RNA–Protein interactions for RNA: ENST00000489352.5

HDAC6-233, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 585 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-233ENST00000489352 HIST1H2ABP04908 130 aa9.29□□□□□ -0.92
HDAC6-233ENST00000489352 MYF6P23409 242 aa9.29□□□□□ -0.92
HDAC6-233ENST00000489352 PAX6P26367 422 aa9.29□□□□□ -0.92
HDAC6-233ENST00000489352 GSK3BP49841 420 aa9.29□□□□□ -0.92
HDAC6-233ENST00000489352 ERFP50548 548 aa9.29□□□□□ -0.92
HDAC6-233ENST00000489352 CRISP3P54108 245 aa9.29□□□□□ -0.92
HDAC6-233ENST00000489352 LGALS4P56470 323 aa9.29□□□□□ -0.92
HDAC6-233ENST00000489352 TMEM95Q3KNT9 176 aa9.29□□□□□ -0.92
HDAC6-233ENST00000489352 COLCA1Q6ZS62 124 aa9.29□□□□□ -0.92
HDAC6-233ENST00000489352 HIST3H2AQ7L7L0 130 aa9.29□□□□□ -0.92
HDAC6-233ENST00000489352 OVCH2Q7RTZ1 564 aa9.29□□□□□ -0.92
HDAC6-233ENST00000489352 CELF2-AS1Q8N7Q2 184 aa9.29□□□□□ -0.92
HDAC6-233ENST00000489352 LY6G5BQ8NDX9 201 aa9.29□□□□□ -0.92
HDAC6-233ENST00000489352 OR5L1Q8NGL2 311 aa9.29□□□□□ -0.92
HDAC6-233ENST00000489352 AENQ8WTP8 325 aaKnown RBP9.29□□□□□ -0.92
HDAC6-233ENST00000489352 TWIST2Q8WVJ9 160 aa9.29□□□□□ -0.92
HDAC6-233ENST00000489352 HIST1H2ACQ93077 130 aa9.29□□□□□ -0.92
HDAC6-233ENST00000489352 TEX37Q96LM6 180 aa9.29□□□□□ -0.92
HDAC6-233ENST00000489352 ECSITQ9BQ95 431 aa9.29□□□□□ -0.92
HDAC6-233ENST00000489352 METTL8Q9H825 291 aaKnown RBP9.29□□□□□ -0.92
HDAC6-233ENST00000489352 ABCB10Q9NRK6 738 aa9.29□□□□□ -0.92
HDAC6-233ENST00000489352 ZKSCAN7Q9P0L1 754 aaPredicted RBP9.29□□□□□ -0.92
HDAC6-233ENST00000489352 P2RX2Q9UBL9 471 aa9.29□□□□□ -0.92
HDAC6-233ENST00000489352 CHST2Q9Y4C5 530 aa9.29□□□□□ -0.92
HDAC6-233ENST00000489352 CAPN7Q9Y6W3 813 aa9.29□□□□□ -0.92
HDAC6-233ENST00000489352 TMEM247A6NEH6 219 aa9.28□□□□□ -0.92
HDAC6-233ENST00000489352 MLNRO43193 412 aa9.28□□□□□ -0.92
HDAC6-233ENST00000489352 MT-ATP6P00846 226 aa9.28□□□□□ -0.92
HDAC6-233ENST00000489352 HLA-DPB1P04440 258 aa9.28□□□□□ -0.92
HDAC6-233ENST00000489352 THBS3P49746 956 aa9.28□□□□□ -0.92
HDAC6-233ENST00000489352 VEGFCP49767 419 aa9.28□□□□□ -0.92
HDAC6-233ENST00000489352 RAB25P57735 213 aa9.28□□□□□ -0.92
HDAC6-233ENST00000489352 NCALDP61601 193 aa9.28□□□□□ -0.92
HDAC6-233ENST00000489352 RABL3Q5HYI8 236 aa9.28□□□□□ -0.92
HDAC6-233ENST00000489352 CLEC12AQ5QGZ9 265 aa9.28□□□□□ -0.92
HDAC6-233ENST00000489352 FAM27BQ5VT28 67 aa9.28□□□□□ -0.92
HDAC6-233ENST00000489352 ZYG11AQ6WRX3 759 aa9.28□□□□□ -0.92
HDAC6-233ENST00000489352 HDDC2Q7Z4H3 204 aa9.28□□□□□ -0.92
HDAC6-233ENST00000489352 TMEM219Q86XT9 240 aa9.28□□□□□ -0.92
HDAC6-233ENST00000489352 Q8N7P7 452 aa9.28□□□□□ -0.92
HDAC6-233ENST00000489352 CCDC63Q8NA47 563 aa9.28□□□□□ -0.92
HDAC6-233ENST00000489352 NOXO1Q8NFA2 376 aa9.28□□□□□ -0.92
HDAC6-233ENST00000489352 IL17DQ8TAD2 202 aa9.28□□□□□ -0.92
HDAC6-233ENST00000489352 H1FXQ92522 213 aaKnown RBP9.28□□□□□ -0.92
HDAC6-233ENST00000489352 PTTG3PQ9NZH4 202 aa9.28□□□□□ -0.92
HDAC6-233ENST00000489352 ZNF180Q9UJW8 692 aa9.28□□□□□ -0.92
HDAC6-233ENST00000489352 SORL1Q92673 2214 aa9.27□□□□□ -0.93
HDAC6-233ENST00000489352 A0A1W2PRG6 482 aa9.27□□□□□ -0.93
HDAC6-233ENST00000489352 NDUFB3O43676 98 aa9.27□□□□□ -0.93
HDAC6-233ENST00000489352 SLC2A10O95528 541 aa9.27□□□□□ -0.93
HDAC6-233ENST00000489352 BCHEP06276 602 aa9.27□□□□□ -0.93
HDAC6-233ENST00000489352 CST2P09228 141 aa9.27□□□□□ -0.93
HDAC6-233ENST00000489352 LAP3P28838 519 aa9.27□□□□□ -0.93
HDAC6-233ENST00000489352 CLDN8P56748 225 aa9.27□□□□□ -0.93
HDAC6-233ENST00000489352 BLCAPP62952 87 aa9.27□□□□□ -0.93
HDAC6-233ENST00000489352 HOXA4Q00056 320 aaPredicted RBP9.27□□□□□ -0.93
HDAC6-233ENST00000489352 POU4F2Q12837 409 aa9.27□□□□□ -0.93
HDAC6-233ENST00000489352 MAD2L1Q13257 205 aaPredicted RBP9.27□□□□□ -0.93
HDAC6-233ENST00000489352 NPTX1Q15818 432 aa9.27□□□□□ -0.93
HDAC6-233ENST00000489352 HIST3H3Q16695 136 aa9.27□□□□□ -0.93
HDAC6-233ENST00000489352 C6orf136Q5SQH8 315 aa9.27□□□□□ -0.93
HDAC6-233ENST00000489352 C10orf128Q5T292 105 aa9.27□□□□□ -0.93
HDAC6-233ENST00000489352 C9orf66Q5T8R8 295 aa9.27□□□□□ -0.93
HDAC6-233ENST00000489352 PRAMEF6Q5VXH4 476 aa9.27□□□□□ -0.93
HDAC6-233ENST00000489352 KANK2Q63ZY3 851 aa9.27□□□□□ -0.93
HDAC6-233ENST00000489352 FAM91A1Q658Y4 838 aa9.27□□□□□ -0.93
HDAC6-233ENST00000489352 RANBP3LQ86VV4 465 aaPredicted RBP9.27□□□□□ -0.93
HDAC6-233ENST00000489352 SLC30A8Q8IWU4 369 aa9.27□□□□□ -0.93
HDAC6-233ENST00000489352 C10orf111Q8N326 155 aa9.27□□□□□ -0.93
HDAC6-233ENST00000489352 LSMEM1Q8N8F7 131 aa9.27□□□□□ -0.93
HDAC6-233ENST00000489352 OR8J2Q8NGG1 315 aa9.27□□□□□ -0.93
HDAC6-233ENST00000489352 RPS4Y2Q8TD47 263 aa9.27□□□□□ -0.93
HDAC6-233ENST00000489352 TNFRSF14Q92956 283 aa9.27□□□□□ -0.93
HDAC6-233ENST00000489352 SLC35B4Q969S0 331 aa9.27□□□□□ -0.93
HDAC6-233ENST00000489352 NABP1Q96AH0 204 aa9.27□□□□□ -0.93
HDAC6-233ENST00000489352 EDA2RQ9HAV5 297 aa9.27□□□□□ -0.93
HDAC6-233ENST00000489352 DCDC2Q9UHG0 476 aa9.27□□□□□ -0.93
HDAC6-233ENST00000489352 TCF19Q9Y242 345 aa9.27□□□□□ -0.93
HDAC6-233ENST00000489352 ZNF256Q9Y2P7 627 aaPredicted RBP9.27□□□□□ -0.93
HDAC6-233ENST00000489352 MUC4Q99102 2169 aa9.26□□□□□ -0.93
HDAC6-233ENST00000489352 A0A1W2PQ09 198 aa9.26□□□□□ -0.93
HDAC6-233ENST00000489352 GMNCA6NCL1 334 aa9.26□□□□□ -0.93
HDAC6-233ENST00000489352 C12orf71A8MTZ7 269 aa9.26□□□□□ -0.93
HDAC6-233ENST00000489352 NUDT19A8MXV4 375 aa9.26□□□□□ -0.93
HDAC6-233ENST00000489352 G3V2L1 256 aa9.26□□□□□ -0.93
HDAC6-233ENST00000489352 H0YAE9 185 aa9.26□□□□□ -0.93
HDAC6-233ENST00000489352 LY6G6CO95867 125 aa9.26□□□□□ -0.93
HDAC6-233ENST00000489352 SERPINE1P05121 402 aa9.26□□□□□ -0.93
HDAC6-233ENST00000489352 NR2C1P13056 603 aa9.26□□□□□ -0.93
HDAC6-233ENST00000489352 POU1F1P28069 291 aa9.26□□□□□ -0.93
HDAC6-233ENST00000489352 RAB13P51153 203 aa9.26□□□□□ -0.93
HDAC6-233ENST00000489352 RAD23AP54725 363 aa9.26□□□□□ -0.93
HDAC6-233ENST00000489352 DNAJB13P59910 316 aa9.26□□□□□ -0.93
HDAC6-233ENST00000489352 CD47Q08722 323 aa9.26□□□□□ -0.93
HDAC6-233ENST00000489352 MAB21L1Q13394 359 aa9.26□□□□□ -0.93
HDAC6-233ENST00000489352 MPPED2Q15777 294 aa9.26□□□□□ -0.93
HDAC6-233ENST00000489352 PLA1AQ53H76 456 aa9.26□□□□□ -0.93
HDAC6-233ENST00000489352 SLC36A1Q7Z2H8 476 aa9.26□□□□□ -0.93
HDAC6-233ENST00000489352 CREG2Q8IUH2 290 aa9.26□□□□□ -0.93
HDAC6-233ENST00000489352 OR52H1Q8NGJ2 320 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 85.5 ms