RNA–Protein interactions for RNA: ENST00000488905.1

HDAC6-231, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 492 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-231ENST00000488905 PTTG3PQ9NZH4 202 aa15.46■□□□□ 0.07
HDAC6-231ENST00000488905 VSX1Q9NZR4 365 aaPredicted RBP15.46■□□□□ 0.07
HDAC6-231ENST00000488905 ARMCX1Q9P291 453 aa15.46■□□□□ 0.07
HDAC6-231ENST00000488905 COA3Q9Y2R0 106 aaPredicted RBP15.46■□□□□ 0.07
HDAC6-231ENST00000488905 POLR1DQ9Y2S0 133 aa15.46■□□□□ 0.07
HDAC6-231ENST00000488905 NME4O00746 187 aa15.45■□□□□ 0.06
HDAC6-231ENST00000488905 IMPA2O14732 288 aa15.45■□□□□ 0.06
HDAC6-231ENST00000488905 GSTA4O15217 222 aa15.45■□□□□ 0.06
HDAC6-231ENST00000488905 RER1O15258 196 aa15.45■□□□□ 0.06
HDAC6-231ENST00000488905 KHDRBS3O75525 346 aaKnown RBP15.45■□□□□ 0.06
HDAC6-231ENST00000488905 SASH3O75995 380 aa15.45■□□□□ 0.06
HDAC6-231ENST00000488905 NDUFB2O95178 105 aa15.45■□□□□ 0.06
HDAC6-231ENST00000488905 SERPINA1P01009 418 aa15.45■□□□□ 0.06
HDAC6-231ENST00000488905 RNASE1P07998 156 aaKnown RBP15.45■□□□□ 0.06
HDAC6-231ENST00000488905 RPS2P15880 293 aaKnown RBP15.45■□□□□ 0.06
HDAC6-231ENST00000488905 H2AFXP16104 143 aaPredicted RBP15.45■□□□□ 0.06
HDAC6-231ENST00000488905 SLC7A2P52569 658 aa15.45■□□□□ 0.06
HDAC6-231ENST00000488905 BAMBIQ13145 260 aa15.45■□□□□ 0.06
HDAC6-231ENST00000488905 HLXQ14774 488 aaPredicted RBP15.45■□□□□ 0.06
HDAC6-231ENST00000488905 GPR139Q6DWJ6 353 aa15.45■□□□□ 0.06
HDAC6-231ENST00000488905 ADCK1Q86TW2 530 aa15.45■□□□□ 0.06
HDAC6-231ENST00000488905 PARP8Q8N3A8 854 aa15.45■□□□□ 0.06
HDAC6-231ENST00000488905 ATG16L2Q8NAA4 619 aa15.45■□□□□ 0.06
HDAC6-231ENST00000488905 ZNF420Q8TAQ5 688 aaPredicted RBP15.45■□□□□ 0.06
HDAC6-231ENST00000488905 MEGF10Q96KG7 1140 aa15.45■□□□□ 0.06
HDAC6-231ENST00000488905 SSBP3Q9BWW4 388 aaPredicted RBP15.45■□□□□ 0.06
HDAC6-231ENST00000488905 ZNF696Q9H7X3 374 aa15.45■□□□□ 0.06
HDAC6-231ENST00000488905 NRIP3Q9NQ35 241 aa15.45■□□□□ 0.06
HDAC6-231ENST00000488905 IL20RAQ9UHF4 553 aa15.45■□□□□ 0.06
HDAC6-231ENST00000488905 SIGLEC7Q9Y286 467 aa15.45■□□□□ 0.06
HDAC6-231ENST00000488905 PAX2Q02962 417 aa15.44■□□□□ 0.06
HDAC6-231ENST00000488905 PAX8Q06710 450 aa15.44■□□□□ 0.06
HDAC6-231ENST00000488905 OR2T2Q6IF00 324 aa15.44■□□□□ 0.06
HDAC6-231ENST00000488905 SLC27A4Q6P1M0 643 aa15.44■□□□□ 0.06
HDAC6-231ENST00000488905 PTCHD4Q6ZW05 846 aa15.44■□□□□ 0.06
HDAC6-231ENST00000488905 TSEN54Q7Z6J9 526 aaKnown RBP15.44■□□□□ 0.06
HDAC6-231ENST00000488905 OR8G5Q8NG78 346 aa15.44■□□□□ 0.06
HDAC6-231ENST00000488905 OR5L1Q8NGL2 311 aa15.44■□□□□ 0.06
HDAC6-231ENST00000488905 RP9Q8TA86 221 aaKnown RBP15.44■□□□□ 0.06
HDAC6-231ENST00000488905 SLC25A28Q96A46 364 aa15.44■□□□□ 0.06
HDAC6-231ENST00000488905 RSRC1Q96IZ7 334 aaKnown RBP15.44■□□□□ 0.06
HDAC6-231ENST00000488905 MS4A7Q9GZW8 240 aaPredicted RBP15.44■□□□□ 0.06
HDAC6-231ENST00000488905 NUAK2Q9H093 628 aa15.44■□□□□ 0.06
HDAC6-231ENST00000488905 ENPP4Q9Y6X5 453 aa15.44■□□□□ 0.06
HDAC6-231ENST00000488905 A0A1W2PRQ8 180 aa15.43■□□□□ 0.06
HDAC6-231ENST00000488905 SOCS2O14508 198 aa15.43■□□□□ 0.06
HDAC6-231ENST00000488905 ZNF205O95201 554 aa15.43■□□□□ 0.06
HDAC6-231ENST00000488905 CYB5R3P00387 301 aaPredicted RBP15.43■□□□□ 0.06
HDAC6-231ENST00000488905 WNT2P09544 360 aa15.43■□□□□ 0.06
HDAC6-231ENST00000488905 PPIAL4GP0DN37 164 aa15.43■□□□□ 0.06
HDAC6-231ENST00000488905 IGHV4-38-2P0DP08 117 aa15.43■□□□□ 0.06
HDAC6-231ENST00000488905 CPT2P23786 658 aa15.43■□□□□ 0.06
HDAC6-231ENST00000488905 CD80P33681 288 aa15.43■□□□□ 0.06
HDAC6-231ENST00000488905 SRP9P49458 86 aaKnown RBP15.43■□□□□ 0.06
HDAC6-231ENST00000488905 GSK3BP49841 420 aa15.43■□□□□ 0.06
HDAC6-231ENST00000488905 FXYD6P3P58550 94 aa15.43■□□□□ 0.06
HDAC6-231ENST00000488905 DGCR6Q14129 220 aa15.43■□□□□ 0.06
HDAC6-231ENST00000488905 FGD3Q5JSP0 725 aa15.43■□□□□ 0.06
HDAC6-231ENST00000488905 BTNL3Q6UXE8 466 aa15.43■□□□□ 0.06
HDAC6-231ENST00000488905 KLBQ86Z14 1044 aa15.43■□□□□ 0.06
HDAC6-231ENST00000488905 OR52E2Q8NGJ4 325 aa15.43■□□□□ 0.06
HDAC6-231ENST00000488905 OR13G1Q8NGZ3 307 aa15.43■□□□□ 0.06
HDAC6-231ENST00000488905 APOBEC3DQ96AK3 386 aaPredicted RBP15.43■□□□□ 0.06
HDAC6-231ENST00000488905 ZNF582Q96NG8 517 aaPredicted RBP15.43■□□□□ 0.06
HDAC6-231ENST00000488905 COQ7Q99807 217 aa15.43■□□□□ 0.06
HDAC6-231ENST00000488905 HDHD2Q9H0R4 259 aa15.43■□□□□ 0.06
HDAC6-231ENST00000488905 LHFPL6Q9Y693 200 aa15.43■□□□□ 0.06
HDAC6-231ENST00000488905 TRAV40A0A0B4J280 105 aa15.42■□□□□ 0.06
HDAC6-231ENST00000488905 IGHV2-70DA0A0C4DH43 119 aa15.42■□□□□ 0.06
HDAC6-231ENST00000488905 IQCF6A8MYZ5 107 aa15.42■□□□□ 0.06
HDAC6-231ENST00000488905 CLDN34H7C241 214 aa15.42■□□□□ 0.06
HDAC6-231ENST00000488905 MLNRO43193 412 aa15.42■□□□□ 0.06
HDAC6-231ENST00000488905 KCNAB3O43448 404 aa15.42■□□□□ 0.06
HDAC6-231ENST00000488905 PTP4A3O75365 173 aa15.42■□□□□ 0.06
HDAC6-231ENST00000488905 GPANK1O95872 356 aa15.42■□□□□ 0.06
HDAC6-231ENST00000488905 H1F0P07305 194 aaKnown RBP15.42■□□□□ 0.06
HDAC6-231ENST00000488905 OMPP47874 163 aa15.42■□□□□ 0.06
HDAC6-231ENST00000488905 GNB2P62879 340 aa15.42■□□□□ 0.06
HDAC6-231ENST00000488905 KCNMB1Q16558 191 aa15.42■□□□□ 0.06
HDAC6-231ENST00000488905 C8orf82Q6P1X6 216 aaPredicted RBP15.42■□□□□ 0.06
HDAC6-231ENST00000488905 PGM2L1Q6PCE3 622 aa15.42■□□□□ 0.06
HDAC6-231ENST00000488905 LRRN1Q6UXK5 716 aa15.42■□□□□ 0.06
HDAC6-231ENST00000488905 C9orf139Q6ZV77 190 aa15.42■□□□□ 0.06
HDAC6-231ENST00000488905 BHLHE23Q8NDY6 225 aa15.42■□□□□ 0.06
HDAC6-231ENST00000488905 FAM162AQ96A26 154 aa15.42■□□□□ 0.06
HDAC6-231ENST00000488905 DACT3Q96B18 629 aaPredicted RBP15.42■□□□□ 0.06
HDAC6-231ENST00000488905 UPRTQ96BW1 309 aa15.42■□□□□ 0.06
HDAC6-231ENST00000488905 SLC30A2Q9BRI3 323 aa15.42■□□□□ 0.06
HDAC6-231ENST00000488905 UNKLQ9H9P5 680 aaKnown RBP15.42■□□□□ 0.06
HDAC6-231ENST00000488905 TMEM165Q9HC07 324 aa15.42■□□□□ 0.06
HDAC6-231ENST00000488905 MIOXQ9UGB7 285 aa15.42■□□□□ 0.06
HDAC6-231ENST00000488905 IER3IP1Q9Y5U9 82 aa15.42■□□□□ 0.06
HDAC6-231ENST00000488905 IGHV3OR16-10A0A075B7F0 116 aa15.41■□□□□ 0.06
HDAC6-231ENST00000488905 F5H5P2 479 aa15.41■□□□□ 0.06
HDAC6-231ENST00000488905 H0YL77 283 aa15.41■□□□□ 0.06
HDAC6-231ENST00000488905 TXNDC12O95881 172 aa15.41■□□□□ 0.06
HDAC6-231ENST00000488905 PLATP00750 562 aa15.41■□□□□ 0.06
HDAC6-231ENST00000488905 COX4I1P13073 169 aa15.41■□□□□ 0.06
HDAC6-231ENST00000488905 MTNR1AP48039 350 aa15.41■□□□□ 0.06
HDAC6-231ENST00000488905 RPS6KA3P51812 740 aa15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 126.9 ms