RNA–Protein interactions for RNA: ENST00000487989.1

PFKFB3-213, Transcript of 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3, humanhuman

TSL 2

Gene PFKFB3, Length 661 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFKFB3-213ENST00000487989 DCLRE1CQ96SD1 692 aaKnown RBP12.1□□□□□ -0.47
PFKFB3-213ENST00000487989 PITX2Q99697 317 aa12.1□□□□□ -0.47
PFKFB3-213ENST00000487989 COQ7Q99807 217 aa12.1□□□□□ -0.47
PFKFB3-213ENST00000487989 NMNAT2Q9BZQ4 307 aa12.1□□□□□ -0.47
PFKFB3-213ENST00000487989 TUBG2Q9NRH3 451 aa12.1□□□□□ -0.47
PFKFB3-213ENST00000487989 KIF17Q9P2E2 1029 aa12.1□□□□□ -0.47
PFKFB3-213ENST00000487989 RTTNQ86VV8 2226 aa12.1□□□□□ -0.47
PFKFB3-213ENST00000487989 FAM183AA6NL82 134 aa12.09□□□□□ -0.47
PFKFB3-213ENST00000487989 COL8A2P25067 703 aa12.09□□□□□ -0.47
PFKFB3-213ENST00000487989 FASP25445 335 aa12.09□□□□□ -0.47
PFKFB3-213ENST00000487989 GIFP27352 417 aa12.09□□□□□ -0.47
PFKFB3-213ENST00000487989 RGS6P49758 472 aa12.09□□□□□ -0.47
PFKFB3-213ENST00000487989 ZNF81P51508 661 aa12.09□□□□□ -0.47
PFKFB3-213ENST00000487989 CCL8P80075 99 aa12.09□□□□□ -0.47
PFKFB3-213ENST00000487989 ECH1Q13011 328 aa12.09□□□□□ -0.47
PFKFB3-213ENST00000487989 PSG7Q13046 419 aa12.09□□□□□ -0.47
PFKFB3-213ENST00000487989 TMEM249Q2WGJ8 235 aa12.09□□□□□ -0.47
PFKFB3-213ENST00000487989 PCGF3Q3KNV8 242 aa12.09□□□□□ -0.47
PFKFB3-213ENST00000487989 TMEM255AQ5JRV8 349 aa12.09□□□□□ -0.47
PFKFB3-213ENST00000487989 LYPD4Q6UWN0 246 aa12.09□□□□□ -0.47
PFKFB3-213ENST00000487989 ZNF511Q8NB15 262 aa12.09□□□□□ -0.47
PFKFB3-213ENST00000487989 OR6K6Q8NGW6 343 aa12.09□□□□□ -0.47
PFKFB3-213ENST00000487989 OR5K1Q8NHB7 308 aa12.09□□□□□ -0.47
PFKFB3-213ENST00000487989 GTF3AQ92664 365 aaKnown RBP12.09□□□□□ -0.47
PFKFB3-213ENST00000487989 RDH5Q92781 318 aa12.09□□□□□ -0.47
PFKFB3-213ENST00000487989 DUS3LQ96G46 650 aaKnown RBP12.09□□□□□ -0.47
PFKFB3-213ENST00000487989 ATF6BQ99941 703 aa12.09□□□□□ -0.47
PFKFB3-213ENST00000487989 BPESC1Q9GZL8 116 aa12.09□□□□□ -0.47
PFKFB3-213ENST00000487989 POFUT1Q9H488 388 aa12.09□□□□□ -0.47
PFKFB3-213ENST00000487989 MED20Q9H944 212 aa12.09□□□□□ -0.47
PFKFB3-213ENST00000487989 WDR76Q9H967 626 aa12.09□□□□□ -0.47
PFKFB3-213ENST00000487989 NKIRAS2Q9NYR9 191 aa12.09□□□□□ -0.47
PFKFB3-213ENST00000487989 TLN2Q9Y4G6 2542 aa12.09□□□□□ -0.47
PFKFB3-213ENST00000487989 G3V2T6 193 aa12.08□□□□□ -0.48
PFKFB3-213ENST00000487989 TPD52L2O43399 206 aaKnown RBP12.08□□□□□ -0.48
PFKFB3-213ENST00000487989 TIMM8AO60220 97 aaPredicted RBP12.08□□□□□ -0.48
PFKFB3-213ENST00000487989 NCR1O76036 304 aa12.08□□□□□ -0.48
PFKFB3-213ENST00000487989 HMGN1P05114 100 aa12.08□□□□□ -0.48
PFKFB3-213ENST00000487989 PAICSP22234 425 aaKnown RBP12.08□□□□□ -0.48
PFKFB3-213ENST00000487989 LIPAP38571 399 aa12.08□□□□□ -0.48
PFKFB3-213ENST00000487989 RPS27P42677 84 aaKnown RBP12.08□□□□□ -0.48
PFKFB3-213ENST00000487989 MMP15P51511 669 aa12.08□□□□□ -0.48
PFKFB3-213ENST00000487989 BLVRAP53004 296 aa12.08□□□□□ -0.48
PFKFB3-213ENST00000487989 CDK5Q00535 292 aa12.08□□□□□ -0.48
PFKFB3-213ENST00000487989 RIN1Q13671 783 aa12.08□□□□□ -0.48
PFKFB3-213ENST00000487989 TSTQ16762 297 aaKnown RBP12.08□□□□□ -0.48
PFKFB3-213ENST00000487989 RSPO1Q2MKA7 263 aaPredicted RBP12.08□□□□□ -0.48
PFKFB3-213ENST00000487989 FAHD1Q6P587 224 aa12.08□□□□□ -0.48
PFKFB3-213ENST00000487989 HIPK1Q86Z02 1210 aa12.08□□□□□ -0.48
PFKFB3-213ENST00000487989 OR5L1Q8NGL2 311 aa12.08□□□□□ -0.48
PFKFB3-213ENST00000487989 DNAJC9Q8WXX5 260 aa12.08□□□□□ -0.48
PFKFB3-213ENST00000487989 PTP4A1Q93096 173 aa12.08□□□□□ -0.48
PFKFB3-213ENST00000487989 CMBLQ96DG6 245 aa12.08□□□□□ -0.48
PFKFB3-213ENST00000487989 MAP6Q96JE9 813 aa12.08□□□□□ -0.48
PFKFB3-213ENST00000487989 HCAR1Q9BXC0 346 aa12.08□□□□□ -0.48
PFKFB3-213ENST00000487989 PNRC2Q9NPJ4 139 aaKnown RBP12.08□□□□□ -0.48
PFKFB3-213ENST00000487989 PAPOLBQ9NRJ5 636 aaKnown RBP12.08□□□□□ -0.48
PFKFB3-213ENST00000487989 CYSLTR2Q9NS75 346 aa12.08□□□□□ -0.48
PFKFB3-213ENST00000487989 DECR2Q9NUI1 292 aa12.08□□□□□ -0.48
PFKFB3-213ENST00000487989 PTTG3PQ9NZH4 202 aa12.08□□□□□ -0.48
PFKFB3-213ENST00000487989 COMMD3-BMI1R4GMX3 469 aa12.08□□□□□ -0.48
PFKFB3-213ENST00000487989 CSPG4Q6UVK1 2322 aa12.08□□□□□ -0.48
PFKFB3-213ENST00000487989 IGHV4-61A0A0C4DH41 118 aa12.07□□□□□ -0.48
PFKFB3-213ENST00000487989 PRR23D1E9PI22 279 aaPredicted RBP12.07□□□□□ -0.48
PFKFB3-213ENST00000487989 F5H5K5 113 aa12.07□□□□□ -0.48
PFKFB3-213ENST00000487989 J3QW42 95 aa12.07□□□□□ -0.48
PFKFB3-213ENST00000487989 ZNF593O00488 134 aaPredicted RBP12.07□□□□□ -0.48
PFKFB3-213ENST00000487989 EBAG9O00559 213 aa12.07□□□□□ -0.48
PFKFB3-213ENST00000487989 SURF4O15260 269 aa12.07□□□□□ -0.48
PFKFB3-213ENST00000487989 SPRY3O43610 288 aa12.07□□□□□ -0.48
PFKFB3-213ENST00000487989 CD5LO43866 347 aa12.07□□□□□ -0.48
PFKFB3-213ENST00000487989 SPARCP09486 303 aa12.07□□□□□ -0.48
PFKFB3-213ENST00000487989 PRR23D2P0DMB1 279 aaPredicted RBP12.07□□□□□ -0.48
PFKFB3-213ENST00000487989 FCGR1AP12314 374 aa12.07□□□□□ -0.48
PFKFB3-213ENST00000487989 ENTPD1P49961 510 aa12.07□□□□□ -0.48
PFKFB3-213ENST00000487989 DAPP51397 102 aa12.07□□□□□ -0.48
PFKFB3-213ENST00000487989 MRPS11P82912 194 aaKnown RBP12.07□□□□□ -0.48
PFKFB3-213ENST00000487989 TMEM236Q5W0B7 351 aa12.07□□□□□ -0.48
PFKFB3-213ENST00000487989 DCXRQ7Z4W1 244 aa12.07□□□□□ -0.48
PFKFB3-213ENST00000487989 AMIGO2Q86SJ2 522 aa12.07□□□□□ -0.48
PFKFB3-213ENST00000487989 LRTOMTQ8WZ04 291 aa12.07□□□□□ -0.48
PFKFB3-213ENST00000487989 YIPF5Q969M3 257 aa12.07□□□□□ -0.48
PFKFB3-213ENST00000487989 APOBEC3DQ96AK3 386 aaPredicted RBP12.07□□□□□ -0.48
PFKFB3-213ENST00000487989 HAVCR1Q96D42 359 aa12.07□□□□□ -0.48
PFKFB3-213ENST00000487989 PLEKHA8Q96JA3 519 aa12.07□□□□□ -0.48
PFKFB3-213ENST00000487989 TEX12Q9BXU0 123 aa12.07□□□□□ -0.48
PFKFB3-213ENST00000487989 CHODLQ9H9P2 273 aa12.07□□□□□ -0.48
PFKFB3-213ENST00000487989 MSL2Q9HCI7 577 aa12.07□□□□□ -0.48
PFKFB3-213ENST00000487989 CGGBP1Q9UFW8 167 aaPredicted RBP12.07□□□□□ -0.48
PFKFB3-213ENST00000487989 PURGQ9UJV8 347 aaKnown RBP12.07□□□□□ -0.48
PFKFB3-213ENST00000487989 CR1P17927 2039 aa12.06□□□□□ -0.48
PFKFB3-213ENST00000487989 ZSCAN5BA6NJL1 495 aa12.06□□□□□ -0.48
PFKFB3-213ENST00000487989 INAFM1C9JVW0 142 aa12.06□□□□□ -0.48
PFKFB3-213ENST00000487989 CDC14BO60729 498 aa12.06□□□□□ -0.48
PFKFB3-213ENST00000487989 IGHV1-46P01743 117 aa12.06□□□□□ -0.48
PFKFB3-213ENST00000487989 ACSM4P0C7M7 580 aa12.06□□□□□ -0.48
PFKFB3-213ENST00000487989 PSKH1P11801 424 aa12.06□□□□□ -0.48
PFKFB3-213ENST00000487989 RAC2P15153 192 aa12.06□□□□□ -0.48
PFKFB3-213ENST00000487989 ZNF23P17027 643 aa12.06□□□□□ -0.48
PFKFB3-213ENST00000487989 HOXB4P17483 251 aaPredicted RBP12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms