RNA–Protein interactions for RNA: ENST00000488973.6

HMG20B-213, Transcript of high mobility group 20B, humanhuman

TSL 1 (best)

Gene HMG20B, Length 2,434 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-213ENST00000488973 KXD1Q9BQD3 176 aa17.5■□□□□ 0.39
HMG20B-213ENST00000488973 CPAMD8Q8IZJ3 1885 aa17.5■□□□□ 0.39
HMG20B-213ENST00000488973 SMAD9O15198 467 aaKnown RBP17.5■□□□□ 0.39
HMG20B-213ENST00000488973 FGF16O43320 207 aa17.5■□□□□ 0.39
HMG20B-213ENST00000488973 UTS2O95399 124 aa17.5■□□□□ 0.39
HMG20B-213ENST00000488973 HSD17B7P56937 341 aa17.5■□□□□ 0.39
HMG20B-213ENST00000488973 YPEL5P62699 121 aa17.5■□□□□ 0.39
HMG20B-213ENST00000488973 ATXN7L3Q14CW9 347 aaPredicted RBP17.5■□□□□ 0.39
HMG20B-213ENST00000488973 MOGAT2Q3SYC2 334 aa17.5■□□□□ 0.39
HMG20B-213ENST00000488973 C1orf100Q5SVJ3 147 aa17.5■□□□□ 0.39
HMG20B-213ENST00000488973 ZNF813Q6ZN06 617 aa17.5■□□□□ 0.39
HMG20B-213ENST00000488973 GPBAR1Q8TDU6 330 aa17.5■□□□□ 0.39
HMG20B-213ENST00000488973 SLC37A2Q8TED4 501 aa17.5■□□□□ 0.39
HMG20B-213ENST00000488973 PHB2Q99623 299 aa17.5■□□□□ 0.39
HMG20B-213ENST00000488973 NUDT9Q9BW91 350 aa17.5■□□□□ 0.39
HMG20B-213ENST00000488973 NKX2-4Q9H2Z4 354 aa17.5■□□□□ 0.39
HMG20B-213ENST00000488973 ZMAT3Q9HA38 289 aaKnown RBP17.5■□□□□ 0.39
HMG20B-213ENST00000488973 PLEKHA6Q9Y2H5 1048 aa17.5■□□□□ 0.39
HMG20B-213ENST00000488973 CACNA1IQ9P0X4 2223 aa17.49■□□□□ 0.39
HMG20B-213ENST00000488973 KIR2DS5A0A0G2JLQ3 304 aa17.49■□□□□ 0.39
HMG20B-213ENST00000488973 A0A0G2JNG1 304 aa17.49■□□□□ 0.39
HMG20B-213ENST00000488973 C9orf170A2RU37 121 aa17.49■□□□□ 0.39
HMG20B-213ENST00000488973 KIR2DS3K7RE56 304 aa17.49■□□□□ 0.39
HMG20B-213ENST00000488973 EIF1AYO14602 144 aaKnown RBP17.49■□□□□ 0.39
HMG20B-213ENST00000488973 PRKNO60260 465 aaPredicted RBP17.49■□□□□ 0.39
HMG20B-213ENST00000488973 HOXB2P14652 356 aa17.49■□□□□ 0.39
HMG20B-213ENST00000488973 RAB6AP20340 208 aa17.49■□□□□ 0.39
HMG20B-213ENST00000488973 GALNSP34059 522 aa17.49■□□□□ 0.39
HMG20B-213ENST00000488973 EIF1AXP47813 144 aaKnown RBP17.49■□□□□ 0.39
HMG20B-213ENST00000488973 SLC6A8P48029 635 aa17.49■□□□□ 0.39
HMG20B-213ENST00000488973 SPCS3P61009 180 aa17.49■□□□□ 0.39
HMG20B-213ENST00000488973 CXADRP78310 365 aa17.49■□□□□ 0.39
HMG20B-213ENST00000488973 PPP1R1AQ13522 171 aa17.49■□□□□ 0.39
HMG20B-213ENST00000488973 KIR2DS5Q14953 304 aa17.49■□□□□ 0.39
HMG20B-213ENST00000488973 HYAL4Q2M3T9 481 aa17.49■□□□□ 0.39
HMG20B-213ENST00000488973 RNASE10Q5GAN6 216 aaKnown RBP17.49■□□□□ 0.39
HMG20B-213ENST00000488973 OTPQ5XKR4 325 aa17.49■□□□□ 0.39
HMG20B-213ENST00000488973 FAHD2BQ6P2I3 314 aaPredicted RBP17.49■□□□□ 0.39
HMG20B-213ENST00000488973 SFTPA2Q8IWL1 248 aa17.49■□□□□ 0.39
HMG20B-213ENST00000488973 PUSL1Q8N0Z8 303 aaKnown RBP17.49■□□□□ 0.39
HMG20B-213ENST00000488973 AQP3Q92482 292 aa17.49■□□□□ 0.39
HMG20B-213ENST00000488973 FAHD2AQ96GK7 314 aa17.49■□□□□ 0.39
HMG20B-213ENST00000488973 LAT2Q9GZY6 243 aa17.49■□□□□ 0.39
HMG20B-213ENST00000488973 CST11Q9H112 138 aa17.49■□□□□ 0.39
HMG20B-213ENST00000488973 DMRT1Q9Y5R6 373 aa17.49■□□□□ 0.39
HMG20B-213ENST00000488973 ATG2AQ2TAZ0 1938 aa17.49■□□□□ 0.39
HMG20B-213ENST00000488973 DNAH14Q0VDD8 3507 aa17.49■□□□□ 0.39
HMG20B-213ENST00000488973 DCDC2BA2VCK2 349 aa17.49■□□□□ 0.39
HMG20B-213ENST00000488973 TMEM235A6NFC5 223 aa17.49■□□□□ 0.39
HMG20B-213ENST00000488973 OR2AT4A6NND4 320 aa17.49■□□□□ 0.39
HMG20B-213ENST00000488973 C11orf98E9PRG8 122 aa17.49■□□□□ 0.39
HMG20B-213ENST00000488973 CD63P08962 238 aa17.49■□□□□ 0.39
HMG20B-213ENST00000488973 RPL27P61353 136 aaKnown RBP17.49■□□□□ 0.39
HMG20B-213ENST00000488973 RNF4P78317 190 aa17.49■□□□□ 0.39
HMG20B-213ENST00000488973 C19orf47Q8N9M1 422 aaKnown RBP17.49■□□□□ 0.39
HMG20B-213ENST00000488973 OR4S1Q8NGB4 309 aa17.49■□□□□ 0.39
HMG20B-213ENST00000488973 STOML3Q8TAV4 291 aa17.49■□□□□ 0.39
HMG20B-213ENST00000488973 VSX1Q9NZR4 365 aaPredicted RBP17.49■□□□□ 0.39
HMG20B-213ENST00000488973 HHLA2Q9UM44 414 aa17.49■□□□□ 0.39
HMG20B-213ENST00000488973 TRAV36DV7A0A075B6V5 113 aa17.48■□□□□ 0.39
HMG20B-213ENST00000488973 IGLV1-36A0A0B4J1U3 117 aa17.48■□□□□ 0.39
HMG20B-213ENST00000488973 HSFX4A0A1B0GTS1 333 aaPredicted RBP17.48■□□□□ 0.39
HMG20B-213ENST00000488973 HSFX3A0A1B0GWH4 333 aaPredicted RBP17.48■□□□□ 0.39
HMG20B-213ENST00000488973 EPOPA6NHQ4 379 aa17.48■□□□□ 0.39
HMG20B-213ENST00000488973 GPR31O00270 319 aa17.48■□□□□ 0.39
HMG20B-213ENST00000488973 KLK3P07288 261 aaPredicted RBP17.48■□□□□ 0.39
HMG20B-213ENST00000488973 DCNP07585 359 aaKnown RBP17.48■□□□□ 0.39
HMG20B-213ENST00000488973 PPICP45877 212 aa17.48■□□□□ 0.39
HMG20B-213ENST00000488973 ARRB1P49407 418 aaPredicted RBP17.48■□□□□ 0.39
HMG20B-213ENST00000488973 NKPD1Q17RQ9 610 aa17.48■□□□□ 0.39
HMG20B-213ENST00000488973 AVPI1Q5T686 147 aa17.48■□□□□ 0.39
HMG20B-213ENST00000488973 RAB12Q6IQ22 244 aa17.48■□□□□ 0.39
HMG20B-213ENST00000488973 ARMC6Q6NXE6 501 aa17.48■□□□□ 0.39
HMG20B-213ENST00000488973 MAMDC2Q7Z304 686 aaPredicted RBP17.48■□□□□ 0.39
HMG20B-213ENST00000488973 CD163Q86VB7 1156 aa17.48■□□□□ 0.39
HMG20B-213ENST00000488973 ZNF761Q86XN6 746 aaPredicted RBP17.48■□□□□ 0.39
HMG20B-213ENST00000488973 JAGN1Q8N5M9 183 aa17.48■□□□□ 0.39
HMG20B-213ENST00000488973 OR51A2Q8NGJ7 313 aa17.48■□□□□ 0.39
HMG20B-213ENST00000488973 ZNF519Q8TB69 540 aa17.48■□□□□ 0.39
HMG20B-213ENST00000488973 FOXN4Q96NZ1 517 aa17.48■□□□□ 0.39
HMG20B-213ENST00000488973 KLHDC3Q9BQ90 382 aa17.48■□□□□ 0.39
HMG20B-213ENST00000488973 ABHD6Q9BV23 337 aa17.48■□□□□ 0.39
HMG20B-213ENST00000488973 ASF1BQ9NVP2 202 aa17.48■□□□□ 0.39
HMG20B-213ENST00000488973 CBY1Q9Y3M2 126 aa17.48■□□□□ 0.39
HMG20B-213ENST00000488973 LRP12Q9Y561 859 aa17.48■□□□□ 0.39
HMG20B-213ENST00000488973 FREM3P0C091 2139 aa17.48■□□□□ 0.39
HMG20B-213ENST00000488973 TERTO14746 1132 aaKnown RBP17.48■□□□□ 0.39
HMG20B-213ENST00000488973 SLC16A7O60669 478 aa17.48■□□□□ 0.39
HMG20B-213ENST00000488973 NSA2O95478 260 aaKnown RBP17.48■□□□□ 0.39
HMG20B-213ENST00000488973 TNFP01375 233 aa17.48■□□□□ 0.39
HMG20B-213ENST00000488973 CSN2P05814 226 aa17.48■□□□□ 0.39
HMG20B-213ENST00000488973 LIPCP11150 499 aa17.48■□□□□ 0.39
HMG20B-213ENST00000488973 CXCR1P25024 350 aa17.48■□□□□ 0.39
HMG20B-213ENST00000488973 DNASE1L1P49184 302 aa17.48■□□□□ 0.39
HMG20B-213ENST00000488973 IL13RA1P78552 427 aa17.48■□□□□ 0.39
HMG20B-213ENST00000488973 INSM1Q01101 510 aaPredicted RBP17.48■□□□□ 0.39
HMG20B-213ENST00000488973 BIKQ13323 160 aa17.48■□□□□ 0.39
HMG20B-213ENST00000488973 RAB30Q15771 203 aa17.48■□□□□ 0.39
HMG20B-213ENST00000488973 CDNFQ49AH0 187 aa17.48■□□□□ 0.39
HMG20B-213ENST00000488973 LDLRAD3Q86YD5 345 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms