RNA–Protein interactions for RNA: ENST00000487401.1

SREBF1-215, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 477 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-215ENST00000487401 FANK1Q8TC84 345 aa10.52□□□□□ -0.73
SREBF1-215ENST00000487401 BCAS4Q8TDM0 211 aa10.52□□□□□ -0.73
SREBF1-215ENST00000487401 DHRS1Q96LJ7 313 aa10.52□□□□□ -0.73
SREBF1-215ENST00000487401 GPA33Q99795 319 aa10.52□□□□□ -0.73
SREBF1-215ENST00000487401 SUCNR1Q9BXA5 334 aa10.52□□□□□ -0.73
SREBF1-215ENST00000487401 NSRP1Q9H0G5 558 aaKnown RBP10.52□□□□□ -0.73
SREBF1-215ENST00000487401 SRA1Q9HD15 236 aaKnown RBP10.52□□□□□ -0.73
SREBF1-215ENST00000487401 PTTG3PQ9NZH4 202 aa10.52□□□□□ -0.73
SREBF1-215ENST00000487401 IL19Q9UHD0 177 aa10.52□□□□□ -0.73
SREBF1-215ENST00000487401 ATPIF1Q9UII2 106 aa10.52□□□□□ -0.73
SREBF1-215ENST00000487401 MAGEL2Q9UJ55 1249 aa10.52□□□□□ -0.73
SREBF1-215ENST00000487401 PPP1R3CQ9UQK1 317 aa10.52□□□□□ -0.73
SREBF1-215ENST00000487401 TRIM77I1YAP6 450 aa10.51□□□□□ -0.73
SREBF1-215ENST00000487401 J3QW42 95 aa10.51□□□□□ -0.73
SREBF1-215ENST00000487401 OR10H3O60404 316 aa10.51□□□□□ -0.73
SREBF1-215ENST00000487401 GADD45GO95257 159 aa10.51□□□□□ -0.73
SREBF1-215ENST00000487401 IGHV2-70P01814 119 aa10.51□□□□□ -0.73
SREBF1-215ENST00000487401 DBHP09172 617 aa10.51□□□□□ -0.73
SREBF1-215ENST00000487401 FPR2P25090 351 aa10.51□□□□□ -0.73
SREBF1-215ENST00000487401 NOS3P29474 1203 aa10.51□□□□□ -0.73
SREBF1-215ENST00000487401 FXYD6P3P58550 94 aa10.51□□□□□ -0.73
SREBF1-215ENST00000487401 SLC36A3Q495N2 470 aa10.51□□□□□ -0.73
SREBF1-215ENST00000487401 SAMD4BQ5PRF9 694 aaKnown RBP10.51□□□□□ -0.73
SREBF1-215ENST00000487401 OR2T2Q6IF00 324 aa10.51□□□□□ -0.73
SREBF1-215ENST00000487401 LEG1Q6P5S2 330 aa10.51□□□□□ -0.73
SREBF1-215ENST00000487401 Q6ZR03 302 aa10.51□□□□□ -0.73
SREBF1-215ENST00000487401 LRRC28Q86X40 367 aaPredicted RBP10.51□□□□□ -0.73
SREBF1-215ENST00000487401 ZNF283Q8N7M2 679 aa10.51□□□□□ -0.73
SREBF1-215ENST00000487401 SEMA6DQ8NFY4 1073 aa10.51□□□□□ -0.73
SREBF1-215ENST00000487401 OR13G1Q8NGZ3 307 aa10.51□□□□□ -0.73
SREBF1-215ENST00000487401 ITLN1Q8WWA0 313 aa10.51□□□□□ -0.73
SREBF1-215ENST00000487401 APOBEC3DQ96AK3 386 aaPredicted RBP10.51□□□□□ -0.73
SREBF1-215ENST00000487401 NSMCE2Q96MF7 247 aa10.51□□□□□ -0.73
SREBF1-215ENST00000487401 ZNF582Q96NG8 517 aaPredicted RBP10.51□□□□□ -0.73
SREBF1-215ENST00000487401 TSSK2Q96PF2 358 aa10.51□□□□□ -0.73
SREBF1-215ENST00000487401 OR2V2Q96R30 315 aa10.51□□□□□ -0.73
SREBF1-215ENST00000487401 COQ7Q99807 217 aa10.51□□□□□ -0.73
SREBF1-215ENST00000487401 FUZQ9BT04 418 aa10.51□□□□□ -0.73
SREBF1-215ENST00000487401 IFT27Q9BW83 186 aa10.51□□□□□ -0.73
SREBF1-215ENST00000487401 CDADC1Q9BWV3 514 aa10.51□□□□□ -0.73
SREBF1-215ENST00000487401 HDHD2Q9H0R4 259 aa10.51□□□□□ -0.73
SREBF1-215ENST00000487401 DCAF16Q9NXF7 216 aa10.51□□□□□ -0.73
SREBF1-215ENST00000487401 TMCC3Q9ULS5 477 aa10.51□□□□□ -0.73
SREBF1-215ENST00000487401 B9D1Q9UPM9 204 aa10.51□□□□□ -0.73
SREBF1-215ENST00000487401 PPIAL4EA0A075B759 164 aa10.5□□□□□ -0.73
SREBF1-215ENST00000487401 PPIAL4CA0A0B4J2A2 164 aa10.5□□□□□ -0.73
SREBF1-215ENST00000487401 PPIAL4DF5H284 164 aa10.5□□□□□ -0.73
SREBF1-215ENST00000487401 IFNL4K9M1U5 179 aa10.5□□□□□ -0.73
SREBF1-215ENST00000487401 SNX3O60493 162 aa10.5□□□□□ -0.73
SREBF1-215ENST00000487401 GPANK1O95872 356 aa10.5□□□□□ -0.73
SREBF1-215ENST00000487401 FABP3P05413 133 aa10.5□□□□□ -0.73
SREBF1-215ENST00000487401 PPIAL4FP0DN26 164 aa10.5□□□□□ -0.73
SREBF1-215ENST00000487401 ZFP36P26651 326 aaKnown RBP10.5□□□□□ -0.73
SREBF1-215ENST00000487401 ERFP50548 548 aa10.5□□□□□ -0.73
SREBF1-215ENST00000487401 HILS1P60008 231 aa10.5□□□□□ -0.73
SREBF1-215ENST00000487401 BTG1P62324 171 aa10.5□□□□□ -0.73
SREBF1-215ENST00000487401 HNRNPA0Q13151 305 aaKnown RBP10.5□□□□□ -0.73
SREBF1-215ENST00000487401 HLXQ14774 488 aaPredicted RBP10.5□□□□□ -0.73
SREBF1-215ENST00000487401 MEP1BQ16820 701 aa10.5□□□□□ -0.73
SREBF1-215ENST00000487401 TMEM155Q4W5P6 130 aa10.5□□□□□ -0.73
SREBF1-215ENST00000487401 CORO6Q6QEF8 472 aa10.5□□□□□ -0.73
SREBF1-215ENST00000487401 FBXW12Q6X9E4 464 aa10.5□□□□□ -0.73
SREBF1-215ENST00000487401 OR8G5Q8NG78 346 aa10.5□□□□□ -0.73
SREBF1-215ENST00000487401 OR4K13Q8NH42 304 aa10.5□□□□□ -0.73
SREBF1-215ENST00000487401 GNPDA2Q8TDQ7 276 aa10.5□□□□□ -0.73
SREBF1-215ENST00000487401 GCDHQ92947 438 aaPredicted RBP10.5□□□□□ -0.73
SREBF1-215ENST00000487401 CDRT15Q96T59 188 aa10.5□□□□□ -0.73
SREBF1-215ENST00000487401 NMNAT3Q96T66 252 aa10.5□□□□□ -0.73
SREBF1-215ENST00000487401 PITX2Q99697 317 aa10.5□□□□□ -0.73
SREBF1-215ENST00000487401 SLC6A7Q99884 636 aa10.5□□□□□ -0.73
SREBF1-215ENST00000487401 RBM4Q9BWF3 364 aaKnown RBP10.5□□□□□ -0.73
SREBF1-215ENST00000487401 OR52D1Q9H346 318 aa10.5□□□□□ -0.73
SREBF1-215ENST00000487401 PATZ1Q9HBE1 687 aaKnown RBP10.5□□□□□ -0.73
SREBF1-215ENST00000487401 OPN4Q9UHM6 478 aa10.5□□□□□ -0.73
SREBF1-215ENST00000487401 LHFPL6Q9Y693 200 aa10.5□□□□□ -0.73
SREBF1-215ENST00000487401 MALRD1Q5VYJ5 2156 aa10.5□□□□□ -0.73
SREBF1-215ENST00000487401 IGLV1-36A0A0B4J1U3 117 aa10.49□□□□□ -0.73
SREBF1-215ENST00000487401 DCTN6O00399 190 aa10.49□□□□□ -0.73
SREBF1-215ENST00000487401 ARPC3O15145 178 aa10.49□□□□□ -0.73
SREBF1-215ENST00000487401 IDH3BO43837 385 aa10.49□□□□□ -0.73
SREBF1-215ENST00000487401 HLA-DQA2P01906 255 aa10.49□□□□□ -0.73
SREBF1-215ENST00000487401 HSD17B1P14061 328 aa10.49□□□□□ -0.73
SREBF1-215ENST00000487401 HIST1H1CP16403 213 aaKnown RBP10.49□□□□□ -0.73
SREBF1-215ENST00000487401 SELEP16581 610 aa10.49□□□□□ -0.73
SREBF1-215ENST00000487401 FPR3P25089 353 aa10.49□□□□□ -0.73
SREBF1-215ENST00000487401 MSX2P35548 267 aaPredicted RBP10.49□□□□□ -0.73
SREBF1-215ENST00000487401 MDH2P40926 338 aaKnown RBP10.49□□□□□ -0.73
SREBF1-215ENST00000487401 SRP9P49458 86 aaKnown RBP10.49□□□□□ -0.73
SREBF1-215ENST00000487401 HIST1H3AP68431 136 aa10.49□□□□□ -0.73
SREBF1-215ENST00000487401 ECH1Q13011 328 aa10.49□□□□□ -0.73
SREBF1-215ENST00000487401 ZMYND11Q15326 602 aa10.49□□□□□ -0.73
SREBF1-215ENST00000487401 HIST2H3PS2Q5TEC6 136 aa10.49□□□□□ -0.73
SREBF1-215ENST00000487401 RBMS3Q6XE24 437 aaKnown RBP10.49□□□□□ -0.73
SREBF1-215ENST00000487401 HIST2H3AQ71DI3 136 aa10.49□□□□□ -0.73
SREBF1-215ENST00000487401 PGAM4Q8N0Y7 254 aa10.49□□□□□ -0.73
SREBF1-215ENST00000487401 OR6V1Q8N148 313 aa10.49□□□□□ -0.73
SREBF1-215ENST00000487401 MUC20Q8N307 709 aaPredicted RBP10.49□□□□□ -0.73
SREBF1-215ENST00000487401 OR2AJ1Q8NGZ0 328 aa10.49□□□□□ -0.73
SREBF1-215ENST00000487401 FAM216AQ8WUB2 273 aa10.49□□□□□ -0.73
SREBF1-215ENST00000487401 MEGF10Q96KG7 1140 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms