RNA–Protein interactions for RNA: ENST00000487709.1

HMGB1P36-201, Transcript of high mobility group box 1 pseudogene 36, humanhuman

BASIC

Gene HMGB1P36, Length 576 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P36-201ENST00000487709 MMAAQ8IVH4 418 aaKnown RBP2.26□□□□□ -2.05
HMGB1P36-201ENST00000487709 ZNF695Q8IW36 515 aa2.26□□□□□ -2.05
HMGB1P36-201ENST00000487709 LGI3Q8N145 548 aa2.26□□□□□ -2.05
HMGB1P36-201ENST00000487709 SNX31Q8N9S9 440 aa2.26□□□□□ -2.05
HMGB1P36-201ENST00000487709 OR6Q1Q8NGQ2 317 aa2.26□□□□□ -2.05
HMGB1P36-201ENST00000487709 ZNF461Q8TAF7 563 aa2.26□□□□□ -2.05
HMGB1P36-201ENST00000487709 NARS2Q96I59 477 aaKnown RBP2.26□□□□□ -2.05
HMGB1P36-201ENST00000487709 C11orf70Q9BRQ4 267 aa2.26□□□□□ -2.05
HMGB1P36-201ENST00000487709 MTG1Q9BT17 334 aaPredicted RBP2.26□□□□□ -2.05
HMGB1P36-201ENST00000487709 ZYG11BQ9C0D3 744 aa2.26□□□□□ -2.05
HMGB1P36-201ENST00000487709 NTN4Q9HB63 628 aa2.26□□□□□ -2.05
HMGB1P36-201ENST00000487709 CCNB1IP1Q9NPC3 277 aa2.26□□□□□ -2.05
HMGB1P36-201ENST00000487709 TMEM9BQ9NQ34 198 aa2.26□□□□□ -2.05
HMGB1P36-201ENST00000487709 SIRT7Q9NRC8 400 aa2.26□□□□□ -2.05
HMGB1P36-201ENST00000487709 VANGL2Q9ULK5 521 aa2.26□□□□□ -2.05
HMGB1P36-201ENST00000487709 SLC17A4Q9Y2C5 497 aa2.26□□□□□ -2.05
HMGB1P36-201ENST00000487709 KBTBD11-OT1A0A1B0GTJ5 212 aa2.25□□□□□ -2.05
HMGB1P36-201ENST00000487709 A6NDN8 102 aa2.25□□□□□ -2.05
HMGB1P36-201ENST00000487709 EIF4E2O60573 245 aaKnown RBP2.25□□□□□ -2.05
HMGB1P36-201ENST00000487709 CLDN11O75508 207 aa2.25□□□□□ -2.05
HMGB1P36-201ENST00000487709 FOXH1O75593 365 aa2.25□□□□□ -2.05
HMGB1P36-201ENST00000487709 SLC22A5O76082 557 aa2.25□□□□□ -2.05
HMGB1P36-201ENST00000487709 OR2F2O95006 317 aa2.25□□□□□ -2.05
HMGB1P36-201ENST00000487709 CCNB2O95067 398 aa2.25□□□□□ -2.05
HMGB1P36-201ENST00000487709 YIF1AO95070 293 aa2.25□□□□□ -2.05
HMGB1P36-201ENST00000487709 APCSP02743 223 aa2.25□□□□□ -2.05
HMGB1P36-201ENST00000487709 ZNF688P0C7X2 276 aa2.25□□□□□ -2.05
HMGB1P36-201ENST00000487709 IL1RNP18510 177 aa2.25□□□□□ -2.05
HMGB1P36-201ENST00000487709 BCKDHBP21953 392 aa2.25□□□□□ -2.05
HMGB1P36-201ENST00000487709 IL32P24001 234 aa2.25□□□□□ -2.05
HMGB1P36-201ENST00000487709 STOMP27105 288 aa2.25□□□□□ -2.05
HMGB1P36-201ENST00000487709 TALDO1P37837 337 aa2.25□□□□□ -2.05
HMGB1P36-201ENST00000487709 MAGEA1P43355 309 aa2.25□□□□□ -2.05
HMGB1P36-201ENST00000487709 RAB9AP51151 201 aa2.25□□□□□ -2.05
HMGB1P36-201ENST00000487709 CDKN2DP55273 166 aa2.25□□□□□ -2.05
HMGB1P36-201ENST00000487709 ZNF726P1Q15940 193 aa2.25□□□□□ -2.05
HMGB1P36-201ENST00000487709 MRPL23Q16540 153 aaKnown RBP2.25□□□□□ -2.05
HMGB1P36-201ENST00000487709 AVPI1Q5T686 147 aa2.25□□□□□ -2.05
HMGB1P36-201ENST00000487709 ZNF880Q6PDB4 577 aa2.25□□□□□ -2.05
HMGB1P36-201ENST00000487709 CEMP1Q6PRD7 247 aaPredicted RBP2.25□□□□□ -2.05
HMGB1P36-201ENST00000487709 FAM71AQ8IYT1 594 aa2.25□□□□□ -2.05
HMGB1P36-201ENST00000487709 COX18Q8N8Q8 333 aa2.25□□□□□ -2.05
HMGB1P36-201ENST00000487709 C15orf56Q8N910 161 aa2.25□□□□□ -2.05
HMGB1P36-201ENST00000487709 OR9G4Q8NGQ1 327 aa2.25□□□□□ -2.05
HMGB1P36-201ENST00000487709 NUBPLQ8TB37 319 aa2.25□□□□□ -2.05
HMGB1P36-201ENST00000487709 PIFOQ8TCI5 191 aa2.25□□□□□ -2.05
HMGB1P36-201ENST00000487709 C15orf40Q8WUR7 153 aa2.25□□□□□ -2.05
HMGB1P36-201ENST00000487709 L3HYPDHQ96EM0 354 aa2.25□□□□□ -2.05
HMGB1P36-201ENST00000487709 DOK1Q99704 481 aa2.25□□□□□ -2.05
HMGB1P36-201ENST00000487709 TBL1YQ9BQ87 522 aa2.25□□□□□ -2.05
HMGB1P36-201ENST00000487709 ACTR3CQ9C0K3 210 aaPredicted RBP2.25□□□□□ -2.05
HMGB1P36-201ENST00000487709 IQCGQ9H095 443 aaKnown RBP2.25□□□□□ -2.05
HMGB1P36-201ENST00000487709 CLSTN2Q9H4D0 955 aa2.25□□□□□ -2.05
HMGB1P36-201ENST00000487709 GEMIN7Q9H840 131 aaKnown RBP2.25□□□□□ -2.05
HMGB1P36-201ENST00000487709 EDA2RQ9HAV5 297 aa2.25□□□□□ -2.05
HMGB1P36-201ENST00000487709 MED4Q9NPJ6 270 aa2.25□□□□□ -2.05
HMGB1P36-201ENST00000487709 MRPL22Q9NWU5 206 aaKnown RBP2.25□□□□□ -2.05
HMGB1P36-201ENST00000487709 CLN8Q9UBY8 286 aa2.25□□□□□ -2.05
HMGB1P36-201ENST00000487709 LRP4O75096 1905 aa2.25□□□□□ -2.05
HMGB1P36-201ENST00000487709 NSD2O96028 1365 aa2.24□□□□□ -2.05
HMGB1P36-201ENST00000487709 SLIT3O75094 1523 aa2.24□□□□□ -2.05
HMGB1P36-201ENST00000487709 IGLV2-18A0A075B6J9 118 aa2.24□□□□□ -2.05
HMGB1P36-201ENST00000487709 IGHV1OR15-9A0A0B4J2B8 117 aa2.24□□□□□ -2.05
HMGB1P36-201ENST00000487709 LRRIQ4A6NIV6 560 aa2.24□□□□□ -2.05
HMGB1P36-201ENST00000487709 FAM25EA8MYX2 175 aa2.24□□□□□ -2.05
HMGB1P36-201ENST00000487709 L7N2F9 121 aa2.24□□□□□ -2.05
HMGB1P36-201ENST00000487709 M0R3G1 203 aa2.24□□□□□ -2.05
HMGB1P36-201ENST00000487709 BPY2O14599 106 aa2.24□□□□□ -2.05
HMGB1P36-201ENST00000487709 RBBP9O75884 186 aa2.24□□□□□ -2.05
HMGB1P36-201ENST00000487709 HPRT1P00492 218 aa2.24□□□□□ -2.05
HMGB1P36-201ENST00000487709 HBE1P02100 147 aa2.24□□□□□ -2.05
HMGB1P36-201ENST00000487709 EIF4EP06730 217 aaKnown RBP2.24□□□□□ -2.05
HMGB1P36-201ENST00000487709 MUC1P15941 1255 aaPredicted RBP2.24□□□□□ -2.05
HMGB1P36-201ENST00000487709 GALP22466 123 aa2.24□□□□□ -2.05
HMGB1P36-201ENST00000487709 MYL9P24844 172 aa2.24□□□□□ -2.05
HMGB1P36-201ENST00000487709 RND2P52198 227 aa2.24□□□□□ -2.05
HMGB1P36-201ENST00000487709 PITPNAQ00169 270 aa2.24□□□□□ -2.05
HMGB1P36-201ENST00000487709 GBE1Q04446 702 aa2.24□□□□□ -2.05
HMGB1P36-201ENST00000487709 LOXL1Q08397 574 aaPredicted RBP2.24□□□□□ -2.05
HMGB1P36-201ENST00000487709 KIR2DS1Q14954 304 aa2.24□□□□□ -2.05
HMGB1P36-201ENST00000487709 HSDL1Q3SXM5 330 aa2.24□□□□□ -2.05
HMGB1P36-201ENST00000487709 FBXW12Q6X9E4 464 aa2.24□□□□□ -2.05
HMGB1P36-201ENST00000487709 SHISA6Q6ZSJ9 500 aa2.24□□□□□ -2.05
HMGB1P36-201ENST00000487709 NEGR1Q7Z3B1 354 aa2.24□□□□□ -2.05
HMGB1P36-201ENST00000487709 MICU2Q8IYU8 434 aa2.24□□□□□ -2.05
HMGB1P36-201ENST00000487709 COMMD1Q8N668 190 aa2.24□□□□□ -2.05
HMGB1P36-201ENST00000487709 RNF182Q8N6D2 247 aa2.24□□□□□ -2.05
HMGB1P36-201ENST00000487709 CCDC148Q8NFR7 591 aa2.24□□□□□ -2.05
HMGB1P36-201ENST00000487709 OR11H7Q8NGC8 314 aa2.24□□□□□ -2.05
HMGB1P36-201ENST00000487709 OR52E2Q8NGJ4 325 aa2.24□□□□□ -2.05
HMGB1P36-201ENST00000487709 OR10G6Q8NH81 332 aa2.24□□□□□ -2.05
HMGB1P36-201ENST00000487709 LILRB4Q8NHJ6 448 aa2.24□□□□□ -2.05
HMGB1P36-201ENST00000487709 PTX4Q96A99 478 aa2.24□□□□□ -2.05
HMGB1P36-201ENST00000487709 FLYWCH2Q96CP2 140 aaKnown RBP2.24□□□□□ -2.05
HMGB1P36-201ENST00000487709 JSRP1Q96MG2 331 aaPredicted RBP2.24□□□□□ -2.05
HMGB1P36-201ENST00000487709 SULT4A1Q9BR01 284 aa2.24□□□□□ -2.05
HMGB1P36-201ENST00000487709 RSG1Q9BU20 258 aa2.24□□□□□ -2.05
HMGB1P36-201ENST00000487709 ANKRA2Q9H9E1 313 aa2.24□□□□□ -2.05
HMGB1P36-201ENST00000487709 C12orf10Q9HB07 376 aa2.24□□□□□ -2.05
HMGB1P36-201ENST00000487709 MRM3Q9HC36 420 aaKnown RBP2.24□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms