RNA–Protein interactions for RNA: ENST00000488072.1

SHROOM1-205, Transcript of shroom family member 1, humanhuman

TSL 2

Gene SHROOM1, Length 423 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-205ENST00000488072 MOV10Q9HCE1 1003 aaKnown RBP14.73□□□□□ -0.05
SHROOM1-205ENST00000488072 CBLN4Q9NTU7 201 aa14.73□□□□□ -0.05
SHROOM1-205ENST00000488072 DUSP13Q9UII6 198 aa14.73□□□□□ -0.05
SHROOM1-205ENST00000488072 FBXL3Q9UKT7 428 aa14.73□□□□□ -0.05
SHROOM1-205ENST00000488072 N6AMT1Q9Y5N5 214 aa14.73□□□□□ -0.05
SHROOM1-205ENST00000488072 GMPPBQ9Y5P6 360 aa14.73□□□□□ -0.05
SHROOM1-205ENST00000488072 PRRC2AP48634 2157 aaKnown RBP14.73□□□□□ -0.05
SHROOM1-205ENST00000488072 LOC100130705A0A1B0GUX0 176 aa14.72□□□□□ -0.05
SHROOM1-205ENST00000488072 PRODHO43272 600 aa14.72□□□□□ -0.05
SHROOM1-205ENST00000488072 ENTPD6O75354 484 aa14.72□□□□□ -0.05
SHROOM1-205ENST00000488072 PTHP01270 115 aa14.72□□□□□ -0.05
SHROOM1-205ENST00000488072 SLC2A1P11166 492 aa14.72□□□□□ -0.05
SHROOM1-205ENST00000488072 GABRB1P18505 474 aa14.72□□□□□ -0.05
SHROOM1-205ENST00000488072 ALDH3B1P43353 468 aa14.72□□□□□ -0.05
SHROOM1-205ENST00000488072 PRKXP51817 358 aa14.72□□□□□ -0.05
SHROOM1-205ENST00000488072 SLC34A1Q06495 639 aa14.72□□□□□ -0.05
SHROOM1-205ENST00000488072 TEX30Q5JUR7 227 aa14.72□□□□□ -0.05
SHROOM1-205ENST00000488072 ZNF544Q6NX49 715 aa14.72□□□□□ -0.05
SHROOM1-205ENST00000488072 ENTHD1Q8IYW4 607 aa14.72□□□□□ -0.05
SHROOM1-205ENST00000488072 MRPL24Q96A35 216 aaKnown RBP14.72□□□□□ -0.05
SHROOM1-205ENST00000488072 DOK1Q99704 481 aa14.72□□□□□ -0.05
SHROOM1-205ENST00000488072 COQ7Q99807 217 aa14.72□□□□□ -0.05
SHROOM1-205ENST00000488072 C1orf198Q9H425 327 aa14.72□□□□□ -0.05
SHROOM1-205ENST00000488072 ZNF442Q9H7R0 627 aa14.72□□□□□ -0.05
SHROOM1-205ENST00000488072 DCLRE1BQ9H816 532 aa14.72□□□□□ -0.05
SHROOM1-205ENST00000488072 SMPD3Q9NY59 655 aaPredicted RBP14.72□□□□□ -0.05
SHROOM1-205ENST00000488072 CMAHPQ9Y471 501 aa14.72□□□□□ -0.05
SHROOM1-205ENST00000488072 ANKRD17O75179 2603 aaKnown RBP14.71□□□□□ -0.05
SHROOM1-205ENST00000488072 ABHD16AO95870 558 aa14.71□□□□□ -0.05
SHROOM1-205ENST00000488072 ACSM4P0C7M7 580 aa14.71□□□□□ -0.05
SHROOM1-205ENST00000488072 COX5BP10606 129 aa14.71□□□□□ -0.05
SHROOM1-205ENST00000488072 PTH2RP49190 550 aa14.71□□□□□ -0.05
SHROOM1-205ENST00000488072 PPP1CBP62140 327 aa14.71□□□□□ -0.05
SHROOM1-205ENST00000488072 HLXQ14774 488 aaPredicted RBP14.71□□□□□ -0.05
SHROOM1-205ENST00000488072 SLC35D3Q5M8T2 416 aa14.71□□□□□ -0.05
SHROOM1-205ENST00000488072 AGAP6Q5VW22 663 aa14.71□□□□□ -0.05
SHROOM1-205ENST00000488072 NXNL2Q5VZ03 156 aa14.71□□□□□ -0.05
SHROOM1-205ENST00000488072 RGS7BPQ6MZT1 257 aaPredicted RBP14.71□□□□□ -0.05
SHROOM1-205ENST00000488072 THEM6Q8WUY1 208 aa14.71□□□□□ -0.05
SHROOM1-205ENST00000488072 APH1BQ8WW43 257 aa14.71□□□□□ -0.05
SHROOM1-205ENST00000488072 CYGBQ8WWM9 190 aa14.71□□□□□ -0.05
SHROOM1-205ENST00000488072 ATF6BQ99941 703 aa14.71□□□□□ -0.05
SHROOM1-205ENST00000488072 WACQ9BTA9 647 aa14.71□□□□□ -0.05
SHROOM1-205ENST00000488072 HDHD2Q9H0R4 259 aa14.71□□□□□ -0.05
SHROOM1-205ENST00000488072 PLK3Q9H4B4 646 aa14.71□□□□□ -0.05
SHROOM1-205ENST00000488072 RNPEPL1Q9HAU8 725 aa14.71□□□□□ -0.05
SHROOM1-205ENST00000488072 ADGRL4Q9HBW9 690 aa14.71□□□□□ -0.05
SHROOM1-205ENST00000488072 PTTG3PQ9NZH4 202 aa14.71□□□□□ -0.05
SHROOM1-205ENST00000488072 ENOPH1Q9UHY7 261 aa14.71□□□□□ -0.05
SHROOM1-205ENST00000488072 IGHV4-39P01824 125 aa14.7□□□□□ -0.06
SHROOM1-205ENST00000488072 NUDT6P53370 316 aa14.7□□□□□ -0.06
SHROOM1-205ENST00000488072 CDC42P60953 191 aa14.7□□□□□ -0.06
SHROOM1-205ENST00000488072 SNAI3Q3KNW1 292 aa14.7□□□□□ -0.06
SHROOM1-205ENST00000488072 LRRN1Q6UXK5 716 aa14.7□□□□□ -0.06
SHROOM1-205ENST00000488072 SSX6Q7RTT6 188 aa14.7□□□□□ -0.06
SHROOM1-205ENST00000488072 OR51G2Q8NGK0 314 aa14.7□□□□□ -0.06
SHROOM1-205ENST00000488072 OR8J1Q8NGP2 316 aa14.7□□□□□ -0.06
SHROOM1-205ENST00000488072 OTOSQ8NHW6 89 aa14.7□□□□□ -0.06
SHROOM1-205ENST00000488072 IPCEF1Q8WWN9 437 aaPredicted RBP14.7□□□□□ -0.06
SHROOM1-205ENST00000488072 NINJ1Q92982 152 aa14.7□□□□□ -0.06
SHROOM1-205ENST00000488072 PIGTQ969N2 578 aa14.7□□□□□ -0.06
SHROOM1-205ENST00000488072 MBD6Q96DN6 1003 aa14.7□□□□□ -0.06
SHROOM1-205ENST00000488072 MARS2Q96GW9 593 aaKnown RBP14.7□□□□□ -0.06
SHROOM1-205ENST00000488072 TBX5Q99593 518 aa14.7□□□□□ -0.06
SHROOM1-205ENST00000488072 TPK1Q9H3S4 243 aa14.7□□□□□ -0.06
SHROOM1-205ENST00000488072 AMBNQ9NP70 447 aa14.7□□□□□ -0.06
SHROOM1-205ENST00000488072 IMPAD1Q9NX62 359 aa14.7□□□□□ -0.06
SHROOM1-205ENST00000488072 SLCO1C1Q9NYB5 712 aa14.7□□□□□ -0.06
SHROOM1-205ENST00000488072 H0YHG0 523 aa14.69□□□□□ -0.06
SHROOM1-205ENST00000488072 SLC16A6O15403 523 aa14.69□□□□□ -0.06
SHROOM1-205ENST00000488072 ADRA2AP08913 450 aa14.69□□□□□ -0.06
SHROOM1-205ENST00000488072 NAT2P11245 290 aa14.69□□□□□ -0.06
SHROOM1-205ENST00000488072 ALOX5APP20292 161 aa14.69□□□□□ -0.06
SHROOM1-205ENST00000488072 PCSK6P29122 969 aa14.69□□□□□ -0.06
SHROOM1-205ENST00000488072 RAD52P43351 418 aa14.69□□□□□ -0.06
SHROOM1-205ENST00000488072 ADARB1P78563 741 aaKnown RBP14.69□□□□□ -0.06
SHROOM1-205ENST00000488072 TESK1Q15569 626 aa14.69□□□□□ -0.06
SHROOM1-205ENST00000488072 EFNB3Q15768 340 aa14.69□□□□□ -0.06
SHROOM1-205ENST00000488072 SMN1Q16637 294 aaKnown RBP14.69□□□□□ -0.06
SHROOM1-205ENST00000488072 SLC16A9Q7RTY1 509 aa14.69□□□□□ -0.06
SHROOM1-205ENST00000488072 WFDC11Q8NEX6 87 aa14.69□□□□□ -0.06
SHROOM1-205ENST00000488072 KLF14Q8TD94 323 aaPredicted RBP14.69□□□□□ -0.06
SHROOM1-205ENST00000488072 SORCS2Q96PQ0 1159 aa14.69□□□□□ -0.06
SHROOM1-205ENST00000488072 COPS4Q9BT78 406 aa14.69□□□□□ -0.06
SHROOM1-205ENST00000488072 PRRG3Q9BZD7 231 aa14.69□□□□□ -0.06
SHROOM1-205ENST00000488072 DDX28Q9NUL7 540 aaKnown RBP14.69□□□□□ -0.06
SHROOM1-205ENST00000488072 ZNF701Q9NV72 531 aaPredicted RBP14.69□□□□□ -0.06
SHROOM1-205ENST00000488072 BEX4Q9NWD9 120 aaPredicted RBP14.69□□□□□ -0.06
SHROOM1-205ENST00000488072 H2AFY2Q9P0M6 372 aaPredicted RBP14.69□□□□□ -0.06
SHROOM1-205ENST00000488072 TAAR3PQ9P1P4 343 aa14.69□□□□□ -0.06
SHROOM1-205ENST00000488072 ZNF319Q9P2F9 582 aa14.69□□□□□ -0.06
SHROOM1-205ENST00000488072 EIF3KQ9UBQ5 218 aaKnown RBP14.69□□□□□ -0.06
SHROOM1-205ENST00000488072 SPEF1Q9Y4P9 236 aa14.69□□□□□ -0.06
SHROOM1-205ENST00000488072 MYO9AB2RTY4 2548 aa14.68□□□□□ -0.06
SHROOM1-205ENST00000488072 B9A039 149 aa14.68□□□□□ -0.06
SHROOM1-205ENST00000488072 LILRA1O75019 489 aa14.68□□□□□ -0.06
SHROOM1-205ENST00000488072 LCATP04180 440 aa14.68□□□□□ -0.06
SHROOM1-205ENST00000488072 GNAO1P09471 354 aa14.68□□□□□ -0.06
SHROOM1-205ENST00000488072 HTR1FP30939 366 aa14.68□□□□□ -0.06
SHROOM1-205ENST00000488072 OPRL1P41146 370 aa14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms