RNA–Protein interactions for RNA: ENST00000488591.1

CXCL12-207, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 2

Gene CXCL12, Length 596 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-207ENST00000488591 MYOZ1Q9NP98 299 aaPredicted RBP12.92□□□□□ -0.34
CXCL12-207ENST00000488591 TAAR3PQ9P1P4 343 aa12.92□□□□□ -0.34
CXCL12-207ENST00000488591 COMMD3-BMI1R4GMX3 469 aa12.92□□□□□ -0.34
CXCL12-207ENST00000488591 F8P00451 2351 aa12.92□□□□□ -0.34
CXCL12-207ENST00000488591 RTTNQ86VV8 2226 aa12.91□□□□□ -0.34
CXCL12-207ENST00000488591 TRIM64A6NGJ6 449 aa12.91□□□□□ -0.34
CXCL12-207ENST00000488591 TRIM64BA6NI03 449 aa12.91□□□□□ -0.34
CXCL12-207ENST00000488591 SAC3D1A6NKF1 404 aa12.91□□□□□ -0.34
CXCL12-207ENST00000488591 H3BNX3 289 aa12.91□□□□□ -0.34
CXCL12-207ENST00000488591 H7C1Q1 480 aa12.91□□□□□ -0.34
CXCL12-207ENST00000488591 J3QW42 95 aa12.91□□□□□ -0.34
CXCL12-207ENST00000488591 MITFO75030 526 aaPredicted RBP12.91□□□□□ -0.34
CXCL12-207ENST00000488591 IGHV3-13P01766 116 aa12.91□□□□□ -0.34
CXCL12-207ENST00000488591 ALDH3B1P43353 468 aa12.91□□□□□ -0.34
CXCL12-207ENST00000488591 PDLIM4P50479 330 aa12.91□□□□□ -0.34
CXCL12-207ENST00000488591 TNK1Q13470 666 aa12.91□□□□□ -0.34
CXCL12-207ENST00000488591 KLHL12Q53G59 568 aa12.91□□□□□ -0.34
CXCL12-207ENST00000488591 TEX30Q5JUR7 227 aa12.91□□□□□ -0.34
CXCL12-207ENST00000488591 MBNL2Q5VZF2 373 aaKnown RBP12.91□□□□□ -0.34
CXCL12-207ENST00000488591 KLF14Q8TD94 323 aaPredicted RBP12.91□□□□□ -0.34
CXCL12-207ENST00000488591 FAM168AQ92567 244 aa12.91□□□□□ -0.34
CXCL12-207ENST00000488591 STMN2Q93045 179 aa12.91□□□□□ -0.34
CXCL12-207ENST00000488591 SPTSSAQ969W0 71 aa12.91□□□□□ -0.34
CXCL12-207ENST00000488591 APOBEC3DQ96AK3 386 aaPredicted RBP12.91□□□□□ -0.34
CXCL12-207ENST00000488591 INTS14Q96SY0 518 aa12.91□□□□□ -0.34
CXCL12-207ENST00000488591 HCAR1Q9BXC0 346 aa12.91□□□□□ -0.34
CXCL12-207ENST00000488591 S100A14Q9HCY8 104 aa12.91□□□□□ -0.34
CXCL12-207ENST00000488591 MYEF2Q9P2K5 600 aaKnown RBP12.91□□□□□ -0.34
CXCL12-207ENST00000488591 ORC6Q9Y5N6 252 aa12.91□□□□□ -0.34
CXCL12-207ENST00000488591 FLNAP21333 2647 aaKnown RBP12.9□□□□□ -0.34
CXCL12-207ENST00000488591 PLSCR5A0PG75 271 aa12.9□□□□□ -0.34
CXCL12-207ENST00000488591 SMAD7O15105 426 aaKnown RBP12.9□□□□□ -0.34
CXCL12-207ENST00000488591 PRODHO43272 600 aa12.9□□□□□ -0.34
CXCL12-207ENST00000488591 DBHP09172 617 aa12.9□□□□□ -0.34
CXCL12-207ENST00000488591 INHBBP09529 407 aa12.9□□□□□ -0.34
CXCL12-207ENST00000488591 LIPAP38571 399 aa12.9□□□□□ -0.34
CXCL12-207ENST00000488591 TPTEP56180 551 aa12.9□□□□□ -0.34
CXCL12-207ENST00000488591 RPS7P62081 194 aaKnown RBP12.9□□□□□ -0.34
CXCL12-207ENST00000488591 MAD2L1BPQ15013 274 aaPredicted RBP12.9□□□□□ -0.34
CXCL12-207ENST00000488591 TAF13Q15543 124 aa12.9□□□□□ -0.34
CXCL12-207ENST00000488591 PCK2Q16822 640 aa12.9□□□□□ -0.34
CXCL12-207ENST00000488591 ALKBH6Q3KRA9 238 aa12.9□□□□□ -0.34
CXCL12-207ENST00000488591 SLC35D3Q5M8T2 416 aa12.9□□□□□ -0.34
CXCL12-207ENST00000488591 LINC01590Q5TEZ4 76 aa12.9□□□□□ -0.34
CXCL12-207ENST00000488591 LYPD4Q6UWN0 246 aa12.9□□□□□ -0.34
CXCL12-207ENST00000488591 DNM1P46Q6ZS02 220 aa12.9□□□□□ -0.34
CXCL12-207ENST00000488591 CXXC5Q7LFL8 322 aaKnown RBP12.9□□□□□ -0.34
CXCL12-207ENST00000488591 SHFQ7M4L6 423 aa12.9□□□□□ -0.34
CXCL12-207ENST00000488591 DCXRQ7Z4W1 244 aa12.9□□□□□ -0.34
CXCL12-207ENST00000488591 ERI1Q8IV48 349 aaKnown RBP12.9□□□□□ -0.34
CXCL12-207ENST00000488591 ZCCHC24Q8N2G6 241 aaKnown RBP12.9□□□□□ -0.34
CXCL12-207ENST00000488591 ZNF525Q8N782 197 aa12.9□□□□□ -0.34
CXCL12-207ENST00000488591 CIB1Q99828 191 aa12.9□□□□□ -0.34
CXCL12-207ENST00000488591 TPK1Q9H3S4 243 aa12.9□□□□□ -0.34
CXCL12-207ENST00000488591 HINT3Q9NQE9 182 aaKnown RBP12.9□□□□□ -0.34
CXCL12-207ENST00000488591 DLL4Q9NR61 685 aa12.9□□□□□ -0.34
CXCL12-207ENST00000488591 CYSLTR2Q9NS75 346 aa12.9□□□□□ -0.34
CXCL12-207ENST00000488591 STARD10Q9Y365 291 aa12.9□□□□□ -0.34
CXCL12-207ENST00000488591 MED13LQ71F56 2210 aa12.9□□□□□ -0.34
CXCL12-207ENST00000488591 LOC390937A0A1W2PQ73 354 aa12.89□□□□□ -0.35
CXCL12-207ENST00000488591 ZAR1LA6NP61 321 aa12.89□□□□□ -0.35
CXCL12-207ENST00000488591 F5H5K5 113 aa12.89□□□□□ -0.35
CXCL12-207ENST00000488591 LY6HO94772 140 aa12.89□□□□□ -0.35
CXCL12-207ENST00000488591 NAT2P11245 290 aa12.89□□□□□ -0.35
CXCL12-207ENST00000488591 DAOP14920 347 aa12.89□□□□□ -0.35
CXCL12-207ENST00000488591 RPS27P42677 84 aaKnown RBP12.89□□□□□ -0.35
CXCL12-207ENST00000488591 PPP2R2BQ00005 443 aa12.89□□□□□ -0.35
CXCL12-207ENST00000488591 EIF2B1Q14232 305 aaKnown RBP12.89□□□□□ -0.35
CXCL12-207ENST00000488591 CARTPTQ16568 116 aa12.89□□□□□ -0.35
CXCL12-207ENST00000488591 PCGF3Q3KNV8 242 aa12.89□□□□□ -0.35
CXCL12-207ENST00000488591 ZMAT1Q5H9K5 638 aa12.89□□□□□ -0.35
CXCL12-207ENST00000488591 SLX4IPQ5VYV7 408 aa12.89□□□□□ -0.35
CXCL12-207ENST00000488591 OR6N2Q8NGY6 317 aa12.89□□□□□ -0.35
CXCL12-207ENST00000488591 ZMYND19Q96E35 227 aaPredicted RBP12.89□□□□□ -0.35
CXCL12-207ENST00000488591 MAP6Q96JE9 813 aa12.89□□□□□ -0.35
CXCL12-207ENST00000488591 REG4Q9BYZ8 158 aa12.89□□□□□ -0.35
CXCL12-207ENST00000488591 MARCH7Q9H992 704 aa12.89□□□□□ -0.35
CXCL12-207ENST00000488591 PNRC2Q9NPJ4 139 aaKnown RBP12.89□□□□□ -0.35
CXCL12-207ENST00000488591 CENPMQ9NSP4 180 aa12.89□□□□□ -0.35
CXCL12-207ENST00000488591 H2AFY2Q9P0M6 372 aaPredicted RBP12.89□□□□□ -0.35
CXCL12-207ENST00000488591 CGGBP1Q9UFW8 167 aaPredicted RBP12.89□□□□□ -0.35
CXCL12-207ENST00000488591 TMEFF2Q9UIK5 374 aaPredicted RBP12.89□□□□□ -0.35
CXCL12-207ENST00000488591 C17orf100A8MU93 164 aa12.88□□□□□ -0.35
CXCL12-207ENST00000488591 RNF223E7ERA6 249 aa12.88□□□□□ -0.35
CXCL12-207ENST00000488591 NDUFS8O00217 210 aa12.88□□□□□ -0.35
CXCL12-207ENST00000488591 TIMM8AO60220 97 aaPredicted RBP12.88□□□□□ -0.35
CXCL12-207ENST00000488591 ACSM4P0C7M7 580 aa12.88□□□□□ -0.35
CXCL12-207ENST00000488591 SLC25A16P16260 332 aa12.88□□□□□ -0.35
CXCL12-207ENST00000488591 MPV17P39210 176 aa12.88□□□□□ -0.35
CXCL12-207ENST00000488591 SLC15A1P46059 708 aa12.88□□□□□ -0.35
CXCL12-207ENST00000488591 ZNF81P51508 661 aa12.88□□□□□ -0.35
CXCL12-207ENST00000488591 GABPB1Q06547 395 aaPredicted RBP12.88□□□□□ -0.35
CXCL12-207ENST00000488591 LCN1P1Q5VSP4 162 aa12.88□□□□□ -0.35
CXCL12-207ENST00000488591 BIVMQ86UB2 503 aa12.88□□□□□ -0.35
CXCL12-207ENST00000488591 ZNF540Q8NDQ6 660 aa12.88□□□□□ -0.35
CXCL12-207ENST00000488591 UBASH3BQ8TF42 649 aa12.88□□□□□ -0.35
CXCL12-207ENST00000488591 CMBLQ96DG6 245 aa12.88□□□□□ -0.35
CXCL12-207ENST00000488591 SLAMF6Q96DU3 332 aa12.88□□□□□ -0.35
CXCL12-207ENST00000488591 COX4I2Q96KJ9 171 aa12.88□□□□□ -0.35
CXCL12-207ENST00000488591 COPS4Q9BT78 406 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms