□□□ -2.14
NF1-213ENST00000489712 DEFB129Q9H1M3 183 aa1.71□□□□□ -2.14
NF1-213ENST00000489712 C20orf85Q9H1P6 137 aa1.71□□□□□ -2.14
NF1-213ENST00000489712 OR2AG1Q9H205 316 aa1.71□□□□□ -2.14
NF1-213ENST00000489712 TPK1Q9H3S4 243 aa1.71□□□□□ -2.14
NF1-213ENST00000489712 LHX9Q9NQ69 397 aa1.71□□□□□ -2.14
NF1-213ENST00000489712 ZMAT5Q9UDW3 170 aaKnown RBP1.71□□□□□ -2.14
NF1-213ENST00000489712 GMEB1Q9Y692 573 aa1.71□□□□□ -2.14
NF1-213ENST00000489712 RLFQ13129 1914 aa1.71□□□□□ -2.14
NF1-213ENST00000489712 MAPK8IP3Q9UPT6 1336 aa1.7□□□□□ -2.14
NF1-213ENST00000489712 TRAV39A0A0B4J263 110 aa1.7□□□□□ -2.14
NF1-213ENST00000489712 A0A1B0GW55 424 aa1.7□□□□□ -2.14
NF1-213ENST00000489712 XKRYO14609 159 aa1.7□□□□□ -2.14
NF1-213ENST00000489712 SLC9A3R1O14745 358 aaPredicted RBP1.7□□□□□ -2.14
NF1-213ENST00000489712 SLC31A2O15432 143 aa1.7□□□□□ -2.14
NF1-213ENST00000489712 RAD51CO43502 376 aa1.7□□□□□ -2.14
NF1-213ENST00000489712 MPDU1O75352 247 aa1.7□□□□□ -2.14
NF1-213ENST00000489712 SMC2O95347 1197 aa1.7□□□□□ -2.14
NF1-213ENST00000489712 AIFM1O95831 613 aa1.7□□□□□ -2.14
NF1-213ENST00000489712 RETP07949 1114 aa1.7□□□□□ -2.14
NF1-213ENST00000489712 MRPL3P09001 348 aaKnown RBP1.7□□□□□ -2.14
NF1-213ENST00000489712 DUX4L2P0CJ85 424 aa1.7□□□□□ -2.14
NF1-213ENST00000489712 DUX4L3P0CJ86 424 aa1.7□□□□□ -2.14
NF1-213ENST00000489712 DUX4L5P0CJ88 424 aa1.7□□□□□ -2.14
NF1-213ENST00000489712 DUX4L6P0CJ89 424 aa1.7□□□□□ -2.14
NF1-213ENST00000489712 DUX4L7P0CJ90 424 aa1.7□□□□□ -2.14
NF1-213ENST00000489712 ICAM2P13598 275 aa1.7□□□□□ -2.14
NF1-213ENST00000489712 GFAPP14136 432 aa1.7□□□□□ -2.14
NF1-213ENST00000489712 WARSP23381 471 aaKnown RBP1.7□□□□□ -2.14
NF1-213ENST00000489712 OR1E1P30953 314 aa1.7□□□□□ -2.14
NF1-213ENST00000489712 HOXA9P31269 272 aa1.7□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms