RNA–Protein interactions for RNA: ENST00000487169.5

HDLBP-241, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 4,339 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-241ENST00000487169 SPINT2O43291 252 aa12.1□□□□□ -0.47
HDLBP-241ENST00000487169 SUMO3P55854 103 aaPredicted RBP12.1□□□□□ -0.47
HDLBP-241ENST00000487169 EIF3IQ13347 325 aaKnown RBP12.1□□□□□ -0.47
HDLBP-241ENST00000487169 FCN2Q15485 313 aa12.1□□□□□ -0.47
HDLBP-241ENST00000487169 RDH5Q92781 318 aa12.1□□□□□ -0.47
HDLBP-241ENST00000487169 SMIM19Q96E16 107 aa12.1□□□□□ -0.47
HDLBP-241ENST00000487169 hCG_1809904A0A1W2PP81 198 aa12.1□□□□□ -0.47
HDLBP-241ENST00000487169 A0A1W2PPE2 198 aa12.1□□□□□ -0.47
HDLBP-241ENST00000487169 A0A1W2PR64 198 aa12.1□□□□□ -0.47
HDLBP-241ENST00000487169 A0A1W2PRV1 198 aa12.1□□□□□ -0.47
HDLBP-241ENST00000487169 ASPDHA6ND91 283 aa12.1□□□□□ -0.47
HDLBP-241ENST00000487169 ARRDC5A6NEK1 342 aa12.1□□□□□ -0.47
HDLBP-241ENST00000487169 TMEM235A6NFC5 223 aa12.1□□□□□ -0.47
HDLBP-241ENST00000487169 CYB5BO43169 146 aa12.1□□□□□ -0.47
HDLBP-241ENST00000487169 CALCBP10092 127 aa12.1□□□□□ -0.47
HDLBP-241ENST00000487169 B4GALT1P15291 398 aa12.1□□□□□ -0.47
HDLBP-241ENST00000487169 RAB6AP20340 208 aa12.1□□□□□ -0.47
HDLBP-241ENST00000487169 FOXC1Q12948 553 aa12.1□□□□□ -0.47
HDLBP-241ENST00000487169 TRA2AQ13595 282 aaKnown RBP eCLIP12.1□□□□□ -0.47
HDLBP-241ENST00000487169 POU4F3Q15319 338 aa12.1□□□□□ -0.47
HDLBP-241ENST00000487169 WIPI1Q5MNZ9 446 aaPredicted RBP12.1□□□□□ -0.47
HDLBP-241ENST00000487169 PRSS35Q8N3Z0 413 aa12.1□□□□□ -0.47
HDLBP-241ENST00000487169 OR51S1Q8NGJ8 323 aa12.1□□□□□ -0.47
HDLBP-241ENST00000487169 OR14K1Q8NGZ2 314 aa12.1□□□□□ -0.47
HDLBP-241ENST00000487169 OR52N5Q8NH56 324 aa12.1□□□□□ -0.47
HDLBP-241ENST00000487169 CNTNAP3BQ96NU0 1288 aa12.1□□□□□ -0.47
HDLBP-241ENST00000487169 CDX2Q99626 313 aaPredicted RBP12.1□□□□□ -0.47
HDLBP-241ENST00000487169 KCNJ15Q99712 375 aa12.1□□□□□ -0.47
HDLBP-241ENST00000487169 MED18Q9BUE0 208 aa12.1□□□□□ -0.47
HDLBP-241ENST00000487169 S1PR5Q9H228 398 aa12.1□□□□□ -0.47
HDLBP-241ENST00000487169 HRH4Q9H3N8 390 aa12.1□□□□□ -0.47
HDLBP-241ENST00000487169 NTN4Q9HB63 628 aa12.1□□□□□ -0.47
HDLBP-241ENST00000487169 A4GNTQ9UNA3 340 aa12.1□□□□□ -0.47
HDLBP-241ENST00000487169 HRO43593 1189 aa12.1□□□□□ -0.47
HDLBP-241ENST00000487169 NDUFB7P17568 137 aa12.1□□□□□ -0.47
HDLBP-241ENST00000487169 KITLGP21583 273 aa12.1□□□□□ -0.47
HDLBP-241ENST00000487169 FABP6P51161 128 aa12.1□□□□□ -0.47
HDLBP-241ENST00000487169 LGALS4P56470 323 aa12.1□□□□□ -0.47
HDLBP-241ENST00000487169 MFGE8Q08431 387 aaPredicted RBP12.1□□□□□ -0.47
HDLBP-241ENST00000487169 OR8G1Q15617 311 aa12.1□□□□□ -0.47
HDLBP-241ENST00000487169 TAF9Q16594 264 aa12.1□□□□□ -0.47
HDLBP-241ENST00000487169 ZNF468Q5VIY5 522 aaPredicted RBP12.1□□□□□ -0.47
HDLBP-241ENST00000487169 SHEQ5VZ18 495 aa12.1□□□□□ -0.47
HDLBP-241ENST00000487169 WDSUB1Q8N9V3 476 aa12.1□□□□□ -0.47
HDLBP-241ENST00000487169 KCNE4Q8WWG9 221 aa12.1□□□□□ -0.47
HDLBP-241ENST00000487169 FCRL1Q96LA6 429 aa12.1□□□□□ -0.47
HDLBP-241ENST00000487169 MOB1AQ9H8S9 216 aa12.1□□□□□ -0.47
HDLBP-241ENST00000487169 LUZP4Q9P127 313 aa12.1□□□□□ -0.47
HDLBP-241ENST00000487169 B9D1Q9UPM9 204 aa12.1□□□□□ -0.47
HDLBP-241ENST00000487169 A0A087WZY1 265 aa12.1□□□□□ -0.47
HDLBP-241ENST00000487169 KIR2DS1A0A191URI9 304 aa12.1□□□□□ -0.47
HDLBP-241ENST00000487169 FABP7O15540 132 aa12.1□□□□□ -0.47
HDLBP-241ENST00000487169 TUSC2O75896 110 aa12.1□□□□□ -0.47
HDLBP-241ENST00000487169 KIR2DS4P43632 304 aa12.1□□□□□ -0.47
HDLBP-241ENST00000487169 ZNF133P52736 654 aaPredicted RBP12.1□□□□□ -0.47
HDLBP-241ENST00000487169 TPBGQ13641 420 aa12.1□□□□□ -0.47
HDLBP-241ENST00000487169 KIR2DS1Q14954 304 aa12.1□□□□□ -0.47
HDLBP-241ENST00000487169 CEACAM16Q2WEN9 425 aa12.1□□□□□ -0.47
HDLBP-241ENST00000487169 OR10K2Q6IF99 312 aa12.1□□□□□ -0.47
HDLBP-241ENST00000487169 CCDC71Q8IV32 467 aaPredicted RBP12.1□□□□□ -0.47
HDLBP-241ENST00000487169 LYSMD2Q8IV50 215 aa12.1□□□□□ -0.47
HDLBP-241ENST00000487169 EXD3Q8N9H8 876 aa12.1□□□□□ -0.47
HDLBP-241ENST00000487169 OR2G2Q8NGZ5 317 aa12.1□□□□□ -0.47
HDLBP-241ENST00000487169 LRRC3BQ96PB8 259 aa12.1□□□□□ -0.47
HDLBP-241ENST00000487169 PLA2G3Q9NZ20 509 aa12.1□□□□□ -0.47
HDLBP-241ENST00000487169 MBD1Q9UIS9 605 aaPredicted RBP12.1□□□□□ -0.47
HDLBP-241ENST00000487169 ESPL1Q14674 2120 aa12.1□□□□□ -0.47
HDLBP-241ENST00000487169 KCNE1BA0A087WTH5 132 aa12.09□□□□□ -0.47
HDLBP-241ENST00000487169 TRGV8A0A0C4DH27 118 aa12.09□□□□□ -0.47
HDLBP-241ENST00000487169 A0A0U1RQK1 487 aa12.09□□□□□ -0.47
HDLBP-241ENST00000487169 POM121CA8CG34 1229 aa12.09□□□□□ -0.47
HDLBP-241ENST00000487169 SHISA8B8ZZ34 492 aa12.09□□□□□ -0.47
HDLBP-241ENST00000487169 H7C1Q1 480 aa12.09□□□□□ -0.47
HDLBP-241ENST00000487169 HS3ST1O14792 307 aa12.09□□□□□ -0.47
HDLBP-241ENST00000487169 HOXC4P09017 264 aaPredicted RBP12.09□□□□□ -0.47
HDLBP-241ENST00000487169 ELK1P19419 428 aa12.09□□□□□ -0.47
HDLBP-241ENST00000487169 RPS23P62266 143 aaKnown RBP12.09□□□□□ -0.47
HDLBP-241ENST00000487169 DMRTC1Q5HYR2 192 aa12.09□□□□□ -0.47
HDLBP-241ENST00000487169 ALKAL2Q6UX46 152 aa12.09□□□□□ -0.47
HDLBP-241ENST00000487169 LACC1Q8IV20 430 aa12.09□□□□□ -0.47
HDLBP-241ENST00000487169 OR52I2Q8NH67 350 aa12.09□□□□□ -0.47
HDLBP-241ENST00000487169 RBMXL1Q96E39 390 aaKnown RBP12.09□□□□□ -0.47
HDLBP-241ENST00000487169 PLA2G12AQ9BZM1 189 aa12.09□□□□□ -0.47
HDLBP-241ENST00000487169 ZCCHC4Q9H5U6 513 aa12.09□□□□□ -0.47
HDLBP-241ENST00000487169 GPATCH2Q9NW75 528 aa12.09□□□□□ -0.47
HDLBP-241ENST00000487169 IL20Q9NYY1 176 aa12.09□□□□□ -0.47
HDLBP-241ENST00000487169 PTTG3PQ9NZH4 202 aa12.09□□□□□ -0.47
HDLBP-241ENST00000487169 PROCRQ9UNN8 238 aa12.09□□□□□ -0.47
HDLBP-241ENST00000487169 CASP8AP2Q9UKL3 1982 aa12.09□□□□□ -0.47
HDLBP-241ENST00000487169 FER1L6Q2WGJ9 1857 aa12.09□□□□□ -0.47
HDLBP-241ENST00000487169 GABARAPH6UMI1 98 aa12.09□□□□□ -0.47
HDLBP-241ENST00000487169 TNFSF11O14788 317 aa12.09□□□□□ -0.47
HDLBP-241ENST00000487169 TBX19O60806 448 aa12.09□□□□□ -0.47
HDLBP-241ENST00000487169 CLDN1O95832 211 aa12.09□□□□□ -0.47
HDLBP-241ENST00000487169 FAM157BP0CG42 384 aa12.09□□□□□ -0.47
HDLBP-241ENST00000487169 CPEP16870 476 aa12.09□□□□□ -0.47
HDLBP-241ENST00000487169 SLC17A1Q14916 467 aa12.09□□□□□ -0.47
HDLBP-241ENST00000487169 TCTN1Q2MV58 587 aa12.09□□□□□ -0.47
HDLBP-241ENST00000487169 RNLSQ5VYX0 342 aa12.09□□□□□ -0.47
HDLBP-241ENST00000487169 WDR88Q6ZMY6 472 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms