RNA–Protein interactions for RNA: ENST00000489485.5

CLDN11-209, Transcript of claudin 11, humanhuman

TSL 2

Gene CLDN11, Length 1,854 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-209ENST00000489485 ISG20L2Q9H9L3 353 aaKnown RBP12.4□□□□□ -0.42
CLDN11-209ENST00000489485 NGBQ9NPG2 151 aa12.4□□□□□ -0.42
CLDN11-209ENST00000489485 CRIM1Q9NZV1 1036 aa12.4□□□□□ -0.42
CLDN11-209ENST00000489485 CADP27708 2225 aa12.39□□□□□ -0.43
CLDN11-209ENST00000489485 IQCMA0A1B0GVH7 501 aa12.39□□□□□ -0.43
CLDN11-209ENST00000489485 M0R1B8 84 aa12.39□□□□□ -0.43
CLDN11-209ENST00000489485 DOK2O60496 412 aa12.39□□□□□ -0.43
CLDN11-209ENST00000489485 MRPS14O60783 128 aaKnown RBP12.39□□□□□ -0.43
CLDN11-209ENST00000489485 PTHP01270 115 aa12.39□□□□□ -0.43
CLDN11-209ENST00000489485 IGKV3-15P01624 115 aa12.39□□□□□ -0.43
CLDN11-209ENST00000489485 CELA3BP08861 270 aa12.39□□□□□ -0.43
CLDN11-209ENST00000489485 CBR1P16152 277 aa12.39□□□□□ -0.43
CLDN11-209ENST00000489485 IGFBP2P18065 325 aa12.39□□□□□ -0.43
CLDN11-209ENST00000489485 OR12D2P58182 307 aa12.39□□□□□ -0.43
CLDN11-209ENST00000489485 IRF3Q14653 427 aa12.39□□□□□ -0.43
CLDN11-209ENST00000489485 MED22Q15528 200 aa12.39□□□□□ -0.43
CLDN11-209ENST00000489485 NEDD8Q15843 81 aa12.39□□□□□ -0.43
CLDN11-209ENST00000489485 TP53I3Q53FA7 332 aa12.39□□□□□ -0.43
CLDN11-209ENST00000489485 LRRN1Q6UXK5 716 aa12.39□□□□□ -0.43
CLDN11-209ENST00000489485 KCTD8Q6ZWB6 473 aa12.39□□□□□ -0.43
CLDN11-209ENST00000489485 NANOGP1Q8N7R0 232 aa12.39□□□□□ -0.43
CLDN11-209ENST00000489485 GATAD2BQ8WXI9 593 aa12.39□□□□□ -0.43
CLDN11-209ENST00000489485 MOV10Q9HCE1 1003 aaKnown RBP12.39□□□□□ -0.43
CLDN11-209ENST00000489485 ACOT13Q9NPJ3 140 aa12.39□□□□□ -0.43
CLDN11-209ENST00000489485 CENPMQ9NSP4 180 aa12.39□□□□□ -0.43
CLDN11-209ENST00000489485 NPAP1Q9NZP6 1156 aa12.39□□□□□ -0.43
CLDN11-209ENST00000489485 IKZF2Q9UKS7 526 aa12.39□□□□□ -0.43
CLDN11-209ENST00000489485 J3QLW9 94 aa12.38□□□□□ -0.43
CLDN11-209ENST00000489485 PHYHO14832 338 aa12.38□□□□□ -0.43
CLDN11-209ENST00000489485 EPXP11678 715 aa12.38□□□□□ -0.43
CLDN11-209ENST00000489485 ZNF19P17023 458 aa12.38□□□□□ -0.43
CLDN11-209ENST00000489485 PCMT1P22061 227 aa12.38□□□□□ -0.43
CLDN11-209ENST00000489485 APEX1P27695 318 aaKnown RBP12.38□□□□□ -0.43
CLDN11-209ENST00000489485 C1QTNF12Q5T7M4 302 aa12.38□□□□□ -0.43
CLDN11-209ENST00000489485 RNLSQ5VYX0 342 aa12.38□□□□□ -0.43
CLDN11-209ENST00000489485 PLEKHG7Q6ZR37 379 aa12.38□□□□□ -0.43
CLDN11-209ENST00000489485 KRT77Q7Z794 578 aa12.38□□□□□ -0.43
CLDN11-209ENST00000489485 KLHL36Q8N4N3 616 aa12.38□□□□□ -0.43
CLDN11-209ENST00000489485 SVOPQ8N4V2 548 aa12.38□□□□□ -0.43
CLDN11-209ENST00000489485 CPEB3Q8NE35 698 aaKnown RBP12.38□□□□□ -0.43
CLDN11-209ENST00000489485 OR10S1Q8NGN2 331 aa12.38□□□□□ -0.43
CLDN11-209ENST00000489485 SLAMF6Q96DU3 332 aa12.38□□□□□ -0.43
CLDN11-209ENST00000489485 C4orf36Q96KX1 117 aa12.38□□□□□ -0.43
CLDN11-209ENST00000489485 OR5M11Q96RB7 305 aa12.38□□□□□ -0.43
CLDN11-209ENST00000489485 MND1Q9BWT6 205 aa12.38□□□□□ -0.43
CLDN11-209ENST00000489485 MROQ9BYG7 248 aa12.38□□□□□ -0.43
CLDN11-209ENST00000489485 WNT5BQ9H1J7 359 aa12.38□□□□□ -0.43
CLDN11-209ENST00000489485 SLCO1C1Q9NYB5 712 aa12.38□□□□□ -0.43
CLDN11-209ENST00000489485 GNG8Q9UK08 70 aa12.38□□□□□ -0.43
CLDN11-209ENST00000489485 TMEM129A0AVI4 362 aa12.38□□□□□ -0.43
CLDN11-209ENST00000489485 SERPINA5P05154 406 aa12.38□□□□□ -0.43
CLDN11-209ENST00000489485 LCKP06239 509 aa12.38□□□□□ -0.43
CLDN11-209ENST00000489485 CCNOP22674 350 aa12.38□□□□□ -0.43
CLDN11-209ENST00000489485 ACTA2P62736 377 aa12.38□□□□□ -0.43
CLDN11-209ENST00000489485 ACTG2P63267 376 aa12.38□□□□□ -0.43
CLDN11-209ENST00000489485 EGR3Q06889 387 aa12.38□□□□□ -0.43
CLDN11-209ENST00000489485 CDONQ4KMG0 1287 aa12.38□□□□□ -0.43
CLDN11-209ENST00000489485 CCDC92Q53HC0 331 aaPredicted RBP12.38□□□□□ -0.43
CLDN11-209ENST00000489485 ELFN2Q5R3F8 820 aa12.38□□□□□ -0.43
CLDN11-209ENST00000489485 XAF1Q6GPH4 301 aa12.38□□□□□ -0.43
CLDN11-209ENST00000489485 KCTD18Q6PI47 426 aaPredicted RBP12.38□□□□□ -0.43
CLDN11-209ENST00000489485 SEZ6L2Q6UXD5 910 aa12.38□□□□□ -0.43
CLDN11-209ENST00000489485 TMPRSS11AQ6ZMR5 421 aa12.38□□□□□ -0.43
CLDN11-209ENST00000489485 VASH1Q7L8A9 365 aaPredicted RBP12.38□□□□□ -0.43
CLDN11-209ENST00000489485 MYPOPQ86VE0 399 aaPredicted RBP12.38□□□□□ -0.43
CLDN11-209ENST00000489485 ZNF584Q8IVC4 421 aa12.38□□□□□ -0.43
CLDN11-209ENST00000489485 SPRYD4Q8WW59 207 aaPredicted RBP12.38□□□□□ -0.43
CLDN11-209ENST00000489485 ASB17Q8WXJ9 295 aa12.38□□□□□ -0.43
CLDN11-209ENST00000489485 ZNF75AQ96N20 296 aa12.38□□□□□ -0.43
CLDN11-209ENST00000489485 CAB39Q9Y376 341 aaPredicted RBP12.38□□□□□ -0.43
CLDN11-209ENST00000489485 IGHV1-18A0A0C4DH31 117 aa12.37□□□□□ -0.43
CLDN11-209ENST00000489485 TFAP2AP05549 437 aa12.37□□□□□ -0.43
CLDN11-209ENST00000489485 KRT8P05787 483 aa12.37□□□□□ -0.43
CLDN11-209ENST00000489485 CCL2P13500 99 aa12.37□□□□□ -0.43
CLDN11-209ENST00000489485 ZNF14P17017 642 aaPredicted RBP12.37□□□□□ -0.43
CLDN11-209ENST00000489485 STOMP27105 288 aa12.37□□□□□ -0.43
CLDN11-209ENST00000489485 HTR5AP47898 357 aa12.37□□□□□ -0.43
CLDN11-209ENST00000489485 WNT4P56705 351 aa12.37□□□□□ -0.43
CLDN11-209ENST00000489485 HIST1H3AP68431 136 aa12.37□□□□□ -0.43
CLDN11-209ENST00000489485 DOC2BQ14184 412 aa12.37□□□□□ -0.43
CLDN11-209ENST00000489485 RAB35Q15286 201 aa12.37□□□□□ -0.43
CLDN11-209ENST00000489485 TAF13Q15543 124 aa12.37□□□□□ -0.43
CLDN11-209ENST00000489485 TBCEQ15813 527 aaPredicted RBP12.37□□□□□ -0.43
CLDN11-209ENST00000489485 HIST2H3PS2Q5TEC6 136 aa12.37□□□□□ -0.43
CLDN11-209ENST00000489485 SP5Q6BEB4 398 aaPredicted RBP12.37□□□□□ -0.43
CLDN11-209ENST00000489485 TMEM108Q6UXF1 575 aa12.37□□□□□ -0.43
CLDN11-209ENST00000489485 HIST2H3AQ71DI3 136 aa12.37□□□□□ -0.43
CLDN11-209ENST00000489485 ZNF679Q8IYX0 411 aa12.37□□□□□ -0.43
CLDN11-209ENST00000489485 SLC30A7Q8NEW0 376 aa12.37□□□□□ -0.43
CLDN11-209ENST00000489485 RNF133Q8WVZ7 376 aa12.37□□□□□ -0.43
CLDN11-209ENST00000489485 OR8B4Q96RC9 309 aa12.37□□□□□ -0.43
CLDN11-209ENST00000489485 HDHD2Q9H0R4 259 aa12.37□□□□□ -0.43
CLDN11-209ENST00000489485 ELOVL3Q9HB03 270 aa12.37□□□□□ -0.43
CLDN11-209ENST00000489485 PNRC2Q9NPJ4 139 aaKnown RBP12.37□□□□□ -0.43
CLDN11-209ENST00000489485 ACOXLQ9NUZ1 547 aa12.37□□□□□ -0.43
CLDN11-209ENST00000489485 CRNNQ9UBG3 495 aaPredicted RBP12.37□□□□□ -0.43
CLDN11-209ENST00000489485 MRM2Q9UI43 246 aaKnown RBP12.37□□□□□ -0.43
CLDN11-209ENST00000489485 FBXL3Q9UKT7 428 aa12.37□□□□□ -0.43
CLDN11-209ENST00000489485 ABCA4P78363 2273 aa12.37□□□□□ -0.43
CLDN11-209ENST00000489485 TRIM64CA6NLI5 447 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms