RNA–Protein interactions for RNA: ENST00000487091.1

CLIP2-206, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 1 (best)

Gene CLIP2, Length 989 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-206ENST00000487091 Q6ZR03 302 aa16.16■□□□□ 0.18
CLIP2-206ENST00000487091 ZBTB46Q86UZ6 589 aa16.16■□□□□ 0.18
CLIP2-206ENST00000487091 ARHGAP24Q8N264 748 aa16.16■□□□□ 0.18
CLIP2-206ENST00000487091 LINC00471Q8N535 108 aa16.16■□□□□ 0.18
CLIP2-206ENST00000487091 TEX29Q8N6K0 151 aa16.16■□□□□ 0.18
CLIP2-206ENST00000487091 SLC26A10Q8NG04 563 aa16.16■□□□□ 0.18
CLIP2-206ENST00000487091 OR4K13Q8NH42 304 aa16.16■□□□□ 0.18
CLIP2-206ENST00000487091 REPIN1Q9BWE0 567 aaKnown RBP16.16■□□□□ 0.18
CLIP2-206ENST00000487091 G6PC2Q9NQR9 355 aa16.16■□□□□ 0.18
CLIP2-206ENST00000487091 PLPP2O43688 288 aa16.15■□□□□ 0.18
CLIP2-206ENST00000487091 GPANK1O95872 356 aa16.15■□□□□ 0.18
CLIP2-206ENST00000487091 TNFRSF1AP19438 455 aa16.15■□□□□ 0.18
CLIP2-206ENST00000487091 MEP1BQ16820 701 aa16.15■□□□□ 0.18
CLIP2-206ENST00000487091 SLC36A3Q495N2 470 aa16.15■□□□□ 0.18
CLIP2-206ENST00000487091 SPRNQ5BIV9 151 aa16.15■□□□□ 0.18
CLIP2-206ENST00000487091 FAHD2BQ6P2I3 314 aaPredicted RBP16.15■□□□□ 0.18
CLIP2-206ENST00000487091 PGBD2Q6P3X8 592 aa16.15■□□□□ 0.18
CLIP2-206ENST00000487091 FBXW12Q6X9E4 464 aa16.15■□□□□ 0.18
CLIP2-206ENST00000487091 OR2Z1Q8NG97 314 aa16.15■□□□□ 0.18
CLIP2-206ENST00000487091 APOBEC3DQ96AK3 386 aaPredicted RBP16.15■□□□□ 0.18
CLIP2-206ENST00000487091 FAHD2AQ96GK7 314 aa16.15■□□□□ 0.18
CLIP2-206ENST00000487091 GAL3ST1Q99999 423 aa16.15■□□□□ 0.18
CLIP2-206ENST00000487091 C19orf24Q9BVV8 132 aa16.15■□□□□ 0.18
CLIP2-206ENST00000487091 TRIM15Q9C019 465 aa16.15■□□□□ 0.18
CLIP2-206ENST00000487091 RPRD1BQ9NQG5 326 aaKnown RBP16.15■□□□□ 0.18
CLIP2-206ENST00000487091 IL19Q9UHD0 177 aa16.15■□□□□ 0.18
CLIP2-206ENST00000487091 LYVE1Q9Y5Y7 322 aa16.15■□□□□ 0.18
CLIP2-206ENST00000487091 OR6C68A6NDL8 312 aa16.14■□□□□ 0.17
CLIP2-206ENST00000487091 B2RBV5 119 aa16.14■□□□□ 0.17
CLIP2-206ENST00000487091 SURF4O15260 269 aa16.14■□□□□ 0.17
CLIP2-206ENST00000487091 PNPP00491 289 aa16.14■□□□□ 0.17
CLIP2-206ENST00000487091 MAGEA2P43356 314 aa16.14■□□□□ 0.17
CLIP2-206ENST00000487091 SRSF2Q01130 221 aaKnown RBP16.14■□□□□ 0.17
CLIP2-206ENST00000487091 SCGB2A2Q13296 93 aa16.14■□□□□ 0.17
CLIP2-206ENST00000487091 RPL13AP3Q6NVV1 102 aa16.14■□□□□ 0.17
CLIP2-206ENST00000487091 SHQ1Q6PI26 577 aaKnown RBP16.14■□□□□ 0.17
CLIP2-206ENST00000487091 CORO6Q6QEF8 472 aa16.14■□□□□ 0.17
CLIP2-206ENST00000487091 CYP2R1Q6VVX0 501 aa16.14■□□□□ 0.17
CLIP2-206ENST00000487091 ZSCAN2Q7Z7L9 614 aaPredicted RBP16.14■□□□□ 0.17
CLIP2-206ENST00000487091 FITM2Q8N6M3 262 aa16.14■□□□□ 0.17
CLIP2-206ENST00000487091 ZNF283Q8N7M2 679 aa16.14■□□□□ 0.17
CLIP2-206ENST00000487091 NSL1Q96IY1 281 aa16.14■□□□□ 0.17
CLIP2-206ENST00000487091 CCT8L2Q96SF2 557 aa16.14■□□□□ 0.17
CLIP2-206ENST00000487091 MUC13Q9H3R2 512 aa16.14■□□□□ 0.17
CLIP2-206ENST00000487091 METTL17Q9H7H0 456 aaPredicted RBP16.14■□□□□ 0.17
CLIP2-206ENST00000487091 TMEM106BQ9NUM4 274 aa16.14■□□□□ 0.17
CLIP2-206ENST00000487091 NPTNQ9Y639 398 aa16.14■□□□□ 0.17
CLIP2-206ENST00000487091 A0A0A6YYJ9 748 aa16.13■□□□□ 0.17
CLIP2-206ENST00000487091 J3QLI3 93 aa16.13■□□□□ 0.17
CLIP2-206ENST00000487091 TNFRSF11BO00300 401 aa16.13■□□□□ 0.17
CLIP2-206ENST00000487091 ATP6V1B2P21281 511 aa16.13■□□□□ 0.17
CLIP2-206ENST00000487091 ECH1Q13011 328 aa16.13■□□□□ 0.17
CLIP2-206ENST00000487091 RSPO1Q2MKA7 263 aaPredicted RBP16.13■□□□□ 0.17
CLIP2-206ENST00000487091 KRTAP27-1Q3LI81 207 aa16.13■□□□□ 0.17
CLIP2-206ENST00000487091 SLC18B1Q6NT16 456 aa16.13■□□□□ 0.17
CLIP2-206ENST00000487091 SLC27A4Q6P1M0 643 aa16.13■□□□□ 0.17
CLIP2-206ENST00000487091 COLCA1Q6ZS62 124 aa16.13■□□□□ 0.17
CLIP2-206ENST00000487091 SDR9C7Q8NEX9 313 aa16.13■□□□□ 0.17
CLIP2-206ENST00000487091 OR52L1Q8NGH7 329 aa16.13■□□□□ 0.17
CLIP2-206ENST00000487091 OR52E2Q8NGJ4 325 aa16.13■□□□□ 0.17
CLIP2-206ENST00000487091 POP5Q969H6 163 aaKnown RBP16.13■□□□□ 0.17
CLIP2-206ENST00000487091 MAGIXQ9H6Y5 334 aa16.13■□□□□ 0.17
CLIP2-206ENST00000487091 IL20Q9NYY1 176 aa16.13■□□□□ 0.17
CLIP2-206ENST00000487091 CYB5R1Q9UHQ9 305 aa16.13■□□□□ 0.17
CLIP2-206ENST00000487091 CDH10Q9Y6N8 788 aa16.13■□□□□ 0.17
CLIP2-206ENST00000487091 A0A0G2JMP0 313 aa16.12■□□□□ 0.17
CLIP2-206ENST00000487091 A0A0X1KG70 313 aa16.12■□□□□ 0.17
CLIP2-206ENST00000487091 ISPDA4D126 451 aa16.12■□□□□ 0.17
CLIP2-206ENST00000487091 IGHV2-70P01814 119 aa16.12■□□□□ 0.17
CLIP2-206ENST00000487091 GATA3P23771 443 aa16.12■□□□□ 0.17
CLIP2-206ENST00000487091 ERFP50548 548 aa16.12■□□□□ 0.17
CLIP2-206ENST00000487091 KHDRBS1Q07666 443 aaKnown RBP eCLIP16.12■□□□□ 0.17
CLIP2-206ENST00000487091 HLXQ14774 488 aaPredicted RBP16.12■□□□□ 0.17
CLIP2-206ENST00000487091 SLC35F1Q5T1Q4 408 aa16.12■□□□□ 0.17
CLIP2-206ENST00000487091 ZNF770Q6IQ21 691 aaPredicted RBP16.12■□□□□ 0.17
CLIP2-206ENST00000487091 OR8G5Q8NG78 346 aa16.12■□□□□ 0.17
CLIP2-206ENST00000487091 OR4M2Q8NGB6 313 aa16.12■□□□□ 0.17
CLIP2-206ENST00000487091 OR4C15Q8NGM1 316 aa16.12■□□□□ 0.17
CLIP2-206ENST00000487091 OR2AJ1Q8NGZ0 328 aa16.12■□□□□ 0.17
CLIP2-206ENST00000487091 ITLN1Q8WWA0 313 aa16.12■□□□□ 0.17
CLIP2-206ENST00000487091 DDOQ99489 341 aa16.12■□□□□ 0.17
CLIP2-206ENST00000487091 BTBD10Q9BSF8 475 aa16.12■□□□□ 0.17
CLIP2-206ENST00000487091 CDADC1Q9BWV3 514 aa16.12■□□□□ 0.17
CLIP2-206ENST00000487091 C1QTNF5Q9BXJ0 243 aa16.12■□□□□ 0.17
CLIP2-206ENST00000487091 EGLN3Q9H6Z9 239 aa16.12■□□□□ 0.17
CLIP2-206ENST00000487091 PTTG3PQ9NZH4 202 aa16.12■□□□□ 0.17
CLIP2-206ENST00000487091 KCNG2Q9UJ96 466 aa16.12■□□□□ 0.17
CLIP2-206ENST00000487091 PPP1R3CQ9UQK1 317 aa16.12■□□□□ 0.17
CLIP2-206ENST00000487091 ARHGAP32A7KAX9 2087 aa16.12■□□□□ 0.17
CLIP2-206ENST00000487091 FBN3Q75N90 2809 aa16.11■□□□□ 0.17
CLIP2-206ENST00000487091 TCRBV5S2A0A599 114 aa16.11■□□□□ 0.17
CLIP2-206ENST00000487091 IFNL4K9M1U5 179 aa16.11■□□□□ 0.17
CLIP2-206ENST00000487091 BHLHE40O14503 412 aa16.11■□□□□ 0.17
CLIP2-206ENST00000487091 HLA-DQA2P01906 255 aa16.11■□□□□ 0.17
CLIP2-206ENST00000487091 GGT2P36268 569 aa16.11■□□□□ 0.17
CLIP2-206ENST00000487091 TRIM25Q14258 630 aaKnown RBP16.11■□□□□ 0.17
CLIP2-206ENST00000487091 CLEC12AQ5QGZ9 265 aa16.11■□□□□ 0.17
CLIP2-206ENST00000487091 OR2T2Q6IF00 324 aa16.11■□□□□ 0.17
CLIP2-206ENST00000487091 LCN8Q6JVE9 175 aa16.11■□□□□ 0.17
CLIP2-206ENST00000487091 CFAP77Q6ZQR2 320 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms